RNA–Protein interactions for RNA: ENSMUST00000109578.7

Vps54-202, Transcript of Vacuolar protein sorting-associated protein 54, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Vps54, Length 4,273 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54-202ENSMUST00000109578 Adgrl1Q80TR1 1466 aa14.56□□□□□ -0.08
Vps54-202ENSMUST00000109578 Tmco5bQ80X59 307 aa14.56□□□□□ -0.08
Vps54-202ENSMUST00000109578 Htatsf1Q8BGC0 757 aa14.56□□□□□ -0.08
Vps54-202ENSMUST00000109578 Slc12a5Q91V14 1138 aa14.56□□□□□ -0.08
Vps54-202ENSMUST00000109578 Prdm2A2A7B5 1709 aaKnown RBP14.56□□□□□ -0.08
Vps54-202ENSMUST00000109578 Kiaa0556Q8C753 1610 aa14.56□□□□□ -0.08
Vps54-202ENSMUST00000109578 NinlQ6ZQ12 1394 aa14.56□□□□□ -0.08
Vps54-202ENSMUST00000109578 Cavin4A2AMM0 362 aa14.55□□□□□ -0.08
Vps54-202ENSMUST00000109578 Utp14aQ640M1 767 aaKnown RBP14.55□□□□□ -0.08
Vps54-202ENSMUST00000109578 Adgrl3Q80TS3 1537 aa14.55□□□□□ -0.08
Vps54-202ENSMUST00000109578 Gsto1O09131 240 aa14.55□□□□□ -0.08
Vps54-202ENSMUST00000109578 Atp2b2Q9R0K7 1198 aa14.55□□□□□ -0.08
Vps54-202ENSMUST00000109578 Ino80Q6ZPV2 1559 aa14.55□□□□□ -0.08
Vps54-202ENSMUST00000109578 Cdk19Q8BWD8 501 aa14.55□□□□□ -0.08
Vps54-202ENSMUST00000109578 Atp10aO54827 1508 aa14.55□□□□□ -0.08
Vps54-202ENSMUST00000109578 Plxnc1Q9QZC2 1574 aa14.55□□□□□ -0.08
Vps54-202ENSMUST00000109578 AampJ3QN89 436 aa14.55□□□□□ -0.08
Vps54-202ENSMUST00000109578 Phlpp2Q8BXA7 1320 aa14.54□□□□□ -0.08
Vps54-202ENSMUST00000109578 Mroh1E0CZ22 1640 aa14.54□□□□□ -0.08
Vps54-202ENSMUST00000109578 PalmQ9Z0P4 383 aa14.54□□□□□ -0.08
Vps54-202ENSMUST00000109578 Nrxn1Q9CS84 1514 aa14.54□□□□□ -0.08
Vps54-202ENSMUST00000109578 Ttc37F8VPK0 1563 aa14.54□□□□□ -0.08
Vps54-202ENSMUST00000109578 Prrc2bQ7TPM1 1486 aaKnown RBP14.54□□□□□ -0.08
Vps54-202ENSMUST00000109578 Cep170bQ80U49 1574 aa14.54□□□□□ -0.08
Vps54-202ENSMUST00000109578 G3bp1P97855 465 aaKnown RBP14.54□□□□□ -0.08
Vps54-202ENSMUST00000109578 Ankrd50F7BE84 1390 aa14.54□□□□□ -0.08
Vps54-202ENSMUST00000109578 Kif18aQ91WD7 886 aa14.53□□□□□ -0.08
Vps54-202ENSMUST00000109578 Cog6Q8R3I3 657 aa14.53□□□□□ -0.08
Vps54-202ENSMUST00000109578 Ift172Q6VH22 1749 aa14.53□□□□□ -0.08
Vps54-202ENSMUST00000109578 Eif2ak4Q9QZ05 1648 aa14.52□□□□□ -0.08
Vps54-202ENSMUST00000109578 Ttc21aQ8C0S4 1314 aa14.52□□□□□ -0.08
Vps54-202ENSMUST00000109578 Catsper2A2ARP9 588 aa14.52□□□□□ -0.08
Vps54-202ENSMUST00000109578 Kif2cQ922S8 721 aa14.52□□□□□ -0.08
Vps54-202ENSMUST00000109578 Knl1Q66JQ7 1612 aa14.52□□□□□ -0.08
Vps54-202ENSMUST00000109578 Birc3O08863 600 aa14.52□□□□□ -0.09
Vps54-202ENSMUST00000109578 Yeats2Q3TUF7 1407 aa14.51□□□□□ -0.09
Vps54-202ENSMUST00000109578 Znf316Q6PGE4 1016 aa14.51□□□□□ -0.09
Vps54-202ENSMUST00000109578 Dip2cE9PWR4 1557 aa14.51□□□□□ -0.09
Vps54-202ENSMUST00000109578 Hecw2Q6I6G8 1578 aa14.51□□□□□ -0.09
Vps54-202ENSMUST00000109578 Akap12Q9WTQ5 1684 aa14.51□□□□□ -0.09
Vps54-202ENSMUST00000109578 Med14A2ABV5 1459 aaKnown RBP14.5□□□□□ -0.09
Vps54-202ENSMUST00000109578 Q4VA45 678 aa14.5□□□□□ -0.09
Vps54-202ENSMUST00000109578 Antxr1Q9CZ52 562 aa14.5□□□□□ -0.09
Vps54-202ENSMUST00000109578 Cdc42bpgQ80UW5 1551 aa14.49□□□□□ -0.09
Vps54-202ENSMUST00000109578 Swt1Q9DBQ9 907 aa14.49□□□□□ -0.09
Vps54-202ENSMUST00000109578 Ncbp3Q8BZR9 615 aaKnown RBP14.49□□□□□ -0.09
Vps54-202ENSMUST00000109578 Plin1Q8CGN5 517 aa14.49□□□□□ -0.09
Vps54-202ENSMUST00000109578 SkilQ60665 675 aa14.49□□□□□ -0.09
Vps54-202ENSMUST00000109578 Map7O88735 730 aa14.48□□□□□ -0.09
Vps54-202ENSMUST00000109578 Plekhm2Q80TQ5 1018 aa14.48□□□□□ -0.09
Vps54-202ENSMUST00000109578 Q3UPC7 1272 aa14.47□□□□□ -0.09
Vps54-202ENSMUST00000109578 AdgbG3UZ78 1657 aa14.47□□□□□ -0.09
Vps54-202ENSMUST00000109578 Mcm10Q0VBD2 885 aa14.47□□□□□ -0.09
Vps54-202ENSMUST00000109578 AglF8VPN4 1532 aa14.47□□□□□ -0.09
Vps54-202ENSMUST00000109578 Terf2O35144 541 aa14.46□□□□□ -0.09
Vps54-202ENSMUST00000109578 RereQ80TZ9 1558 aa14.46□□□□□ -0.09
Vps54-202ENSMUST00000109578 Rfx1P48377 963 aa14.46□□□□□ -0.09
Vps54-202ENSMUST00000109578 Asxl2Q8BZ32 1370 aa14.46□□□□□ -0.09
Vps54-202ENSMUST00000109578 Arhgap23Q69ZH9 1483 aa14.46□□□□□ -0.1
Vps54-202ENSMUST00000109578 Nsfl1cQ9CZ44 370 aaKnown RBP14.46□□□□□ -0.1
Vps54-202ENSMUST00000109578 Cdc37l1Q9CZP7 335 aa14.46□□□□□ -0.1
Vps54-202ENSMUST00000109578 Brd1E9PZ26 1189 aaKnown RBP14.45□□□□□ -0.1
Vps54-202ENSMUST00000109578 Ccdc171E9Q1U1 1324 aa14.45□□□□□ -0.1
Vps54-202ENSMUST00000109578 Pik3r4Q8VD65 1358 aa14.45□□□□□ -0.1
Vps54-202ENSMUST00000109578 Ciz1Q8VEH2 845 aa14.45□□□□□ -0.1
Vps54-202ENSMUST00000109578 Afap1Q80YS6 731 aa14.45□□□□□ -0.1
Vps54-202ENSMUST00000109578 Vamp4O70480 141 aa14.44□□□□□ -0.1
Vps54-202ENSMUST00000109578 PtprmP28828 1452 aa14.44□□□□□ -0.1
Vps54-202ENSMUST00000109578 Dnttip2Q8R2M2 758 aaKnown RBP14.44□□□□□ -0.1
Vps54-202ENSMUST00000109578 FanciQ8K368 1330 aa14.44□□□□□ -0.1
Vps54-202ENSMUST00000109578 Hs1bp3Q3TC93 395 aa14.44□□□□□ -0.1
Vps54-202ENSMUST00000109578 GorabQ8BRM2 368 aa14.44□□□□□ -0.1
Vps54-202ENSMUST00000109578 Nsd3Q6P2L6 1439 aa14.43□□□□□ -0.1
Vps54-202ENSMUST00000109578 Gm156Q58A37 223 aa14.43□□□□□ -0.1
Vps54-202ENSMUST00000109578 U2surpQ6NV83 1029 aaKnown RBP14.43□□□□□ -0.1
Vps54-202ENSMUST00000109578 PaskQ8CEE6 1383 aa14.43□□□□□ -0.1
Vps54-202ENSMUST00000109578 Trim28Q62318 834 aa14.43□□□□□ -0.1
Vps54-202ENSMUST00000109578 Ssh1Q76I79 1042 aa14.43□□□□□ -0.1
Vps54-202ENSMUST00000109578 Aldh1l1Q8R0Y6 902 aa14.43□□□□□ -0.1
Vps54-202ENSMUST00000109578 Uhrf1bp1B2KF50 1429 aa14.42□□□□□ -0.1
Vps54-202ENSMUST00000109578 Pabpn1Q8CCS6 302 aaKnown RBP14.42□□□□□ -0.1
Vps54-202ENSMUST00000109578 Ipo4Q8VI75 1082 aa14.42□□□□□ -0.1
Vps54-202ENSMUST00000109578 Klhdc4Q921I2 584 aa14.42□□□□□ -0.1
Vps54-202ENSMUST00000109578 Tfip11Q9ERA6 838 aaKnown RBP14.42□□□□□ -0.1
Vps54-202ENSMUST00000109578 Cabp2Q9JLK4 216 aa14.42□□□□□ -0.1
Vps54-202ENSMUST00000109578 Map3k19E9Q3S4 1311 aa14.42□□□□□ -0.1
Vps54-202ENSMUST00000109578 Qser1A2BIE1 1698 aa14.42□□□□□ -0.1
Vps54-202ENSMUST00000109578 Fchsd2Q3USJ8 740 aa14.41□□□□□ -0.1
Vps54-202ENSMUST00000109578 Ahdc1Q6PAL7 1594 aaKnown RBP14.41□□□□□ -0.1
Vps54-202ENSMUST00000109578 KnstrnQ9D9Z1 312 aaKnown RBP14.41□□□□□ -0.1
Vps54-202ENSMUST00000109578 Plcb2A3KGF7 1181 aa14.41□□□□□ -0.1
Vps54-202ENSMUST00000109578 MvpQ9EQK5 861 aa14.41□□□□□ -0.1
Vps54-202ENSMUST00000109578 Usp16Q99LG0 825 aa14.4□□□□□ -0.1
Vps54-202ENSMUST00000109578 Mcm4P49717 862 aa14.39□□□□□ -0.11
Vps54-202ENSMUST00000109578 Dmrtc1Q9D9R7 182 aa14.39□□□□□ -0.11
Vps54-202ENSMUST00000109578 Nek4Q9Z1J2 792 aa14.38□□□□□ -0.11
Vps54-202ENSMUST00000109578 Ankrd44B2RXR6 993 aa14.38□□□□□ -0.11
Vps54-202ENSMUST00000109578 Wdr63B2RY71 923 aa14.38□□□□□ -0.11
Vps54-202ENSMUST00000109578 Uhrf1bp1lA2RSJ4 1457 aa14.38□□□□□ -0.11
Vps54-202ENSMUST00000109578 Naip7Q9JIB3 1402 aa14.38□□□□□ -0.11
Retrieved 100 of 22,080 RNA–protein pairs in 62 ms