RNA–Protein interactions for RNA: ENSMUST00000108809.7

Trim11-202, Transcript of E3 ubiquitin-protein ligase TRIM11, mousemouse

TSL 1 (best) BASIC

Gene Trim11, Length 3,522 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11-202ENSMUST00000108809 4930567H17RikQ3V0K5 233 aa14.87□□□□□ -0.03
Trim11-202ENSMUST00000108809 Ccar1Q8CH18 1146 aaKnown RBP14.87□□□□□ -0.03
Trim11-202ENSMUST00000108809 Itsn1Q9Z0R4 1714 aa14.86□□□□□ -0.03
Trim11-202ENSMUST00000108809 Ppp2r3aB2RXC8 1150 aa14.86□□□□□ -0.03
Trim11-202ENSMUST00000108809 Zranb1Q7M760 708 aa14.86□□□□□ -0.03
Trim11-202ENSMUST00000108809 Dusp27Q148W8 1138 aa14.85□□□□□ -0.03
Trim11-202ENSMUST00000108809 Hsp90ab1P11499 724 aaKnown RBP14.84□□□□□ -0.03
Trim11-202ENSMUST00000108809 Exosc9Q9JHI7 438 aaKnown RBP14.84□□□□□ -0.03
Trim11-202ENSMUST00000108809 Fgd1P52734 960 aa14.84□□□□□ -0.03
Trim11-202ENSMUST00000108809 Ppp1r3fQ9JIG4 799 aa14.83□□□□□ -0.03
Trim11-202ENSMUST00000108809 Ttc21aQ8C0S4 1314 aa14.83□□□□□ -0.04
Trim11-202ENSMUST00000108809 DaxxO35613 739 aa14.83□□□□□ -0.04
Trim11-202ENSMUST00000108809 Stk26Q99JT2 416 aa14.83□□□□□ -0.04
Trim11-202ENSMUST00000108809 CastP51125 788 aa14.81□□□□□ -0.04
Trim11-202ENSMUST00000108809 Polr3glQ8R0C0 218 aa14.81□□□□□ -0.04
Trim11-202ENSMUST00000108809 Ciz1Q8VEH2 845 aa14.81□□□□□ -0.04
Trim11-202ENSMUST00000108809 Atl3Q91YH5 541 aa14.81□□□□□ -0.04
Trim11-202ENSMUST00000108809 Ankrd50F7BE84 1390 aa14.81□□□□□ -0.04
Trim11-202ENSMUST00000108809 NinlQ6ZQ12 1394 aa14.81□□□□□ -0.04
Trim11-202ENSMUST00000108809 Nwd1A6H603 1563 aa14.81□□□□□ -0.04
Trim11-202ENSMUST00000108809 PaskQ8CEE6 1383 aa14.81□□□□□ -0.04
Trim11-202ENSMUST00000108809 Plekhg1F6S200 1446 aa14.81□□□□□ -0.04
Trim11-202ENSMUST00000108809 Shq1Q7TMX5 569 aa14.8□□□□□ -0.04
Trim11-202ENSMUST00000108809 KarsQ99MN1 595 aaKnown RBP14.8□□□□□ -0.04
Trim11-202ENSMUST00000108809 Atp7bQ64446 1462 aa14.8□□□□□ -0.04
Trim11-202ENSMUST00000108809 4933416C03RikQ3V063 378 aa14.8□□□□□ -0.04
Trim11-202ENSMUST00000108809 Tbc1d32Q3URV1 1296 aa14.79□□□□□ -0.04
Trim11-202ENSMUST00000108809 Gm156Q58A37 223 aa14.79□□□□□ -0.04
Trim11-202ENSMUST00000108809 Armcx1Q9CX83 456 aa14.79□□□□□ -0.04
Trim11-202ENSMUST00000108809 Cavin4A2AMM0 362 aa14.79□□□□□ -0.04
Trim11-202ENSMUST00000108809 Pnmal2G3X9N3 661 aa14.79□□□□□ -0.04
Trim11-202ENSMUST00000108809 Gsto1O09131 240 aa14.79□□□□□ -0.04
Trim11-202ENSMUST00000108809 Trim26Q99PN3 545 aa14.79□□□□□ -0.04
Trim11-202ENSMUST00000108809 Hs1bp3Q3TC93 395 aa14.78□□□□□ -0.04
Trim11-202ENSMUST00000108809 Phlpp2Q8BXA7 1320 aa14.78□□□□□ -0.04
Trim11-202ENSMUST00000108809 Pik3r4Q8VD65 1358 aa14.78□□□□□ -0.04
Trim11-202ENSMUST00000108809 Naip7Q9JIB3 1402 aa14.78□□□□□ -0.04
Trim11-202ENSMUST00000108809 Sptbn5F6UCX4 1208 aa14.77□□□□□ -0.04
Trim11-202ENSMUST00000108809 Q4VA45 678 aa14.76□□□□□ -0.05
Trim11-202ENSMUST00000108809 Synj2Q9D2G5 1434 aa14.76□□□□□ -0.05
Trim11-202ENSMUST00000108809 Zc3h13E9Q784 1729 aaKnown RBP14.76□□□□□ -0.05
Trim11-202ENSMUST00000108809 Trim28Q62318 834 aa14.76□□□□□ -0.05
Trim11-202ENSMUST00000108809 Cdk19Q8BWD8 501 aa14.76□□□□□ -0.05
Trim11-202ENSMUST00000108809 AU019823E9PUQ3 292 aa14.75□□□□□ -0.05
Trim11-202ENSMUST00000108809 Ccdc171E9Q1U1 1324 aa14.74□□□□□ -0.05
Trim11-202ENSMUST00000108809 Atp2b2Q9R0K7 1198 aa14.74□□□□□ -0.05
Trim11-202ENSMUST00000108809 Kif1aP33173 1695 aa14.74□□□□□ -0.05
Trim11-202ENSMUST00000108809 Rabep1O35551 862 aa14.73□□□□□ -0.05
Trim11-202ENSMUST00000108809 Fchsd2Q3USJ8 740 aa14.73□□□□□ -0.05
Trim11-202ENSMUST00000108809 Slc12a5Q91V14 1138 aa14.73□□□□□ -0.05
Trim11-202ENSMUST00000108809 Rbm25B2RY56 838 aaKnown RBP14.73□□□□□ -0.05
Trim11-202ENSMUST00000108809 Maco1Q7TQE6 664 aaKnown RBP14.73□□□□□ -0.05
Trim11-202ENSMUST00000108809 Spef2Q8C9J3 1734 aa14.73□□□□□ -0.05
Trim11-202ENSMUST00000108809 Q9D9H8 365 aa14.72□□□□□ -0.05
Trim11-202ENSMUST00000108809 FanciQ8K368 1330 aa14.72□□□□□ -0.05
Trim11-202ENSMUST00000108809 Atp1b4Q99ME6 356 aa14.72□□□□□ -0.05
Trim11-202ENSMUST00000108809 RictorQ6QI06 1708 aa14.71□□□□□ -0.05
Trim11-202ENSMUST00000108809 Gm6268A2A3U9 297 aa14.71□□□□□ -0.05
Trim11-202ENSMUST00000108809 Utp14aQ640M1 767 aaKnown RBP14.71□□□□□ -0.05
Trim11-202ENSMUST00000108809 Tnpo1Q8BFY9 898 aaKnown RBP14.71□□□□□ -0.06
Trim11-202ENSMUST00000108809 Ccdc60Q8C4J0 545 aa14.71□□□□□ -0.06
Trim11-202ENSMUST00000108809 Cluap1Q8R3P7 413 aa14.71□□□□□ -0.06
Trim11-202ENSMUST00000108809 Kif2cQ922S8 721 aa14.71□□□□□ -0.06
Trim11-202ENSMUST00000108809 PalmQ9Z0P4 383 aa14.71□□□□□ -0.06
Trim11-202ENSMUST00000108809 Map3k19E9Q3S4 1311 aa14.71□□□□□ -0.06
Trim11-202ENSMUST00000108809 Dip2aQ8BWT5 1523 aa14.7□□□□□ -0.06
Trim11-202ENSMUST00000108809 Swt1Q9DBQ9 907 aa14.7□□□□□ -0.06
Trim11-202ENSMUST00000108809 Nsd3Q6P2L6 1439 aa14.68□□□□□ -0.06
Trim11-202ENSMUST00000108809 Htatsf1Q8BGC0 757 aa14.68□□□□□ -0.06
Trim11-202ENSMUST00000108809 Antxr1Q9CZ52 562 aa14.68□□□□□ -0.06
Trim11-202ENSMUST00000108809 G3bp1P97855 465 aaKnown RBP14.67□□□□□ -0.06
Trim11-202ENSMUST00000108809 Ercc6l2Q9JIM3 1537 aa14.67□□□□□ -0.06
Trim11-202ENSMUST00000108809 Uhrf1bp1lA2RSJ4 1457 aa14.66□□□□□ -0.06
Trim11-202ENSMUST00000108809 Ipo4Q8VI75 1082 aa14.66□□□□□ -0.06
Trim11-202ENSMUST00000108809 Ppp1r15aP17564 657 aa14.66□□□□□ -0.06
Trim11-202ENSMUST00000108809 Ppp1r18Q8BQ30 594 aa14.66□□□□□ -0.06
Trim11-202ENSMUST00000108809 Kif18aQ91WD7 886 aa14.66□□□□□ -0.06
Trim11-202ENSMUST00000108809 Brd1E9PZ26 1189 aaKnown RBP14.65□□□□□ -0.06
Trim11-202ENSMUST00000108809 SkilQ60665 675 aa14.65□□□□□ -0.06
Trim11-202ENSMUST00000108809 Map7O88735 730 aa14.65□□□□□ -0.06
Trim11-202ENSMUST00000108809 Q3UPC7 1272 aa14.65□□□□□ -0.06
Trim11-202ENSMUST00000108809 Znf330Q922H9 316 aa14.65□□□□□ -0.06
Trim11-202ENSMUST00000108809 Cdc37l1Q9CZP7 335 aa14.65□□□□□ -0.06
Trim11-202ENSMUST00000108809 Plekhm2Q80TQ5 1018 aa14.65□□□□□ -0.06
Trim11-202ENSMUST00000108809 Vamp4O70480 141 aa14.64□□□□□ -0.07
Trim11-202ENSMUST00000108809 Afap1Q80YS6 731 aa14.64□□□□□ -0.07
Trim11-202ENSMUST00000108809 Rsph4aQ8BYM7 716 aa14.64□□□□□ -0.07
Trim11-202ENSMUST00000108809 Aldh1l1Q8R0Y6 902 aa14.64□□□□□ -0.07
Trim11-202ENSMUST00000108809 PtpruB1AUH1 1446 aa14.63□□□□□ -0.07
Trim11-202ENSMUST00000108809 Mfap1aC0HKD8 439 aaKnown RBP14.63□□□□□ -0.07
Trim11-202ENSMUST00000108809 Mfap1bC0HKD9 439 aaKnown RBP14.63□□□□□ -0.07
Trim11-202ENSMUST00000108809 Cps1Q8C196 1500 aa14.63□□□□□ -0.07
Trim11-202ENSMUST00000108809 Kif20bQ80WE4 1774 aaKnown RBP14.63□□□□□ -0.07
Trim11-202ENSMUST00000108809 ArxO35085 564 aa14.63□□□□□ -0.07
Trim11-202ENSMUST00000108809 Pknox2Q8BG99 474 aa14.62□□□□□ -0.07
Trim11-202ENSMUST00000108809 Mdc1Q5PSV9 1707 aa14.62□□□□□ -0.07
Trim11-202ENSMUST00000108809 Nutm1Q8BHP2 1126 aa14.62□□□□□ -0.07
Trim11-202ENSMUST00000108809 MvpQ9EQK5 861 aa14.62□□□□□ -0.07
Trim11-202ENSMUST00000108809 Gemin5Q8BX17 1502 aaKnown RBP14.61□□□□□ -0.07
Trim11-202ENSMUST00000108809 Wwc1Q5SXA9 1104 aa14.61□□□□□ -0.07
Retrieved 100 of 22,080 RNA–protein pairs in 68.4 ms