RNA–Protein interactions for RNA: ENSMUST00000108809.7

Trim11-202, Transcript of E3 ubiquitin-protein ligase TRIM11, mousemouse

TSL 1 (best) BASIC

Gene Trim11, Length 3,522 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11-202ENSMUST00000108809 NischQ80TM9 1593 aa22.45■■□□□ 1.18
Trim11-202ENSMUST00000108809 Gm35339A0A140LHH9 1649 aa22.19■■□□□ 1.14
Trim11-202ENSMUST00000108809 Abcc9P70170 1546 aa21.88■■□□□ 1.09
Trim11-202ENSMUST00000108809 Abcc8B2RUS7 1588 aa21.33■■□□□ 1.01
Trim11-202ENSMUST00000108809 Rtl1Q7M732 1744 aa20.84■□□□□ 0.93
Trim11-202ENSMUST00000108809 Rhox8Q6VSS7 320 aa20.62■□□□□ 0.89
Trim11-202ENSMUST00000108809 Ccdc180J3QNE4 1664 aa20.42■□□□□ 0.86
Trim11-202ENSMUST00000108809 Zcchc6Q5BLK4 1491 aaKnown RBP20.07■□□□□ 0.8
Trim11-202ENSMUST00000108809 Dcaf1Q80TR8 1506 aa19.97■□□□□ 0.79
Trim11-202ENSMUST00000108809 ScribQ80U72 1612 aa19.86■□□□□ 0.77
Trim11-202ENSMUST00000108809 Rb1cc1Q9ESK9 1588 aa19.69■□□□□ 0.74
Trim11-202ENSMUST00000108809 Baz1aO88379 1555 aa19.48■□□□□ 0.71
Trim11-202ENSMUST00000108809 Kdm5dQ62240 1548 aa19.46■□□□□ 0.71
Trim11-202ENSMUST00000108809 Rpgrip1Q9EPQ2 1331 aa19.36■□□□□ 0.69
Trim11-202ENSMUST00000108809 HrcG5E8J6 738 aa19.33■□□□□ 0.68
Trim11-202ENSMUST00000108809 NacadQ5SWP3 1504 aa19.26■□□□□ 0.67
Trim11-202ENSMUST00000108809 Ccdc136Q3TVA9 1136 aa19.14■□□□□ 0.66
Trim11-202ENSMUST00000108809 Crybg2B7ZCC2 1516 aa19.13■□□□□ 0.65
Trim11-202ENSMUST00000108809 Smarca2Q6DIC0 1577 aa19.09■□□□□ 0.65
Trim11-202ENSMUST00000108809 Acin1Q9JIX8 1338 aaKnown RBP19.07■□□□□ 0.64
Trim11-202ENSMUST00000108809 Sycp2Q9CUU3 1500 aa18.86■□□□□ 0.61
Trim11-202ENSMUST00000108809 Trim41Q5NCC3 630 aa18.82■□□□□ 0.6
Trim11-202ENSMUST00000108809 Cep164Q5DU05 1446 aa18.78■□□□□ 0.6
Trim11-202ENSMUST00000108809 Ehmt2Q9Z148 1263 aaKnown RBP18.76■□□□□ 0.59
Trim11-202ENSMUST00000108809 Brd4Q9ESU6 1400 aaKnown RBP18.52■□□□□ 0.55
Trim11-202ENSMUST00000108809 Cecr2E9Q2Z1 1453 aa18.51■□□□□ 0.55
Trim11-202ENSMUST00000108809 Rsf1E9PWW9 1441 aaKnown RBP18.49■□□□□ 0.55
Trim11-202ENSMUST00000108809 BicraF8VPZ9 1578 aa18.46■□□□□ 0.55
Trim11-202ENSMUST00000108809 Synj1Q8CHC4 1574 aa18.43■□□□□ 0.54
Trim11-202ENSMUST00000108809 Golga3P55937 1487 aa18.4■□□□□ 0.54
Trim11-202ENSMUST00000108809 Chic1Q8CBW7 227 aa18.37■□□□□ 0.53
Trim11-202ENSMUST00000108809 Ccdc88bQ4QRL3 1481 aa18.35■□□□□ 0.53
Trim11-202ENSMUST00000108809 Top2bQ64511 1612 aa18.29■□□□□ 0.52
Trim11-202ENSMUST00000108809 Cngb1E1AZ71 1325 aa18.29■□□□□ 0.52
Trim11-202ENSMUST00000108809 Pcgf6Q99NA9 353 aa18.28■□□□□ 0.52
Trim11-202ENSMUST00000108809 CftrP26361 1476 aa18.27■□□□□ 0.52
Trim11-202ENSMUST00000108809 Cttnbp2B9EJA2 1648 aa18.22■□□□□ 0.51
Trim11-202ENSMUST00000108809 Gab3Q8BSM5 595 aa18.11■□□□□ 0.49
Trim11-202ENSMUST00000108809 Smarca4Q3TKT4 1613 aaKnown RBP18.07■□□□□ 0.48
Trim11-202ENSMUST00000108809 Cc2d2aQ8CFW7 1633 aa18.07■□□□□ 0.48
Trim11-202ENSMUST00000108809 Supt5hO55201 1082 aaKnown RBP17.97■□□□□ 0.47
Trim11-202ENSMUST00000108809 Esf1Q3V1V3 845 aaKnown RBP17.93■□□□□ 0.46
Trim11-202ENSMUST00000108809 Rapgef2Q8CHG7 1496 aa17.93■□□□□ 0.46
Trim11-202ENSMUST00000108809 Top2aQ01320 1528 aaKnown RBP17.91■□□□□ 0.46
Trim11-202ENSMUST00000108809 Fmn1Q05860 1466 aa17.9■□□□□ 0.46
Trim11-202ENSMUST00000108809 Mier1Q5UAK0 511 aa17.87■□□□□ 0.45
Trim11-202ENSMUST00000108809 NefmP08553 848 aa17.86■□□□□ 0.45
Trim11-202ENSMUST00000108809 Iqgap2Q3UQ44 1575 aa17.81■□□□□ 0.44
Trim11-202ENSMUST00000108809 Eif4g1Q6NZJ6 1600 aaKnown RBP17.72■□□□□ 0.43
Trim11-202ENSMUST00000108809 Cep162Q6ZQ06 1403 aa17.72■□□□□ 0.43
Trim11-202ENSMUST00000108809 TnnQ80Z71 1560 aa17.67■□□□□ 0.42
Trim11-202ENSMUST00000108809 Zeb1Q64318 1117 aa17.65■□□□□ 0.42
Trim11-202ENSMUST00000108809 Atad2bE9Q166 1460 aaKnown RBP17.64■□□□□ 0.41
Trim11-202ENSMUST00000108809 Sall2Q9QX96 1004 aa17.53■□□□□ 0.4
Trim11-202ENSMUST00000108809 Neurod1Q60867 357 aa17.53■□□□□ 0.4
Trim11-202ENSMUST00000108809 UbtfP25976 765 aaKnown RBP17.51■□□□□ 0.39
Trim11-202ENSMUST00000108809 Pds5bQ4VA53 1446 aaKnown RBP17.49■□□□□ 0.39
Trim11-202ENSMUST00000108809 Wdr62Q3U3T8 1523 aa17.44■□□□□ 0.38
Trim11-202ENSMUST00000108809 Lamc3Q9R0B6 1581 aa17.43■□□□□ 0.38
Trim11-202ENSMUST00000108809 Arhgap35Q91YM2 1499 aa17.42■□□□□ 0.38
Trim11-202ENSMUST00000108809 Frmpd1A2AKB4 1549 aa17.42■□□□□ 0.38
Trim11-202ENSMUST00000108809 NrkQ9R0G8 1455 aa17.42■□□□□ 0.38
Trim11-202ENSMUST00000108809 Myt1lP97500 1187 aa17.41■□□□□ 0.38
Trim11-202ENSMUST00000108809 Ncapd3Q6ZQK0 1506 aa17.39■□□□□ 0.38
Trim11-202ENSMUST00000108809 Clip1Q922J3 1391 aa17.39■□□□□ 0.38
Trim11-202ENSMUST00000108809 PtprkP35822 1457 aa17.37■□□□□ 0.37
Trim11-202ENSMUST00000108809 Unc13aQ4KUS2 1712 aa17.36■□□□□ 0.37
Trim11-202ENSMUST00000108809 Npm2Q80W85 207 aa17.36■□□□□ 0.37
Trim11-202ENSMUST00000108809 Aebp2Q9Z248 504 aaKnown RBP17.32■□□□□ 0.36
Trim11-202ENSMUST00000108809 Arap1Q4LDD4 1452 aa17.3■□□□□ 0.36
Trim11-202ENSMUST00000108809 Camsap1A2AHC3 1581 aa17.3■□□□□ 0.36
Trim11-202ENSMUST00000108809 Las1lA2BE28 776 aaKnown RBP17.3■□□□□ 0.36
Trim11-202ENSMUST00000108809 Shroom4Q1W617 1475 aa17.28■□□□□ 0.36
Trim11-202ENSMUST00000108809 Map3k1P53349 1493 aa17.28■□□□□ 0.36
Trim11-202ENSMUST00000108809 Arhgef5E9Q7D5 1581 aa17.26■□□□□ 0.35
Trim11-202ENSMUST00000108809 Plekhg3Q4VAC9 1341 aa17.25■□□□□ 0.35
Trim11-202ENSMUST00000108809 Kdm5bQ80Y84 1544 aa17.24■□□□□ 0.35
Trim11-202ENSMUST00000108809 Eea1Q8BL66 1411 aa17.23■□□□□ 0.35
Trim11-202ENSMUST00000108809 ClspnQ80YR7 1315 aa17.23■□□□□ 0.35
Trim11-202ENSMUST00000108809 Ccdc18Q640L5 1455 aa17.23■□□□□ 0.35
Trim11-202ENSMUST00000108809 Erich3F6QRE9 1637 aa17.19■□□□□ 0.34
Trim11-202ENSMUST00000108809 TonslQ6NZL6 1363 aa17.19■□□□□ 0.34
Trim11-202ENSMUST00000108809 Kif15Q6P9L6 1387 aa17.18■□□□□ 0.34
Trim11-202ENSMUST00000108809 Anks4bQ8K3X6 423 aa17.18■□□□□ 0.34
Trim11-202ENSMUST00000108809 Wdr66E9Q743 1299 aa17.17■□□□□ 0.34
Trim11-202ENSMUST00000108809 Ercc6F8VPZ5 1481 aa17.16■□□□□ 0.34
Trim11-202ENSMUST00000108809 Grin2bQ01097 1482 aa17.16■□□□□ 0.34
Trim11-202ENSMUST00000108809 Tiam1Q60610 1591 aa17.15■□□□□ 0.34
Trim11-202ENSMUST00000108809 TchhA0A0B4J1F9 1599 aa17.15■□□□□ 0.34
Trim11-202ENSMUST00000108809 Mroh2bQ7M6Y6 1581 aa17.12■□□□□ 0.33
Trim11-202ENSMUST00000108809 Ankrd26Q811D2 1581 aa17.11■□□□□ 0.33
Trim11-202ENSMUST00000108809 Setd5Q5XJV7 1441 aa17.11■□□□□ 0.33
Trim11-202ENSMUST00000108809 AqrQ8CFQ3 1481 aaKnown RBP17.09■□□□□ 0.33
Trim11-202ENSMUST00000108809 Naip1Q9QWK5 1403 aa17.04■□□□□ 0.32
Trim11-202ENSMUST00000108809 Pcf11G3X9Z4 1553 aa17.04■□□□□ 0.32
Trim11-202ENSMUST00000108809 Lmo7E9PYF4 1699 aaKnown RBP17.03■□□□□ 0.32
Trim11-202ENSMUST00000108809 Il27Q8K3I6 234 aa17.02■□□□□ 0.32
Trim11-202ENSMUST00000108809 Slx4Q6P1D7 1565 aa17.02■□□□□ 0.31
Trim11-202ENSMUST00000108809 Baz1bQ9Z277 1479 aa17.01■□□□□ 0.31
Trim11-202ENSMUST00000108809 Nop58Q6DFW4 536 aaKnown RBP17■□□□□ 0.31
Retrieved 100 of 22,080 RNA–protein pairs in 96.5 ms