RNA–Protein interactions for RNA: ENSMUST00000103220.3

Snrnp200-201, Transcript of U5 small nuclear ribonucleoprotein 200 kDa helicase, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Snrnp200, Length 6,745 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp200-201ENSMUST00000103220 Eif4g3Q80XI3 1579 aaKnown RBP10.8□□□□□ -0.68
Snrnp200-201ENSMUST00000103220 EzrP26040 586 aaKnown RBP10.8□□□□□ -0.68
Snrnp200-201ENSMUST00000103220 Dnajc5P60904 198 aa10.8□□□□□ -0.68
Snrnp200-201ENSMUST00000103220 Map3k5O35099 1380 aa10.79□□□□□ -0.68
Snrnp200-201ENSMUST00000103220 Cfap99A0A140LIX9 648 aa10.79□□□□□ -0.68
Snrnp200-201ENSMUST00000103220 Kcnh8P59111 1102 aa10.79□□□□□ -0.68
Snrnp200-201ENSMUST00000103220 Grin2aP35436 1464 aa10.79□□□□□ -0.68
Snrnp200-201ENSMUST00000103220 Gm21680A0A0G2JGR8 267 aa10.79□□□□□ -0.68
Snrnp200-201ENSMUST00000103220 Gm21663A0A0G2JE01 267 aa10.79□□□□□ -0.68
Snrnp200-201ENSMUST00000103220 Gm7361D3Z6R1 267 aa10.79□□□□□ -0.68
Snrnp200-201ENSMUST00000103220 5031410I06RikE9Q4E0 267 aa10.79□□□□□ -0.68
Snrnp200-201ENSMUST00000103220 Gm1979E9QAN3 267 aa10.79□□□□□ -0.68
Snrnp200-201ENSMUST00000103220 Gm5862K7N5V5 267 aa10.79□□□□□ -0.68
Snrnp200-201ENSMUST00000103220 Gm10220K7N660 267 aa10.79□□□□□ -0.68
Snrnp200-201ENSMUST00000103220 Cchcr1Q8K2I2 770 aa10.79□□□□□ -0.68
Snrnp200-201ENSMUST00000103220 Ubxn4Q8VCH8 506 aa10.79□□□□□ -0.68
Snrnp200-201ENSMUST00000103220 Ncapd3Q6ZQK0 1506 aa10.79□□□□□ -0.68
Snrnp200-201ENSMUST00000103220 TnnQ80Z71 1560 aa10.79□□□□□ -0.68
Snrnp200-201ENSMUST00000103220 Ell2Q3UKU1 639 aa10.79□□□□□ -0.68
Snrnp200-201ENSMUST00000103220 Washc4Q3UMB9 1173 aa10.79□□□□□ -0.68
Snrnp200-201ENSMUST00000103220 PsapQ61207 557 aaKnown RBP10.79□□□□□ -0.68
Snrnp200-201ENSMUST00000103220 Dixdc1Q80Y83 711 aa10.79□□□□□ -0.68
Snrnp200-201ENSMUST00000103220 Odf2lQ9D478 642 aa10.79□□□□□ -0.68
Snrnp200-201ENSMUST00000103220 Psma5Q9Z2U1 241 aaKnown RBP10.79□□□□□ -0.68
Snrnp200-201ENSMUST00000103220 Anp32eP97822 260 aaKnown RBP10.78□□□□□ -0.68
Snrnp200-201ENSMUST00000103220 Chmp4cQ9D7F7 232 aa10.78□□□□□ -0.68
Snrnp200-201ENSMUST00000103220 Hmgb2P30681 210 aaKnown RBP10.78□□□□□ -0.68
Snrnp200-201ENSMUST00000103220 MpripP97434 1024 aa10.78□□□□□ -0.68
Snrnp200-201ENSMUST00000103220 Trim34aQ99PP6 485 aa10.78□□□□□ -0.68
Snrnp200-201ENSMUST00000103220 Dctn1O08788 1281 aa10.78□□□□□ -0.68
Snrnp200-201ENSMUST00000103220 Fkbp4P30416 458 aa10.78□□□□□ -0.68
Snrnp200-201ENSMUST00000103220 Wdhd1P59328 1117 aa10.78□□□□□ -0.68
Snrnp200-201ENSMUST00000103220 Ak7Q9D2H2 614 aa10.78□□□□□ -0.68
Snrnp200-201ENSMUST00000103220 Mroh2bQ7M6Y6 1581 aa10.77□□□□□ -0.68
Snrnp200-201ENSMUST00000103220 Cyp46a1Q9WVK8 500 aa10.77□□□□□ -0.68
Snrnp200-201ENSMUST00000103220 Trim34bJ3QNR8 485 aa10.77□□□□□ -0.69
Snrnp200-201ENSMUST00000103220 Hnrnpul1Q8VDM6 859 aaKnown RBP10.77□□□□□ -0.69
Snrnp200-201ENSMUST00000103220 Ncbp1Q3UYV9 790 aaKnown RBP10.77□□□□□ -0.69
Snrnp200-201ENSMUST00000103220 Ccdc30Q8BVF4 654 aa10.77□□□□□ -0.69
Snrnp200-201ENSMUST00000103220 Atl3Q91YH5 541 aa10.77□□□□□ -0.69
Snrnp200-201ENSMUST00000103220 Sycp1Q62209 993 aa10.77□□□□□ -0.69
Snrnp200-201ENSMUST00000103220 4930572O03RikQ8C5Y0 211 aa10.77□□□□□ -0.69
Snrnp200-201ENSMUST00000103220 Smc2Q8CG48 1191 aaKnown RBP10.77□□□□□ -0.69
Snrnp200-201ENSMUST00000103220 Rapgef4Q9EQZ6 1011 aa10.77□□□□□ -0.69
Snrnp200-201ENSMUST00000103220 Hdgfl1Q2VPR5 283 aa10.76□□□□□ -0.69
Snrnp200-201ENSMUST00000103220 Commd10Q8JZY2 202 aa10.76□□□□□ -0.69
Snrnp200-201ENSMUST00000103220 Stk3Q9JI10 497 aa10.76□□□□□ -0.69
Snrnp200-201ENSMUST00000103220 Wdr7Q920I9 1489 aa10.76□□□□□ -0.69
Snrnp200-201ENSMUST00000103220 Rad54l2Q99NG0 1466 aa10.76□□□□□ -0.69
Snrnp200-201ENSMUST00000103220 Sel1lQ9Z2G6 790 aa10.76□□□□□ -0.69
Snrnp200-201ENSMUST00000103220 Cd109Q8R422 1442 aa10.75□□□□□ -0.69
Snrnp200-201ENSMUST00000103220 Cwc15Q9JHS9 229 aaKnown RBP10.75□□□□□ -0.69
Snrnp200-201ENSMUST00000103220 Gm7298A0A0N4SVU1 1476 aa10.75□□□□□ -0.69
Snrnp200-201ENSMUST00000103220 Pnmal2G3X9N3 661 aa10.75□□□□□ -0.69
Snrnp200-201ENSMUST00000103220 Nutm1Q8BHP2 1126 aa10.75□□□□□ -0.69
Snrnp200-201ENSMUST00000103220 Mad1l1Q9WTX8 717 aaKnown RBP10.75□□□□□ -0.69
Snrnp200-201ENSMUST00000103220 Pde4bB1AWC9 736 aa10.75□□□□□ -0.69
Snrnp200-201ENSMUST00000103220 Ccdc141E9Q8Q6 1531 aa10.75□□□□□ -0.69
Snrnp200-201ENSMUST00000103220 Zcchc11B2RX14 1644 aaKnown RBP10.75□□□□□ -0.69
Snrnp200-201ENSMUST00000103220 Ccdc171E9Q1U1 1324 aa10.75□□□□□ -0.69
Snrnp200-201ENSMUST00000103220 Ipo4Q8VI75 1082 aa10.74□□□□□ -0.69
Snrnp200-201ENSMUST00000103220 Flad1Q8R123 492 aa10.74□□□□□ -0.69
Snrnp200-201ENSMUST00000103220 Ccdc96Q9CR92 584 aa10.74□□□□□ -0.69
Snrnp200-201ENSMUST00000103220 Cdk19Q8BWD8 501 aa10.74□□□□□ -0.69
Snrnp200-201ENSMUST00000103220 TbcaP48428 108 aaKnown RBP10.73□□□□□ -0.69
Snrnp200-201ENSMUST00000103220 Cep89Q9CZX2 791 aa10.73□□□□□ -0.69
Snrnp200-201ENSMUST00000103220 Nap1l1P28656 391 aaKnown RBP10.73□□□□□ -0.69
Snrnp200-201ENSMUST00000103220 Gapvd1Q6PAR5 1458 aa10.73□□□□□ -0.69
Snrnp200-201ENSMUST00000103220 Fnbp4Q6ZQ03 1031 aa10.73□□□□□ -0.69
Snrnp200-201ENSMUST00000103220 A0A0U1RNP2 1173 aa10.73□□□□□ -0.69
Snrnp200-201ENSMUST00000103220 Cavin4A2AMM0 362 aa10.73□□□□□ -0.69
Snrnp200-201ENSMUST00000103220 Ints3Q7TPD0 1041 aaKnown RBP10.73□□□□□ -0.69
Snrnp200-201ENSMUST00000103220 ApobrQ8VBT6 942 aa10.73□□□□□ -0.69
Snrnp200-201ENSMUST00000103220 Ttc5Q99LG4 440 aa10.73□□□□□ -0.69
Snrnp200-201ENSMUST00000103220 Eif3aP23116 1344 aaKnown RBP10.73□□□□□ -0.69
Snrnp200-201ENSMUST00000103220 Mns1Q61884 491 aa10.72□□□□□ -0.69
Snrnp200-201ENSMUST00000103220 Ttc19Q8CC21 365 aa10.72□□□□□ -0.69
Snrnp200-201ENSMUST00000103220 Znf704Q9ERQ3 566 aa10.72□□□□□ -0.69
Snrnp200-201ENSMUST00000103220 Mcm2P97310 904 aa10.72□□□□□ -0.69
Snrnp200-201ENSMUST00000103220 Usp48Q3V0C5 1052 aa10.72□□□□□ -0.69
Snrnp200-201ENSMUST00000103220 Zkscan2G3X952 960 aa10.72□□□□□ -0.69
Snrnp200-201ENSMUST00000103220 Gm156Q58A37 223 aa10.72□□□□□ -0.69
Snrnp200-201ENSMUST00000103220 NgdnQ9DB96 315 aaKnown RBP10.72□□□□□ -0.69
Snrnp200-201ENSMUST00000103220 AcrbpQ3V140 540 aa10.71□□□□□ -0.69
Snrnp200-201ENSMUST00000103220 Slc5a4bQ91ZP4 660 aa10.71□□□□□ -0.69
Snrnp200-201ENSMUST00000103220 Disp1Q3TDN0 1521 aa10.71□□□□□ -0.69
Snrnp200-201ENSMUST00000103220 Gnai2P08752 355 aaKnown RBP10.71□□□□□ -0.69
Snrnp200-201ENSMUST00000103220 PogkQ80TC5 607 aa10.71□□□□□ -0.69
Snrnp200-201ENSMUST00000103220 Rpgrip1lQ8CG73 1264 aa10.71□□□□□ -0.69
Snrnp200-201ENSMUST00000103220 HnrnpmQ9D0E1 729 aaKnown RBP10.71□□□□□ -0.7
Snrnp200-201ENSMUST00000103220 Nol8Q3UHX0 1147 aaKnown RBP10.7□□□□□ -0.7
Snrnp200-201ENSMUST00000103220 Cabp2Q9JLK4 216 aa10.7□□□□□ -0.7
Snrnp200-201ENSMUST00000103220 Hs1bp3Q3TC93 395 aa10.7□□□□□ -0.7
Snrnp200-201ENSMUST00000103220 Pdcl3Q8BVF2 240 aa10.7□□□□□ -0.7
Snrnp200-201ENSMUST00000103220 Pank1Q8K4K6 548 aa10.7□□□□□ -0.7
Snrnp200-201ENSMUST00000103220 Rbm10Q99KG3 930 aaKnown RBP10.7□□□□□ -0.7
Snrnp200-201ENSMUST00000103220 Ripk4Q9ERK0 786 aa10.7□□□□□ -0.7
Snrnp200-201ENSMUST00000103220 PdcQ9QW08 244 aa10.7□□□□□ -0.7
Snrnp200-201ENSMUST00000103220 Dhx8A2A4P0 1244 aaKnown RBP10.7□□□□□ -0.7
Snrnp200-201ENSMUST00000103220 Adgrl3Q80TS3 1537 aa10.69□□□□□ -0.7
Retrieved 100 of 22,080 RNA–protein pairs in 187.9 ms