RNA–Protein interactions for RNA: ENSMUST00000103220.3

Snrnp200-201, Transcript of U5 small nuclear ribonucleoprotein 200 kDa helicase, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Snrnp200, Length 6,745 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp200-201ENSMUST00000103220 Rhox8Q6VSS7 320 aa16.01■□□□□ 0.15
Snrnp200-201ENSMUST00000103220 Rpgrip1Q9EPQ2 1331 aa14.49□□□□□ -0.09
Snrnp200-201ENSMUST00000103220 Ehmt2Q9Z148 1263 aaKnown RBP14.37□□□□□ -0.11
Snrnp200-201ENSMUST00000103220 Esf1Q3V1V3 845 aaKnown RBP14.29□□□□□ -0.12
Snrnp200-201ENSMUST00000103220 Cngb1E1AZ71 1325 aa14.24□□□□□ -0.13
Snrnp200-201ENSMUST00000103220 NischQ80TM9 1593 aa14.21□□□□□ -0.14
Snrnp200-201ENSMUST00000103220 Ube2uB1AUC4 352 aa14.12□□□□□ -0.15
Snrnp200-201ENSMUST00000103220 Las1lA2BE28 776 aaKnown RBP14.11□□□□□ -0.15
Snrnp200-201ENSMUST00000103220 Ccdc136Q3TVA9 1136 aa14.11□□□□□ -0.15
Snrnp200-201ENSMUST00000103220 Zeb1Q64318 1117 aa14.11□□□□□ -0.15
Snrnp200-201ENSMUST00000103220 Pelp1Q9DBD5 1123 aaKnown RBP14.02□□□□□ -0.17
Snrnp200-201ENSMUST00000103220 Npm2Q80W85 207 aa13.95□□□□□ -0.18
Snrnp200-201ENSMUST00000103220 Wdr66E9Q743 1299 aa13.9□□□□□ -0.19
Snrnp200-201ENSMUST00000103220 Trim41Q5NCC3 630 aa13.85□□□□□ -0.19
Snrnp200-201ENSMUST00000103220 Gab3Q8BSM5 595 aa13.85□□□□□ -0.19
Snrnp200-201ENSMUST00000103220 Myt1lP97500 1187 aa13.75□□□□□ -0.21
Snrnp200-201ENSMUST00000103220 Gm35339A0A140LHH9 1649 aa13.63□□□□□ -0.23
Snrnp200-201ENSMUST00000103220 Abcc9P70170 1546 aa13.56□□□□□ -0.24
Snrnp200-201ENSMUST00000103220 Amer1Q7TS75 1132 aa13.42□□□□□ -0.26
Snrnp200-201ENSMUST00000103220 Abcc8B2RUS7 1588 aa13.41□□□□□ -0.26
Snrnp200-201ENSMUST00000103220 CenpbP27790 599 aa13.38□□□□□ -0.27
Snrnp200-201ENSMUST00000103220 Il27Q8K3I6 234 aa13.37□□□□□ -0.27
Snrnp200-201ENSMUST00000103220 Stra8P70278 393 aa13.31□□□□□ -0.28
Snrnp200-201ENSMUST00000103220 UbtfP25976 765 aaKnown RBP13.3□□□□□ -0.28
Snrnp200-201ENSMUST00000103220 NefmP08553 848 aa13.22□□□□□ -0.29
Snrnp200-201ENSMUST00000103220 Slc24a1Q91WD8 1130 aa13.17□□□□□ -0.3
Snrnp200-201ENSMUST00000103220 Ttbk1Q6PCN3 1308 aa13.16□□□□□ -0.3
Snrnp200-201ENSMUST00000103220 Acin1Q9JIX8 1338 aaKnown RBP13.13□□□□□ -0.31
Snrnp200-201ENSMUST00000103220 4930567H17RikQ3V0K5 233 aa13.1□□□□□ -0.31
Snrnp200-201ENSMUST00000103220 Os9Q8K2C7 672 aa13.09□□□□□ -0.31
Snrnp200-201ENSMUST00000103220 Ap3b1Q9Z1T1 1105 aa13.03□□□□□ -0.32
Snrnp200-201ENSMUST00000103220 Anp32bQ9EST5 272 aaKnown RBP13.03□□□□□ -0.32
Snrnp200-201ENSMUST00000103220 Fam50aQ9WV03 339 aaKnown RBP13.02□□□□□ -0.33
Snrnp200-201ENSMUST00000103220 NacadQ5SWP3 1504 aa12.99□□□□□ -0.33
Snrnp200-201ENSMUST00000103220 Neurod1Q60867 357 aa12.99□□□□□ -0.33
Snrnp200-201ENSMUST00000103220 Zcchc6Q5BLK4 1491 aaKnown RBP12.95□□□□□ -0.34
Snrnp200-201ENSMUST00000103220 NrdcQ8BHG1 1161 aa12.92□□□□□ -0.34
Snrnp200-201ENSMUST00000103220 Cdk11bP24788 784 aaKnown RBP12.9□□□□□ -0.34
Snrnp200-201ENSMUST00000103220 4933416C03RikQ3V063 378 aa12.89□□□□□ -0.35
Snrnp200-201ENSMUST00000103220 Ppargc1bQ8VHJ7 1014 aa12.89□□□□□ -0.35
Snrnp200-201ENSMUST00000103220 Dcaf1Q80TR8 1506 aa12.89□□□□□ -0.35
Snrnp200-201ENSMUST00000103220 Tnnt3Q9QZ47 272 aa12.87□□□□□ -0.35
Snrnp200-201ENSMUST00000103220 NclP09405 707 aaKnown RBP12.86□□□□□ -0.35
Snrnp200-201ENSMUST00000103220 NeflP08551 543 aa12.86□□□□□ -0.35
Snrnp200-201ENSMUST00000103220 Myt1Q8CFC2 1127 aa12.86□□□□□ -0.35
Snrnp200-201ENSMUST00000103220 Gm13697A2AK42 830 aa12.85□□□□□ -0.35
Snrnp200-201ENSMUST00000103220 Npm1Q61937 292 aaKnown RBP12.84□□□□□ -0.35
Snrnp200-201ENSMUST00000103220 HrcG5E8J6 738 aa12.83□□□□□ -0.36
Snrnp200-201ENSMUST00000103220 Ccdc180J3QNE4 1664 aa12.82□□□□□ -0.36
Snrnp200-201ENSMUST00000103220 Pcgf6Q99NA9 353 aa12.79□□□□□ -0.36
Snrnp200-201ENSMUST00000103220 Ifnlr1Q8CGK5 535 aa12.77□□□□□ -0.37
Snrnp200-201ENSMUST00000103220 Zbtb7cQ8VCZ7 619 aa12.77□□□□□ -0.37
Snrnp200-201ENSMUST00000103220 Hnrnpul2Q00PI9 745 aaKnown RBP12.73□□□□□ -0.37
Snrnp200-201ENSMUST00000103220 Eif5bQ05D44 1216 aaKnown RBP12.7□□□□□ -0.38
Snrnp200-201ENSMUST00000103220 Nop58Q6DFW4 536 aaKnown RBP12.7□□□□□ -0.38
Snrnp200-201ENSMUST00000103220 Rtl1Q7M732 1744 aa12.67□□□□□ -0.38
Snrnp200-201ENSMUST00000103220 Atp1b4Q99ME6 356 aa12.64□□□□□ -0.39
Snrnp200-201ENSMUST00000103220 Supt5hO55201 1082 aaKnown RBP12.63□□□□□ -0.39
Snrnp200-201ENSMUST00000103220 Rtl5Q5DTT4 599 aa12.62□□□□□ -0.39
Snrnp200-201ENSMUST00000103220 Lmod2Q3UHZ5 550 aa12.62□□□□□ -0.39
Snrnp200-201ENSMUST00000103220 Chic1Q8CBW7 227 aa12.62□□□□□ -0.39
Snrnp200-201ENSMUST00000103220 Gm13695A2AK44 830 aa12.6□□□□□ -0.39
Snrnp200-201ENSMUST00000103220 Pds5bQ4VA53 1446 aaKnown RBP12.59□□□□□ -0.39
Snrnp200-201ENSMUST00000103220 Erich6D3Z6S9 713 aa12.58□□□□□ -0.4
Snrnp200-201ENSMUST00000103220 TonslQ6NZL6 1363 aa12.58□□□□□ -0.4
Snrnp200-201ENSMUST00000103220 Plppr3Q7TPB0 716 aa12.57□□□□□ -0.4
Snrnp200-201ENSMUST00000103220 Rb1cc1Q9ESK9 1588 aa12.54□□□□□ -0.4
Snrnp200-201ENSMUST00000103220 Gm38655A0A286YDK6 273 aa12.54□□□□□ -0.4
Snrnp200-201ENSMUST00000103220 Fkbp15Q6P9Q6 1216 aaKnown RBP12.51□□□□□ -0.41
Snrnp200-201ENSMUST00000103220 Crybg2B7ZCC2 1516 aa12.5□□□□□ -0.41
Snrnp200-201ENSMUST00000103220 Hdac5Q9Z2V6 1113 aa12.5□□□□□ -0.41
Snrnp200-201ENSMUST00000103220 Zbtb4Q5F293 982 aa12.47□□□□□ -0.41
Snrnp200-201ENSMUST00000103220 Ercc6F8VPZ5 1481 aa12.47□□□□□ -0.41
Snrnp200-201ENSMUST00000103220 Nlrp6Q91WS2 869 aa12.46□□□□□ -0.41
Snrnp200-201ENSMUST00000103220 Plekhg3Q4VAC9 1341 aa12.45□□□□□ -0.42
Snrnp200-201ENSMUST00000103220 DiexfQ8BTT6 772 aaKnown RBP12.44□□□□□ -0.42
Snrnp200-201ENSMUST00000103220 Prdm10Q3UTQ7 1184 aa12.41□□□□□ -0.42
Snrnp200-201ENSMUST00000103220 Kdm5dQ62240 1548 aa12.41□□□□□ -0.42
Snrnp200-201ENSMUST00000103220 Baz1bQ9Z277 1479 aa12.4□□□□□ -0.42
Snrnp200-201ENSMUST00000103220 Sycp2Q9CUU3 1500 aa12.4□□□□□ -0.43
Snrnp200-201ENSMUST00000103220 Brd4Q9ESU6 1400 aaKnown RBP12.39□□□□□ -0.43
Snrnp200-201ENSMUST00000103220 Ubl4bQ9CQ84 188 aa12.38□□□□□ -0.43
Snrnp200-201ENSMUST00000103220 Mier1Q5UAK0 511 aa12.36□□□□□ -0.43
Snrnp200-201ENSMUST00000103220 Safb2Q80YR5 991 aaKnown RBP12.35□□□□□ -0.43
Snrnp200-201ENSMUST00000103220 Polr3glQ8R0C0 218 aa12.34□□□□□ -0.43
Snrnp200-201ENSMUST00000103220 Baz1aO88379 1555 aa12.34□□□□□ -0.43
Snrnp200-201ENSMUST00000103220 Anp32aO35381 247 aa12.33□□□□□ -0.44
Snrnp200-201ENSMUST00000103220 DaxxO35613 739 aa12.3□□□□□ -0.44
Snrnp200-201ENSMUST00000103220 ClspnQ80YR7 1315 aa12.26□□□□□ -0.45
Snrnp200-201ENSMUST00000103220 Mapk8ip2Q9ERE9 830 aa12.25□□□□□ -0.45
Snrnp200-201ENSMUST00000103220 Csrnp3P59055 597 aa12.24□□□□□ -0.45
Snrnp200-201ENSMUST00000103220 Atad2bE9Q166 1460 aaKnown RBP12.22□□□□□ -0.45
Snrnp200-201ENSMUST00000103220 Clip1Q922J3 1391 aa12.2□□□□□ -0.46
Snrnp200-201ENSMUST00000103220 ArxO35085 564 aa12.19□□□□□ -0.46
Snrnp200-201ENSMUST00000103220 ScribQ80U72 1612 aa12.18□□□□□ -0.46
Snrnp200-201ENSMUST00000103220 P3h3Q8CG70 732 aa12.15□□□□□ -0.47
Snrnp200-201ENSMUST00000103220 Clstn2Q9ER65 966 aa12.15□□□□□ -0.47
Snrnp200-201ENSMUST00000103220 Ccer2J3QPU5 274 aa12.14□□□□□ -0.47
Snrnp200-201ENSMUST00000103220 Eid3Q3V124 375 aa12.14□□□□□ -0.47
Snrnp200-201ENSMUST00000103220 Rangap1P46061 589 aaKnown RBP12.11□□□□□ -0.47
Retrieved 100 of 22,080 RNA–protein pairs in 186.9 ms