RNA–Protein interactions for RNA: ENSMUST00000033378.12

Ebf3-201, Transcript of Transcription factor COE3, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Ebf3, Length 4,838 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3-201ENSMUST00000033378 Cfap99A0A140LIX9 648 aa22.14■■□□□ 1.14
Ebf3-201ENSMUST00000033378 Cnnm3Q32NY4 713 aa22.14■■□□□ 1.14
Ebf3-201ENSMUST00000033378 Nop14Q8R3N1 860 aaKnown RBP22.14■■□□□ 1.14
Ebf3-201ENSMUST00000033378 MvpQ9EQK5 861 aa22.14■■□□□ 1.14
Ebf3-201ENSMUST00000033378 Asxl1P59598 1514 aa22.14■■□□□ 1.14
Ebf3-201ENSMUST00000033378 Krt82Q99M74 516 aa22.14■■□□□ 1.14
Ebf3-201ENSMUST00000033378 Wdr78E9PYY5 807 aa22.14■■□□□ 1.13
Ebf3-201ENSMUST00000033378 Gsdma3Q5Y4Y6 464 aa22.14■■□□□ 1.13
Ebf3-201ENSMUST00000033378 Ipo7Q9EPL8 1038 aaKnown RBP22.13■■□□□ 1.13
Ebf3-201ENSMUST00000033378 Urb2E9Q7L1 1524 aaKnown RBP22.13■■□□□ 1.13
Ebf3-201ENSMUST00000033378 A0A0U1RNP2 1173 aa22.13■■□□□ 1.13
Ebf3-201ENSMUST00000033378 Cwc27Q3TKY6 469 aa22.13■■□□□ 1.13
Ebf3-201ENSMUST00000033378 Znhit6Q3UFB2 460 aaKnown RBP22.13■■□□□ 1.13
Ebf3-201ENSMUST00000033378 Rprd2Q6NXI6 1469 aaKnown RBP22.12■■□□□ 1.13
Ebf3-201ENSMUST00000033378 Map4k4P97820 1233 aaKnown RBP22.12■■□□□ 1.13
Ebf3-201ENSMUST00000033378 PalmQ9Z0P4 383 aa22.12■■□□□ 1.13
Ebf3-201ENSMUST00000033378 A0A1L1SQF0 893 aa22.11■■□□□ 1.13
Ebf3-201ENSMUST00000033378 Arid4aF8VPQ2 1261 aaKnown RBP22.11■■□□□ 1.13
Ebf3-201ENSMUST00000033378 Srgap3Q812A2 1099 aa22.1■■□□□ 1.13
Ebf3-201ENSMUST00000033378 NexmifQ5DTT1 1515 aa22.1■■□□□ 1.13
Ebf3-201ENSMUST00000033378 Mns1Q61884 491 aa22.09■■□□□ 1.13
Ebf3-201ENSMUST00000033378 Polr3aB2RXC6 1390 aa22.09■■□□□ 1.13
Ebf3-201ENSMUST00000033378 Wwc1Q5SXA9 1104 aa22.09■■□□□ 1.13
Ebf3-201ENSMUST00000033378 Gm1043A0A140LJC2 1431 aa22.09■■□□□ 1.13
Ebf3-201ENSMUST00000033378 TnmdQ9EP64 317 aa22.08■■□□□ 1.13
Ebf3-201ENSMUST00000033378 Fchsd2Q3USJ8 740 aa22.08■■□□□ 1.12
Ebf3-201ENSMUST00000033378 Aldh1l1Q8R0Y6 902 aa22.08■■□□□ 1.12
Ebf3-201ENSMUST00000033378 Cdk19Q8BWD8 501 aa22.07■■□□□ 1.12
Ebf3-201ENSMUST00000033378 Mug1P28665 1476 aa22.07■■□□□ 1.12
Ebf3-201ENSMUST00000033378 Cpa2Q504N0 417 aa22.06■■□□□ 1.12
Ebf3-201ENSMUST00000033378 Terf2O35144 541 aa22.06■■□□□ 1.12
Ebf3-201ENSMUST00000033378 Ggnbp2Q5SV77 696 aa22.06■■□□□ 1.12
Ebf3-201ENSMUST00000033378 HypkQ9CR41 129 aa22.06■■□□□ 1.12
Ebf3-201ENSMUST00000033378 Fam184aE9PW83 1143 aa22.06■■□□□ 1.12
Ebf3-201ENSMUST00000033378 CastP51125 788 aa22.05■■□□□ 1.12
Ebf3-201ENSMUST00000033378 Hs1bp3Q3TC93 395 aa22.05■■□□□ 1.12
Ebf3-201ENSMUST00000033378 Samm50Q8BGH2 469 aa22.05■■□□□ 1.12
Ebf3-201ENSMUST00000033378 NcapgE9PWG6 1004 aa22.04■■□□□ 1.12
Ebf3-201ENSMUST00000033378 Fam193aQ8CGI1 1231 aaKnown RBP22.04■■□□□ 1.12
Ebf3-201ENSMUST00000033378 Fyb1O35601 819 aa22.04■■□□□ 1.12
Ebf3-201ENSMUST00000033378 Mctp1E9PV86 951 aa22.04■■□□□ 1.12
Ebf3-201ENSMUST00000033378 Gcom1E9PZ54 550 aa22.03■■□□□ 1.12
Ebf3-201ENSMUST00000033378 MyzapQ3UIJ9 466 aa22.03■■□□□ 1.12
Ebf3-201ENSMUST00000033378 CrcpO35427 148 aa22.03■■□□□ 1.12
Ebf3-201ENSMUST00000033378 Ftsj3Q9DBE9 838 aaKnown RBP22.03■■□□□ 1.12
Ebf3-201ENSMUST00000033378 Me1P06801 572 aa22.03■■□□□ 1.12
Ebf3-201ENSMUST00000033378 Fkbp4P30416 458 aa22.03■■□□□ 1.12
Ebf3-201ENSMUST00000033378 Plekhm2Q80TQ5 1018 aa22.03■■□□□ 1.12
Ebf3-201ENSMUST00000033378 Frmd3Q8BHD4 595 aa22.03■■□□□ 1.12
Ebf3-201ENSMUST00000033378 TatQ8QZR1 454 aa22.03■■□□□ 1.12
Ebf3-201ENSMUST00000033378 ImpactO55091 318 aa22.02■■□□□ 1.12
Ebf3-201ENSMUST00000033378 Tpm4Q6IRU2 248 aa22.02■■□□□ 1.12
Ebf3-201ENSMUST00000033378 Ptpdc1Q6NZK8 747 aa22.02■■□□□ 1.12
Ebf3-201ENSMUST00000033378 Egfem1Q8C088 590 aa22.02■■□□□ 1.12
Ebf3-201ENSMUST00000033378 Smarca5Q91ZW3 1051 aaKnown RBP22.02■■□□□ 1.12
Ebf3-201ENSMUST00000033378 Sall3Q62255 1320 aa22.02■■□□□ 1.12
Ebf3-201ENSMUST00000033378 Phlpp2Q8BXA7 1320 aa22.02■■□□□ 1.12
Ebf3-201ENSMUST00000033378 Frmpd1A2AKB4 1549 aa22.02■■□□□ 1.12
Ebf3-201ENSMUST00000033378 Rfx7F8VPJ6 1459 aa22.02■■□□□ 1.12
Ebf3-201ENSMUST00000033378 3425401B19RikD3Z1D3 1412 aa22.01■■□□□ 1.11
Ebf3-201ENSMUST00000033378 Med4Q9CQA5 270 aa22.01■■□□□ 1.11
Ebf3-201ENSMUST00000033378 DmtnQ9WV69 405 aa22.01■■□□□ 1.11
Ebf3-201ENSMUST00000033378 Tmco3Q8BH01 678 aa22■■□□□ 1.11
Ebf3-201ENSMUST00000033378 Top1mtQ8R4U6 593 aa22■■□□□ 1.11
Ebf3-201ENSMUST00000033378 Nup88Q8CEC0 753 aaKnown RBP22■■□□□ 1.11
Ebf3-201ENSMUST00000033378 Stk38Q91VJ4 465 aa22■■□□□ 1.11
Ebf3-201ENSMUST00000033378 Rcan3Q9JKK0 239 aa22■■□□□ 1.11
Ebf3-201ENSMUST00000033378 Krt85Q9Z2T6 507 aa22■■□□□ 1.11
Ebf3-201ENSMUST00000033378 Pmfbp1Q9WVQ0 1022 aa22■■□□□ 1.11
Ebf3-201ENSMUST00000033378 Tmc1Q8R4P5 757 aa21.99■■□□□ 1.11
Ebf3-201ENSMUST00000033378 Nol8Q3UHX0 1147 aaKnown RBP21.98■■□□□ 1.11
Ebf3-201ENSMUST00000033378 Ccdc141E9Q8Q6 1531 aa21.98■■□□□ 1.11
Ebf3-201ENSMUST00000033378 Kri1Q8VDQ9 704 aaKnown RBP21.98■■□□□ 1.11
Ebf3-201ENSMUST00000033378 Camsap1A2AHC3 1581 aa21.98■■□□□ 1.11
Ebf3-201ENSMUST00000033378 Tbc1d32Q3URV1 1296 aa21.97■■□□□ 1.11
Ebf3-201ENSMUST00000033378 Ggt6Q6PDE7 497 aa21.97■■□□□ 1.11
Ebf3-201ENSMUST00000033378 Bag4Q8CI61 457 aa21.97■■□□□ 1.11
Ebf3-201ENSMUST00000033378 Pik3c2gO70167 1506 aa21.97■■□□□ 1.11
Ebf3-201ENSMUST00000033378 Gtf2f1Q3THK3 508 aaKnown RBP21.97■■□□□ 1.11
Ebf3-201ENSMUST00000033378 Q3UPC7 1272 aa21.97■■□□□ 1.11
Ebf3-201ENSMUST00000033378 Tbc1d9Q3UYK3 1264 aa21.97■■□□□ 1.11
Ebf3-201ENSMUST00000033378 BcanQ61361 883 aa21.96■■□□□ 1.11
Ebf3-201ENSMUST00000033378 Zrsr2Q62377 462 aaKnown RBP21.96■■□□□ 1.11
Ebf3-201ENSMUST00000033378 PsapQ61207 557 aaKnown RBP21.96■■□□□ 1.11
Ebf3-201ENSMUST00000033378 Slx4Q6P1D7 1565 aa21.95■■□□□ 1.11
Ebf3-201ENSMUST00000033378 Ccp110Q7TSH4 1004 aa21.95■■□□□ 1.1
Ebf3-201ENSMUST00000033378 NefhP19246 1090 aa21.95■■□□□ 1.1
Ebf3-201ENSMUST00000033378 Pof1bQ8K4L4 587 aa21.95■■□□□ 1.1
Ebf3-201ENSMUST00000033378 IbtkQ6ZPR6 1352 aaKnown RBP21.95■■□□□ 1.1
Ebf3-201ENSMUST00000033378 Larp1bA0A0A6YXJ7 370 aaKnown RBP21.95■■□□□ 1.1
Ebf3-201ENSMUST00000033378 Rasa1E9PYG6 1038 aa21.95■■□□□ 1.1
Ebf3-201ENSMUST00000033378 Duxf3A0A0N4SV92 674 aa21.94■■□□□ 1.1
Ebf3-201ENSMUST00000033378 Cep57l1Q8VDS7 400 aa21.94■■□□□ 1.1
Ebf3-201ENSMUST00000033378 Tubb6Q922F4 447 aa21.94■■□□□ 1.1
Ebf3-201ENSMUST00000033378 Prkar2bP31324 416 aa21.94■■□□□ 1.1
Ebf3-201ENSMUST00000033378 TmpoQ61033 693 aaKnown RBP21.94■■□□□ 1.1
Ebf3-201ENSMUST00000033378 Gm10471E9Q1C7 252 aa21.94■■□□□ 1.1
Ebf3-201ENSMUST00000033378 Map3k13Q1HKZ5 959 aa21.93■■□□□ 1.1
Ebf3-201ENSMUST00000033378 Uspl1Q3ULM6 1089 aa21.93■■□□□ 1.1
Ebf3-201ENSMUST00000033378 4931400O07RikQ9D4M5 137 aa21.93■■□□□ 1.1
Retrieved 100 of 22,080 RNA–protein pairs in 15.5 ms