RNA–Protein interactions for RNA: ENSMUST00000029139.8

Trim55-201, Transcript of MCG19772, mousemouse

APPRIS P1 TSL 2 BASIC

Gene Trim55, Length 2,595 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55-201ENSMUST00000029139 Rwdd1Q9CQK7 243 aa14.11□□□□□ -0.15
Trim55-201ENSMUST00000029139 Cep83Q9D5R3 692 aa14.11□□□□□ -0.15
Trim55-201ENSMUST00000029139 Vps8Q0P5W1 1427 aa14.11□□□□□ -0.15
Trim55-201ENSMUST00000029139 Arid3cA6PWV5 409 aa14.11□□□□□ -0.15
Trim55-201ENSMUST00000029139 Ddx41Q91VN6 622 aaKnown RBP14.11□□□□□ -0.15
Trim55-201ENSMUST00000029139 Cavin1O54724 392 aa14.1□□□□□ -0.15
Trim55-201ENSMUST00000029139 Kif2aP28740 705 aa14.1□□□□□ -0.15
Trim55-201ENSMUST00000029139 Pcdhgc5Q91XW9 944 aa14.1□□□□□ -0.15
Trim55-201ENSMUST00000029139 RbsnQ80Y56 783 aa14.1□□□□□ -0.15
Trim55-201ENSMUST00000029139 Rapgef6Q5NCJ1 1609 aa14.09□□□□□ -0.15
Trim55-201ENSMUST00000029139 Zscan25B2RX31 543 aa14.09□□□□□ -0.15
Trim55-201ENSMUST00000029139 Trim30aP15533 496 aa14.09□□□□□ -0.15
Trim55-201ENSMUST00000029139 Ecm2Q5FW85 670 aa14.09□□□□□ -0.15
Trim55-201ENSMUST00000029139 Ulbp1Q8HWA3 334 aa14.09□□□□□ -0.15
Trim55-201ENSMUST00000029139 Rcan3Q9JKK0 239 aa14.09□□□□□ -0.15
Trim55-201ENSMUST00000029139 4930548H24RikQ9D496 437 aa14.09□□□□□ -0.15
Trim55-201ENSMUST00000029139 Polr1aO35134 1717 aaKnown RBP14.08□□□□□ -0.16
Trim55-201ENSMUST00000029139 Ltbp4Q8K4G1 1666 aa14.08□□□□□ -0.16
Trim55-201ENSMUST00000029139 Ppm1eQ80TL0 749 aa14.08□□□□□ -0.16
Trim55-201ENSMUST00000029139 Gtf2e1Q9D0D5 440 aa14.08□□□□□ -0.16
Trim55-201ENSMUST00000029139 Tiam1Q60610 1591 aa14.07□□□□□ -0.16
Trim55-201ENSMUST00000029139 Vsig10D3YX43 558 aa14.07□□□□□ -0.16
Trim55-201ENSMUST00000029139 CtifQ6PEE2 600 aaKnown RBP14.07□□□□□ -0.16
Trim55-201ENSMUST00000029139 Zkscan5Q9Z1D8 819 aa14.07□□□□□ -0.16
Trim55-201ENSMUST00000029139 Gm11983V9GXS8 105 aa14.07□□□□□ -0.16
Trim55-201ENSMUST00000029139 Serpina10Q8R121 448 aa14.07□□□□□ -0.16
Trim55-201ENSMUST00000029139 Anp32eP97822 260 aaKnown RBP14.06□□□□□ -0.16
Trim55-201ENSMUST00000029139 Nol10Q5RJG1 687 aaKnown RBP14.06□□□□□ -0.16
Trim55-201ENSMUST00000029139 Anapc4Q91W96 807 aa14.06□□□□□ -0.16
Trim55-201ENSMUST00000029139 Shroom4Q1W617 1475 aa14.06□□□□□ -0.16
Trim55-201ENSMUST00000029139 Arhgap35Q91YM2 1499 aa14.06□□□□□ -0.16
Trim55-201ENSMUST00000029139 Tbc1d4Q8BYJ6 1307 aa14.06□□□□□ -0.16
Trim55-201ENSMUST00000029139 Ppp2r3aB2RXC8 1150 aa14.05□□□□□ -0.16
Trim55-201ENSMUST00000029139 Map2k1P31938 393 aa14.05□□□□□ -0.16
Trim55-201ENSMUST00000029139 KarsQ99MN1 595 aaKnown RBP14.05□□□□□ -0.16
Trim55-201ENSMUST00000029139 4931400O07RikQ9D4M5 137 aa14.05□□□□□ -0.16
Trim55-201ENSMUST00000029139 Atp10dQ8K2X1 1416 aa14.05□□□□□ -0.16
Trim55-201ENSMUST00000029139 Npm2Q80W85 207 aa14.05□□□□□ -0.16
Trim55-201ENSMUST00000029139 Ylpm1Q9R0I7 1386 aaKnown RBP14.04□□□□□ -0.16
Trim55-201ENSMUST00000029139 ImpactO55091 318 aa14.04□□□□□ -0.16
Trim55-201ENSMUST00000029139 Zscan21Q07231 555 aa14.04□□□□□ -0.16
Trim55-201ENSMUST00000029139 Taf3Q5HZG4 932 aa14.04□□□□□ -0.16
Trim55-201ENSMUST00000029139 Cc2d1aQ8K1A6 943 aa14.04□□□□□ -0.16
Trim55-201ENSMUST00000029139 Kif16bB1AVY7 1312 aa14.04□□□□□ -0.16
Trim55-201ENSMUST00000029139 Myom3A2ABU4 1439 aa14.04□□□□□ -0.16
Trim55-201ENSMUST00000029139 Fhod3Q76LL6 1578 aa14.03□□□□□ -0.16
Trim55-201ENSMUST00000029139 Il16O54824 1322 aa14.03□□□□□ -0.16
Trim55-201ENSMUST00000029139 Topaz1E5FYH1 1653 aa14.03□□□□□ -0.16
Trim55-201ENSMUST00000029139 Slc7a3P70423 618 aa14.03□□□□□ -0.16
Trim55-201ENSMUST00000029139 Cgref1Q8R1U2 281 aa14.03□□□□□ -0.16
Trim55-201ENSMUST00000029139 Trim66Q924W6 1242 aa14.03□□□□□ -0.16
Trim55-201ENSMUST00000029139 Bcl9Q9D219 1425 aa14.03□□□□□ -0.16
Trim55-201ENSMUST00000029139 Nxf2Q4ZGD8 691 aa14.02□□□□□ -0.16
Trim55-201ENSMUST00000029139 Ccdc173A0JLY1 547 aa14.02□□□□□ -0.17
Trim55-201ENSMUST00000029139 Kdm4aQ8BW72 1064 aa14.02□□□□□ -0.17
Trim55-201ENSMUST00000029139 Paf1Q8K2T8 535 aa14.02□□□□□ -0.17
Trim55-201ENSMUST00000029139 Zkscan3Q91VW9 553 aa14.02□□□□□ -0.17
Trim55-201ENSMUST00000029139 MvpQ9EQK5 861 aa14.02□□□□□ -0.17
Trim55-201ENSMUST00000029139 CalrP14211 416 aaKnown RBP14.01□□□□□ -0.17
Trim55-201ENSMUST00000029139 Plekhh1Q80TI1 1356 aa14□□□□□ -0.17
Trim55-201ENSMUST00000029139 Gcc2Q8CHG3 1679 aa14□□□□□ -0.17
Trim55-201ENSMUST00000029139 Rai14Q9EP71 979 aaKnown RBP14□□□□□ -0.17
Trim55-201ENSMUST00000029139 Pnmal2G3X9N3 661 aa13.99□□□□□ -0.17
Trim55-201ENSMUST00000029139 Zkscan4Q5SZT6 480 aa13.99□□□□□ -0.17
Trim55-201ENSMUST00000029139 Stk26Q99JT2 416 aa13.99□□□□□ -0.17
Trim55-201ENSMUST00000029139 Dydc1Q9D9T0 175 aa13.99□□□□□ -0.17
Trim55-201ENSMUST00000029139 Cpsf1Q9EPU4 1441 aaKnown RBP13.99□□□□□ -0.17
Trim55-201ENSMUST00000029139 Hvcn1Q3U2S8 269 aa13.98□□□□□ -0.17
Trim55-201ENSMUST00000029139 Nsfl1cQ9CZ44 370 aaKnown RBP13.98□□□□□ -0.17
Trim55-201ENSMUST00000029139 Abca6Q8K441 1624 aa13.98□□□□□ -0.17
Trim55-201ENSMUST00000029139 NpatQ8BMA5 1420 aa13.98□□□□□ -0.17
Trim55-201ENSMUST00000029139 Gli3Q61602 1583 aa13.98□□□□□ -0.17
Trim55-201ENSMUST00000029139 Ttc21aQ8C0S4 1314 aa13.98□□□□□ -0.17
Trim55-201ENSMUST00000029139 Bach2P97303 839 aa13.98□□□□□ -0.17
Trim55-201ENSMUST00000029139 Cavin2Q63918 418 aaKnown RBP13.97□□□□□ -0.17
Trim55-201ENSMUST00000029139 Ddx46Q569Z5 1032 aaKnown RBP13.97□□□□□ -0.17
Trim55-201ENSMUST00000029139 Bag4Q8CI61 457 aa13.97□□□□□ -0.17
Trim55-201ENSMUST00000029139 Phlpp1Q8CHE4 1687 aa13.97□□□□□ -0.17
Trim55-201ENSMUST00000029139 AppP12023 770 aa13.96□□□□□ -0.17
Trim55-201ENSMUST00000029139 Rfx1P48377 963 aa13.96□□□□□ -0.17
Trim55-201ENSMUST00000029139 Trerf1Q8BXJ2 1205 aa13.96□□□□□ -0.17
Trim55-201ENSMUST00000029139 Dip2bQ3UH60 1574 aa13.96□□□□□ -0.17
Trim55-201ENSMUST00000029139 Klra1P20937 262 aa13.96□□□□□ -0.17
Trim55-201ENSMUST00000029139 Q8VDP2 222 aa13.96□□□□□ -0.17
Trim55-201ENSMUST00000029139 Saal1Q9D2C2 474 aa13.96□□□□□ -0.17
Trim55-201ENSMUST00000029139 PdiltQ9DAN1 588 aa13.96□□□□□ -0.17
Trim55-201ENSMUST00000029139 SufuQ9Z0P7 484 aa13.95□□□□□ -0.18
Trim55-201ENSMUST00000029139 Letm1Q9Z2I0 738 aa13.95□□□□□ -0.18
Trim55-201ENSMUST00000029139 Ncapd2Q8K2Z4 1392 aa13.95□□□□□ -0.18
Trim55-201ENSMUST00000029139 Dnai2A2AC93 623 aa13.95□□□□□ -0.18
Trim55-201ENSMUST00000029139 Smc2Q8CG48 1191 aaKnown RBP13.95□□□□□ -0.18
Trim55-201ENSMUST00000029139 Rab11fip3Q8CHD8 1047 aa13.95□□□□□ -0.18
Trim55-201ENSMUST00000029139 Polr3glQ8R0C0 218 aa13.95□□□□□ -0.18
Trim55-201ENSMUST00000029139 Kif2cQ922S8 721 aa13.95□□□□□ -0.18
Trim55-201ENSMUST00000029139 PzpQ61838 1495 aa13.94□□□□□ -0.18
Trim55-201ENSMUST00000029139 Lcmt1A0A0U1RNF2 332 aa13.94□□□□□ -0.18
Trim55-201ENSMUST00000029139 Rpgrip1lQ8CG73 1264 aa13.94□□□□□ -0.18
Trim55-201ENSMUST00000029139 Myo1cQ9WTI7 1063 aa13.94□□□□□ -0.18
Trim55-201ENSMUST00000029139 CenpqQ9CPQ5 267 aa13.94□□□□□ -0.18
Trim55-201ENSMUST00000029139 Arhgap23Q69ZH9 1483 aa13.94□□□□□ -0.18
Retrieved 100 of 22,080 RNA–protein pairs in 33.6 ms