Protein–RNA interactions for Protein: Q8R1U2

Cgref1, Cell growth regulator with EF hand domain protein 1, mousemouse

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cgref1Q8R1U2 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC34.03■■■■□ 3.04
Cgref1Q8R1U2 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC33.73■■■□□ 2.99
Cgref1Q8R1U2 Gm25239-201ENSMUST00000174915 86 ntBASIC33.67■■■□□ 2.98
Cgref1Q8R1U2 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC33.2■■■□□ 2.91
Cgref1Q8R1U2 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
Cgref1Q8R1U2 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC32.6■■■□□ 2.81
Cgref1Q8R1U2 Psd-208ENSMUST00000224556 2034 ntBASIC32.15■■■□□ 2.74
Cgref1Q8R1U2 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
Cgref1Q8R1U2 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
Cgref1Q8R1U2 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC30.9■■■□□ 2.54
Cgref1Q8R1U2 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
Cgref1Q8R1U2 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC30.79■■■□□ 2.52
Cgref1Q8R1U2 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
Cgref1Q8R1U2 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC30.72■■■□□ 2.51
Cgref1Q8R1U2 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
Cgref1Q8R1U2 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
Cgref1Q8R1U2 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC30.66■■■□□ 2.5
Cgref1Q8R1U2 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
Cgref1Q8R1U2 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
Cgref1Q8R1U2 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
Cgref1Q8R1U2 Gm15042-201ENSMUST00000120212 883 ntBASIC30.36■■■□□ 2.45
Cgref1Q8R1U2 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
Cgref1Q8R1U2 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
Cgref1Q8R1U2 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
Cgref1Q8R1U2 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC30.17■■■□□ 2.42
Cgref1Q8R1U2 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC30.11■■■□□ 2.41
Cgref1Q8R1U2 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
Cgref1Q8R1U2 Gm42596-201ENSMUST00000196305 1958 ntBASIC29.95■■■□□ 2.39
Cgref1Q8R1U2 Gm15045-201ENSMUST00000117359 883 ntBASIC29.81■■■□□ 2.36
Cgref1Q8R1U2 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC29.73■■■□□ 2.35
Cgref1Q8R1U2 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
Cgref1Q8R1U2 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
Cgref1Q8R1U2 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC29.5■■■□□ 2.31
Cgref1Q8R1U2 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC29.46■■■□□ 2.31
Cgref1Q8R1U2 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC29.38■■■□□ 2.29
Cgref1Q8R1U2 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC29.36■■■□□ 2.29
Cgref1Q8R1U2 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC29.26■■■□□ 2.28
Cgref1Q8R1U2 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC29.22■■■□□ 2.27
Cgref1Q8R1U2 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
Cgref1Q8R1U2 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
Cgref1Q8R1U2 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC29.18■■■□□ 2.26
Cgref1Q8R1U2 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC29.16■■■□□ 2.26
Cgref1Q8R1U2 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC29.13■■■□□ 2.25
Cgref1Q8R1U2 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC29.08■■■□□ 2.25
Cgref1Q8R1U2 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
Cgref1Q8R1U2 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
Cgref1Q8R1U2 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
Cgref1Q8R1U2 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC28.89■■■□□ 2.21
Cgref1Q8R1U2 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
Cgref1Q8R1U2 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC28.85■■■□□ 2.21
Cgref1Q8R1U2 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
Cgref1Q8R1U2 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC28.83■■■□□ 2.2
Cgref1Q8R1U2 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
Cgref1Q8R1U2 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
Cgref1Q8R1U2 Gm24109-201ENSMUST00000175489 103 ntBASIC28.75■■■□□ 2.19
Cgref1Q8R1U2 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC28.73■■■□□ 2.19
Cgref1Q8R1U2 Gm10524-201ENSMUST00000181931 1893 ntBASIC28.69■■■□□ 2.18
Cgref1Q8R1U2 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
Cgref1Q8R1U2 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
Cgref1Q8R1U2 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC28.63■■■□□ 2.17
Cgref1Q8R1U2 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC28.63■■■□□ 2.17
Cgref1Q8R1U2 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC28.63■■■□□ 2.17
Cgref1Q8R1U2 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC28.62■■■□□ 2.17
Cgref1Q8R1U2 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC28.58■■■□□ 2.17
Cgref1Q8R1U2 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
Cgref1Q8R1U2 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC28.54■■■□□ 2.16
Cgref1Q8R1U2 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
Cgref1Q8R1U2 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
Cgref1Q8R1U2 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC28.36■■■□□ 2.13
Cgref1Q8R1U2 Gm23366-201ENSMUST00000175022 89 ntBASIC28.29■■■□□ 2.12
Cgref1Q8R1U2 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC28.28■■■□□ 2.12
Cgref1Q8R1U2 Zxda-201ENSMUST00000117281 2621 ntBASIC28.27■■■□□ 2.12
Cgref1Q8R1U2 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Cgref1Q8R1U2 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Cgref1Q8R1U2 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Cgref1Q8R1U2 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC28.22■■■□□ 2.11
Cgref1Q8R1U2 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC28.2■■■□□ 2.11
Cgref1Q8R1U2 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Cgref1Q8R1U2 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC28.1■■■□□ 2.09
Cgref1Q8R1U2 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
Cgref1Q8R1U2 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
Cgref1Q8R1U2 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
Cgref1Q8R1U2 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC28.01■■■□□ 2.08
Cgref1Q8R1U2 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
Cgref1Q8R1U2 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
Cgref1Q8R1U2 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
Cgref1Q8R1U2 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
Cgref1Q8R1U2 AC153911.1-202ENSMUST00000218534 1034 ntBASIC27.86■■■□□ 2.05
Cgref1Q8R1U2 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC27.85■■■□□ 2.05
Cgref1Q8R1U2 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC27.85■■■□□ 2.05
Cgref1Q8R1U2 CT025624.2-201ENSMUST00000223609 1909 ntBASIC27.84■■■□□ 2.05
Cgref1Q8R1U2 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC27.81■■■□□ 2.04
Cgref1Q8R1U2 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
Cgref1Q8R1U2 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
Cgref1Q8R1U2 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
Cgref1Q8R1U2 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
Cgref1Q8R1U2 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
Cgref1Q8R1U2 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC27.68■■■□□ 2.02
Cgref1Q8R1U2 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC27.66■■■□□ 2.02
Cgref1Q8R1U2 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
Retrieved 100 of 76,532 protein–RNA pairs in 144.8 ms