RNA–Protein interactions for RNA: ENSMUST00000029139.8

Trim55-201, Transcript of MCG19772, mousemouse

APPRIS P1 TSL 2 BASIC

Gene Trim55, Length 2,595 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55-201ENSMUST00000029139 Gm35339A0A140LHH9 1649 aa20.56■□□□□ 0.88
Trim55-201ENSMUST00000029139 Rpgrip1Q9EPQ2 1331 aa20.24■□□□□ 0.83
Trim55-201ENSMUST00000029139 Pcgf6Q99NA9 353 aa19.51■□□□□ 0.71
Trim55-201ENSMUST00000029139 Abcc9P70170 1546 aa19.49■□□□□ 0.71
Trim55-201ENSMUST00000029139 Myt1Q8CFC2 1127 aa19.23■□□□□ 0.67
Trim55-201ENSMUST00000029139 NischQ80TM9 1593 aa19.19■□□□□ 0.66
Trim55-201ENSMUST00000029139 DiexfQ8BTT6 772 aaKnown RBP19.11■□□□□ 0.65
Trim55-201ENSMUST00000029139 ScribQ80U72 1612 aa19.05■□□□□ 0.64
Trim55-201ENSMUST00000029139 Acin1Q9JIX8 1338 aaKnown RBP19.03■□□□□ 0.64
Trim55-201ENSMUST00000029139 Abcc8B2RUS7 1588 aa19.03■□□□□ 0.64
Trim55-201ENSMUST00000029139 Las1lA2BE28 776 aaKnown RBP19■□□□□ 0.63
Trim55-201ENSMUST00000029139 CenpbP27790 599 aa18.95■□□□□ 0.62
Trim55-201ENSMUST00000029139 Dnajc5bQ9CQ94 199 aa18.61■□□□□ 0.57
Trim55-201ENSMUST00000029139 Neurod1Q60867 357 aa18.61■□□□□ 0.57
Trim55-201ENSMUST00000029139 Bcl11aQ9QYE3 773 aa18.59■□□□□ 0.57
Trim55-201ENSMUST00000029139 Dnajc5P60904 198 aa18.53■□□□□ 0.56
Trim55-201ENSMUST00000029139 1700123L14RikQ3V2K7 440 aa18.48■□□□□ 0.55
Trim55-201ENSMUST00000029139 NacadQ5SWP3 1504 aa18.39■□□□□ 0.53
Trim55-201ENSMUST00000029139 Amer1Q7TS75 1132 aa18.32■□□□□ 0.52
Trim55-201ENSMUST00000029139 Rtl1Q7M732 1744 aa18.32■□□□□ 0.52
Trim55-201ENSMUST00000029139 Trim41Q5NCC3 630 aa18.31■□□□□ 0.52
Trim55-201ENSMUST00000029139 Supt5hO55201 1082 aaKnown RBP18.26■□□□□ 0.51
Trim55-201ENSMUST00000029139 Ccdc180J3QNE4 1664 aa18.23■□□□□ 0.51
Trim55-201ENSMUST00000029139 Thoc2B1AZI6 1594 aaKnown RBP18.21■□□□□ 0.51
Trim55-201ENSMUST00000029139 PrkcshO08795 521 aa18.07■□□□□ 0.48
Trim55-201ENSMUST00000029139 Kdm5dQ62240 1548 aa18.07■□□□□ 0.48
Trim55-201ENSMUST00000029139 Sycp2Q9CUU3 1500 aa18.06■□□□□ 0.48
Trim55-201ENSMUST00000029139 Aplp2Q06335 707 aa18.03■□□□□ 0.48
Trim55-201ENSMUST00000029139 Csrnp3P59055 597 aa18.01■□□□□ 0.47
Trim55-201ENSMUST00000029139 Anks4bQ8K3X6 423 aa18■□□□□ 0.47
Trim55-201ENSMUST00000029139 BicraF8VPZ9 1578 aa17.93■□□□□ 0.46
Trim55-201ENSMUST00000029139 Baz1bQ9Z277 1479 aa17.88■□□□□ 0.45
Trim55-201ENSMUST00000029139 Rhox8Q6VSS7 320 aa17.87■□□□□ 0.45
Trim55-201ENSMUST00000029139 Dcaf1Q80TR8 1506 aa17.82■□□□□ 0.44
Trim55-201ENSMUST00000029139 Ehmt2Q9Z148 1263 aaKnown RBP17.81■□□□□ 0.44
Trim55-201ENSMUST00000029139 Pds5bQ4VA53 1446 aaKnown RBP17.79■□□□□ 0.44
Trim55-201ENSMUST00000029139 Cngb1E1AZ71 1325 aa17.76■□□□□ 0.43
Trim55-201ENSMUST00000029139 Cc2d2aQ8CFW7 1633 aa17.58■□□□□ 0.41
Trim55-201ENSMUST00000029139 Fam135aQ6NS59 1506 aa17.57■□□□□ 0.4
Trim55-201ENSMUST00000029139 Ifnlr1Q8CGK5 535 aa17.47■□□□□ 0.39
Trim55-201ENSMUST00000029139 Atad2bE9Q166 1460 aaKnown RBP17.34■□□□□ 0.37
Trim55-201ENSMUST00000029139 Fam71e1A1L3C1 212 aa17.33■□□□□ 0.36
Trim55-201ENSMUST00000029139 Pknox2Q8BG99 474 aa17.3■□□□□ 0.36
Trim55-201ENSMUST00000029139 Sall2Q9QX96 1004 aa17.28■□□□□ 0.36
Trim55-201ENSMUST00000029139 Ercc6F8VPZ5 1481 aa17.28■□□□□ 0.36
Trim55-201ENSMUST00000029139 Gm38655A0A286YDK6 273 aa17.26■□□□□ 0.35
Trim55-201ENSMUST00000029139 Zeb1Q64318 1117 aa17.25■□□□□ 0.35
Trim55-201ENSMUST00000029139 Fgd1P52734 960 aa17.24■□□□□ 0.35
Trim55-201ENSMUST00000029139 NrdcQ8BHG1 1161 aa17.22■□□□□ 0.35
Trim55-201ENSMUST00000029139 CatipB9EKE5 520 aa17.2■□□□□ 0.34
Trim55-201ENSMUST00000029139 Cdk11bP24788 784 aaKnown RBP17.2■□□□□ 0.34
Trim55-201ENSMUST00000029139 Hdac5Q9Z2V6 1113 aa17.19■□□□□ 0.34
Trim55-201ENSMUST00000029139 Rtl5Q5DTT4 599 aa17.13■□□□□ 0.33
Trim55-201ENSMUST00000029139 Shroom2A2ALU4 1481 aa17.13■□□□□ 0.33
Trim55-201ENSMUST00000029139 Nop58Q6DFW4 536 aaKnown RBP17.04■□□□□ 0.32
Trim55-201ENSMUST00000029139 NefmP08553 848 aa17.04■□□□□ 0.32
Trim55-201ENSMUST00000029139 HrcG5E8J6 738 aa17.02■□□□□ 0.32
Trim55-201ENSMUST00000029139 Zcchc6Q5BLK4 1491 aaKnown RBP17.02■□□□□ 0.32
Trim55-201ENSMUST00000029139 Col17a1Q07563 1470 aa16.95■□□□□ 0.3
Trim55-201ENSMUST00000029139 Phldb1Q6PDH0 1371 aaKnown RBP16.93■□□□□ 0.3
Trim55-201ENSMUST00000029139 Smarca2Q6DIC0 1577 aa16.93■□□□□ 0.3
Trim55-201ENSMUST00000029139 Mrc2Q64449 1479 aa16.92■□□□□ 0.3
Trim55-201ENSMUST00000029139 Rb1cc1Q9ESK9 1588 aa16.9■□□□□ 0.3
Trim55-201ENSMUST00000029139 Pelp1Q9DBD5 1123 aaKnown RBP16.88■□□□□ 0.29
Trim55-201ENSMUST00000029139 Crybg2B7ZCC2 1516 aa16.88■□□□□ 0.29
Trim55-201ENSMUST00000029139 Wdr62Q3U3T8 1523 aa16.84■□□□□ 0.29
Trim55-201ENSMUST00000029139 Plppr3Q7TPB0 716 aa16.84■□□□□ 0.29
Trim55-201ENSMUST00000029139 Mapk8ip2Q9ERE9 830 aa16.83■□□□□ 0.28
Trim55-201ENSMUST00000029139 Gtf3c3Q3TMP1 882 aa16.81■□□□□ 0.28
Trim55-201ENSMUST00000029139 Anp32aO35381 247 aa16.75■□□□□ 0.27
Trim55-201ENSMUST00000029139 Gtf3c5Q8R2T8 520 aa16.75■□□□□ 0.27
Trim55-201ENSMUST00000029139 Rsf1E9PWW9 1441 aaKnown RBP16.74■□□□□ 0.27
Trim55-201ENSMUST00000029139 Tnnt3Q9QZ47 272 aa16.74■□□□□ 0.27
Trim55-201ENSMUST00000029139 Zcchc11B2RX14 1644 aaKnown RBP16.74■□□□□ 0.27
Trim55-201ENSMUST00000029139 Iqgap2Q3UQ44 1575 aa16.72■□□□□ 0.27
Trim55-201ENSMUST00000029139 Plcd4Q8K3R3 807 aa16.71■□□□□ 0.27
Trim55-201ENSMUST00000029139 Smarca4Q3TKT4 1613 aaKnown RBP16.71■□□□□ 0.26
Trim55-201ENSMUST00000029139 BccipQ9CWI3 316 aa16.7■□□□□ 0.26
Trim55-201ENSMUST00000029139 Frmpd1A2AKB4 1549 aa16.68■□□□□ 0.26
Trim55-201ENSMUST00000029139 SafbD3YXK2 937 aaKnown RBP16.68■□□□□ 0.26
Trim55-201ENSMUST00000029139 ClspnQ80YR7 1315 aa16.68■□□□□ 0.26
Trim55-201ENSMUST00000029139 Ccdc9Q8VC31 543 aaKnown RBP16.66■□□□□ 0.26
Trim55-201ENSMUST00000029139 Wdr66E9Q743 1299 aa16.65■□□□□ 0.26
Trim55-201ENSMUST00000029139 Lrriq1Q0P5X1 1673 aa16.64■□□□□ 0.25
Trim55-201ENSMUST00000029139 Upf2A2AT37 1269 aaKnown RBP16.62■□□□□ 0.25
Trim55-201ENSMUST00000029139 Irx3P81067 507 aa16.6■□□□□ 0.25
Trim55-201ENSMUST00000029139 Eif4g3Q80XI3 1579 aaKnown RBP16.59■□□□□ 0.25
Trim55-201ENSMUST00000029139 Hnrnpul2Q00PI9 745 aaKnown RBP16.58■□□□□ 0.24
Trim55-201ENSMUST00000029139 Ttbk1Q6PCN3 1308 aa16.58■□□□□ 0.24
Trim55-201ENSMUST00000029139 Top2bQ64511 1612 aa16.56■□□□□ 0.24
Trim55-201ENSMUST00000029139 Ipo4Q8VI75 1082 aa16.56■□□□□ 0.24
Trim55-201ENSMUST00000029139 Unc13aQ4KUS2 1712 aa16.55■□□□□ 0.24
Trim55-201ENSMUST00000029139 Il27Q8K3I6 234 aa16.51■□□□□ 0.23
Trim55-201ENSMUST00000029139 Aebp2Q9Z248 504 aaKnown RBP16.5■□□□□ 0.23
Trim55-201ENSMUST00000029139 Arhgef5E9Q7D5 1581 aa16.45■□□□□ 0.22
Trim55-201ENSMUST00000029139 Mier1Q5UAK0 511 aa16.44■□□□□ 0.22
Trim55-201ENSMUST00000029139 Ubl4bQ9CQ84 188 aa16.44■□□□□ 0.22
Trim55-201ENSMUST00000029139 Znf316Q6PGE4 1016 aa16.43■□□□□ 0.22
Trim55-201ENSMUST00000029139 Baz1aO88379 1555 aa16.42■□□□□ 0.22
Trim55-201ENSMUST00000029139 Zfp777B9EKF4 885 aa16.41■□□□□ 0.22
Retrieved 100 of 22,080 RNA–protein pairs in 130.1 ms