Protein–RNA interactions for Protein: A0A0U1RNF2

Lcmt1, Leucine carboxyl methyltransferase 1, mousemouse

Predictions only

Length 332 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lcmt1A0A0U1RNF2 Gm25239-201ENSMUST00000174915 86 ntBASIC40.26■■■■■ 4.04
Lcmt1A0A0U1RNF2 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC37.3■■■■□ 3.56
Lcmt1A0A0U1RNF2 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC36.91■■■■□ 3.5
Lcmt1A0A0U1RNF2 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC36.6■■■■□ 3.45
Lcmt1A0A0U1RNF2 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC36.43■■■■□ 3.42
Lcmt1A0A0U1RNF2 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC36.16■■■■□ 3.38
Lcmt1A0A0U1RNF2 Gm15042-201ENSMUST00000120212 883 ntBASIC35.79■■■■□ 3.32
Lcmt1A0A0U1RNF2 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC35.23■■■■□ 3.23
Lcmt1A0A0U1RNF2 Gm15045-201ENSMUST00000117359 883 ntBASIC35.04■■■■□ 3.2
Lcmt1A0A0U1RNF2 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC34.87■■■■□ 3.17
Lcmt1A0A0U1RNF2 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC34.61■■■■□ 3.13
Lcmt1A0A0U1RNF2 Psd-208ENSMUST00000224556 2034 ntBASIC34.6■■■■□ 3.13
Lcmt1A0A0U1RNF2 Gm24109-201ENSMUST00000175489 103 ntBASIC34.6■■■■□ 3.13
Lcmt1A0A0U1RNF2 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC34.52■■■■□ 3.12
Lcmt1A0A0U1RNF2 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC34.26■■■■□ 3.07
Lcmt1A0A0U1RNF2 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC34.25■■■■□ 3.07
Lcmt1A0A0U1RNF2 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC34.18■■■■□ 3.06
Lcmt1A0A0U1RNF2 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC33.97■■■■□ 3.03
Lcmt1A0A0U1RNF2 Gm23366-201ENSMUST00000175022 89 ntBASIC33.78■■■■□ 3
Lcmt1A0A0U1RNF2 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC33.73■■■□□ 2.99
Lcmt1A0A0U1RNF2 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC33.67■■■□□ 2.98
Lcmt1A0A0U1RNF2 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC33.62■■■□□ 2.97
Lcmt1A0A0U1RNF2 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC33.59■■■□□ 2.97
Lcmt1A0A0U1RNF2 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC33.56■■■□□ 2.96
Lcmt1A0A0U1RNF2 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC33.54■■■□□ 2.96
Lcmt1A0A0U1RNF2 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC33.46■■■□□ 2.95
Lcmt1A0A0U1RNF2 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC33.44■■■□□ 2.94
Lcmt1A0A0U1RNF2 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC33.41■■■□□ 2.94
Lcmt1A0A0U1RNF2 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC33.39■■■□□ 2.94
Lcmt1A0A0U1RNF2 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC33.35■■■□□ 2.93
Lcmt1A0A0U1RNF2 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC33.33■■■□□ 2.93
Lcmt1A0A0U1RNF2 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC33.17■■■□□ 2.9
Lcmt1A0A0U1RNF2 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC33.07■■■□□ 2.88
Lcmt1A0A0U1RNF2 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC32.96■■■□□ 2.87
Lcmt1A0A0U1RNF2 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC32.87■■■□□ 2.85
Lcmt1A0A0U1RNF2 AC153911.1-202ENSMUST00000218534 1034 ntBASIC32.81■■■□□ 2.84
Lcmt1A0A0U1RNF2 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC32.67■■■□□ 2.82
Lcmt1A0A0U1RNF2 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
Lcmt1A0A0U1RNF2 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC32.55■■■□□ 2.8
Lcmt1A0A0U1RNF2 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC32.39■■■□□ 2.78
Lcmt1A0A0U1RNF2 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC32.39■■■□□ 2.78
Lcmt1A0A0U1RNF2 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
Lcmt1A0A0U1RNF2 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC32.26■■■□□ 2.75
Lcmt1A0A0U1RNF2 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
Lcmt1A0A0U1RNF2 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
Lcmt1A0A0U1RNF2 Gm10524-201ENSMUST00000181931 1893 ntBASIC32.08■■■□□ 2.73
Lcmt1A0A0U1RNF2 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC32■■■□□ 2.71
Lcmt1A0A0U1RNF2 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC31.99■■■□□ 2.71
Lcmt1A0A0U1RNF2 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
Lcmt1A0A0U1RNF2 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC31.91■■■□□ 2.7
Lcmt1A0A0U1RNF2 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
Lcmt1A0A0U1RNF2 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
Lcmt1A0A0U1RNF2 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
Lcmt1A0A0U1RNF2 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
Lcmt1A0A0U1RNF2 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
Lcmt1A0A0U1RNF2 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.66
Lcmt1A0A0U1RNF2 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
Lcmt1A0A0U1RNF2 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
Lcmt1A0A0U1RNF2 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC31.64■■■□□ 2.66
Lcmt1A0A0U1RNF2 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC31.62■■■□□ 2.65
Lcmt1A0A0U1RNF2 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
Lcmt1A0A0U1RNF2 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC31.57■■■□□ 2.64
Lcmt1A0A0U1RNF2 Gm25238-201ENSMUST00000174914 89 ntBASIC31.56■■■□□ 2.64
Lcmt1A0A0U1RNF2 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC31.52■■■□□ 2.64
Lcmt1A0A0U1RNF2 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
Lcmt1A0A0U1RNF2 Gm27325-201ENSMUST00000175467 74 ntBASIC31.48■■■□□ 2.63
Lcmt1A0A0U1RNF2 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC31.43■■■□□ 2.62
Lcmt1A0A0U1RNF2 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC31.42■■■□□ 2.62
Lcmt1A0A0U1RNF2 CT025624.2-201ENSMUST00000223609 1909 ntBASIC31.41■■■□□ 2.62
Lcmt1A0A0U1RNF2 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
Lcmt1A0A0U1RNF2 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC31.38■■■□□ 2.61
Lcmt1A0A0U1RNF2 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
Lcmt1A0A0U1RNF2 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC31.37■■■□□ 2.61
Lcmt1A0A0U1RNF2 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC31.33■■■□□ 2.61
Lcmt1A0A0U1RNF2 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC31.27■■■□□ 2.6
Lcmt1A0A0U1RNF2 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC31.23■■■□□ 2.59
Lcmt1A0A0U1RNF2 Gm42596-201ENSMUST00000196305 1958 ntBASIC31.21■■■□□ 2.59
Lcmt1A0A0U1RNF2 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
Lcmt1A0A0U1RNF2 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC31.15■■■□□ 2.58
Lcmt1A0A0U1RNF2 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
Lcmt1A0A0U1RNF2 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
Lcmt1A0A0U1RNF2 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC30.99■■■□□ 2.55
Lcmt1A0A0U1RNF2 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC30.88■■■□□ 2.53
Lcmt1A0A0U1RNF2 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
Lcmt1A0A0U1RNF2 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
Lcmt1A0A0U1RNF2 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC30.85■■■□□ 2.53
Lcmt1A0A0U1RNF2 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
Lcmt1A0A0U1RNF2 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
Lcmt1A0A0U1RNF2 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
Lcmt1A0A0U1RNF2 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
Lcmt1A0A0U1RNF2 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC30.77■■■□□ 2.52
Lcmt1A0A0U1RNF2 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
Lcmt1A0A0U1RNF2 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
Lcmt1A0A0U1RNF2 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
Lcmt1A0A0U1RNF2 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
Lcmt1A0A0U1RNF2 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
Lcmt1A0A0U1RNF2 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC30.56■■■□□ 2.48
Lcmt1A0A0U1RNF2 Rab21-202ENSMUST00000218831 843 ntBASIC30.56■■■□□ 2.48
Lcmt1A0A0U1RNF2 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC30.55■■■□□ 2.48
Lcmt1A0A0U1RNF2 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC30.55■■■□□ 2.48
Retrieved 100 of 76,532 protein–RNA pairs in 65.9 ms