RNA–Protein interactions for RNA: YPR189W

SKI3, Transcript of Ski complex component and TPR protein, yeastyeast

Gene SKI3, Length 4,299 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SKI3YPR189W TRL1P09880 827 aaKnown RBP2.16□□□□□ -2.06
SKI3YPR189W RPT1P33299 467 aaKnown RBP2.16□□□□□ -2.06
SKI3YPR189W NUG1P40010 520 aaKnown RBP2.16□□□□□ -2.06
SKI3YPR189W TFG1P41895 735 aaPredicted RBP2.16□□□□□ -2.06
SKI3YPR189W ACF4P47129 309 aa2.16□□□□□ -2.06
SKI3YPR189W KXD1P53158 218 aa2.16□□□□□ -2.06
SKI3YPR189W MPC54Q08550 464 aa2.16□□□□□ -2.06
SKI3YPR189W MSB4Q12317 492 aa2.16□□□□□ -2.06
SKI3YPR189W MID1P41821 548 aa2.16□□□□□ -2.06
SKI3YPR189W FIG4P42837 879 aa2.16□□□□□ -2.06
SKI3YPR189W FRA1Q07825 749 aa2.16□□□□□ -2.06
SKI3YPR189W FRT1Q99332 602 aa2.16□□□□□ -2.06
SKI3YPR189W NST1P53935 1240 aa2.15□□□□□ -2.06
SKI3YPR189W SPR28Q04921 423 aa2.15□□□□□ -2.06
SKI3YPR189W BDS1Q08347 646 aa2.15□□□□□ -2.06
SKI3YPR189W STB3Q12427 513 aa2.15□□□□□ -2.06
SKI3YPR189W BNR1P40450 1375 aa2.15□□□□□ -2.06
SKI3YPR189W TUB4P53378 473 aa2.15□□□□□ -2.07
SKI3YPR189W UBP3Q01477 912 aaKnown RBP RIP-Chip data2.15□□□□□ -2.07not detected
SKI3YPR189W PML39Q03760 334 aa2.15□□□□□ -2.07
SKI3YPR189W POB3Q04636 552 aaKnown RBP2.15□□□□□ -2.07
SKI3YPR189W YGR161W-CQ3E744 92 aa2.15□□□□□ -2.07
SKI3YPR189W ISC10P32645 267 aa2.15□□□□□ -2.07
SKI3YPR189W PTC4P38089 393 aa2.15□□□□□ -2.07
SKI3YPR189W MNL2Q12205 849 aa2.15□□□□□ -2.07
SKI3YPR189W CAT8P39113 1433 aa2.15□□□□□ -2.07
SKI3YPR189W PAT1P25644 796 aaKnown RBP2.14□□□□□ -2.07
SKI3YPR189W EAP1P36041 632 aaKnown RBP2.14□□□□□ -2.07
SKI3YPR189W AIM9P40053 627 aaKnown RBP2.14□□□□□ -2.07
SKI3YPR189W RPA14P50106 137 aa2.14□□□□□ -2.07
SKI3YPR189W SUT1P53032 299 aaKnown RBP2.14□□□□□ -2.07
SKI3YPR189W ISR1Q06098 443 aaKnown RBP2.14□□□□□ -2.07
SKI3YPR189W CBC2Q08920 208 aaKnown RBP RIP-Chip data2.14□□□□□ -2.07not detected
SKI3YPR189W OXR1Q08952 273 aa2.14□□□□□ -2.07
SKI3YPR189W RAM1P22007 431 aa2.14□□□□□ -2.07
SKI3YPR189W GCD6P32501 712 aaKnown RBP2.14□□□□□ -2.07
SKI3YPR189W NMA111P53920 997 aa2.14□□□□□ -2.07
SKI3YPR189W MAG2Q06436 670 aaKnown RBP2.14□□□□□ -2.07
SKI3YPR189W CYT1P07143 309 aa2.14□□□□□ -2.07
SKI3YPR189W TBS1P38114 1094 aa2.14□□□□□ -2.07
SKI3YPR189W RPS26AP39938 119 aaKnown RBP2.14□□□□□ -2.07
SKI3YPR189W RPS26BP39939 119 aaKnown RBP2.14□□□□□ -2.07
SKI3YPR189W YJR107WP47145 328 aa2.14□□□□□ -2.07
SKI3YPR189W ALG12P53730 551 aa2.14□□□□□ -2.07
SKI3YPR189W JIP4Q03361 876 aa2.14□□□□□ -2.07
SKI3YPR189W ESF1Q06344 628 aaKnown RBP2.14□□□□□ -2.07
SKI3YPR189W STI1P15705 589 aaKnown RBP RIP-Chip data2.14□□□□□ -2.07not detected
SKI3YPR189W MET4P32389 672 aa2.14□□□□□ -2.07
SKI3YPR189W SWE1P32944 819 aa2.14□□□□□ -2.07
SKI3YPR189W PET112P33893 541 aa2.14□□□□□ -2.07
SKI3YPR189W NTH2P35172 780 aa2.14□□□□□ -2.07
SKI3YPR189W TOM20P35180 183 aa2.14□□□□□ -2.07
SKI3YPR189W YHL008CP38750 627 aa2.14□□□□□ -2.07
SKI3YPR189W MAK10Q02197 733 aa2.14□□□□□ -2.07
SKI3YPR189W YPR097WQ06839 1073 aa2.14□□□□□ -2.07
SKI3YPR189W TRP5P00931 707 aaKnown RBP2.13□□□□□ -2.07
SKI3YPR189W DAT1P13483 248 aaKnown RBP2.13□□□□□ -2.07
SKI3YPR189W YJL049WP47048 450 aa2.13□□□□□ -2.07
SKI3YPR189W ISM1P48526 1002 aa2.13□□□□□ -2.07
SKI3YPR189W VPS72Q03388 795 aa2.13□□□□□ -2.07
SKI3YPR189W TRS120Q04183 1289 aa2.13□□□□□ -2.07
SKI3YPR189W RPB10P22139 70 aa2.13□□□□□ -2.07
SKI3YPR189W UBP1P25037 809 aa2.13□□□□□ -2.07
SKI3YPR189W VPS16Q03308 798 aa2.13□□□□□ -2.07
SKI3YPR189W UTP13Q05946 817 aaKnown RBP2.13□□□□□ -2.07
SKI3YPR189W MET6P05694 767 aaKnown RBP2.13□□□□□ -2.07
SKI3YPR189W CIT2P08679 460 aa2.13□□□□□ -2.07
SKI3YPR189W PDR1P12383 1068 aa2.13□□□□□ -2.07
SKI3YPR189W PRE9P23638 258 aaKnown RBP2.13□□□□□ -2.07
SKI3YPR189W CIC1P38779 376 aaKnown RBP2.13□□□□□ -2.07
SKI3YPR189W TIM54P47045 478 aa2.13□□□□□ -2.07
SKI3YPR189W UBX5Q06682 500 aa2.13□□□□□ -2.07
SKI3YPR189W MNN1P39106 762 aa2.12□□□□□ -2.07
SKI3YPR189W ULI1P43604 169 aa2.12□□□□□ -2.07
SKI3YPR189W UFD2P54860 961 aa2.12□□□□□ -2.07
SKI3YPR189W NSE3Q05541 303 aa2.12□□□□□ -2.07
SKI3YPR189W HDA3Q06623 655 aa2.12□□□□□ -2.07
SKI3YPR189W LSO1Q3E827 93 aa2.12□□□□□ -2.07
SKI3YPR189W RPS6AP0CX37 236 aaKnown RBP2.12□□□□□ -2.07
SKI3YPR189W RPS6BP0CX38 236 aaPredicted RBP2.12□□□□□ -2.07
SKI3YPR189W PRI2P20457 528 aa2.12□□□□□ -2.07
SKI3YPR189W KIP2P28743 706 aa2.12□□□□□ -2.07
SKI3YPR189W RRN7P40992 514 aa2.12□□□□□ -2.07
SKI3YPR189W RMD1Q03441 430 aa2.12□□□□□ -2.07
SKI3YPR189W TDA5Q06417 326 aaKnown RBP2.12□□□□□ -2.07
SKI3YPR189W ATG20Q07528 640 aa2.12□□□□□ -2.07
SKI3YPR189W UTR2P32623 467 aa2.12□□□□□ -2.07
SKI3YPR189W GRX7P38068 203 aa2.12□□□□□ -2.07
SKI3YPR189W RTT106P40161 455 aa2.12□□□□□ -2.07
SKI3YPR189W YRB30P53107 440 aaPredicted RBP2.12□□□□□ -2.07
SKI3YPR189W YLL066CQ99208 1374 aa2.12□□□□□ -2.07
SKI3YPR189W PBP2P38151 413 aaKnown RBP RIP-Chip data2.11□□□□□ -2.07not detected
SKI3YPR189W IOC3P43596 787 aa2.11□□□□□ -2.07
SKI3YPR189W IXR1P33417 597 aa2.11□□□□□ -2.07
SKI3YPR189W MSH4P40965 878 aaPredicted RBP2.11□□□□□ -2.07
SKI3YPR189W SAM37P50110 327 aa2.11□□□□□ -2.07
SKI3YPR189W GDE1Q02979 1223 aa2.11□□□□□ -2.07
SKI3YPR189W NOC3Q07896 663 aaPredicted RBP2.11□□□□□ -2.07
SKI3YPR189W PDC1P06169 563 aaKnown RBP2.11□□□□□ -2.07
SKI3YPR189W SSB1P11484 613 aaKnown RBP2.11□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 34.1 ms