RNA–Protein interactions for RNA: YPR001W

CIT3, Transcript of Dual specificity mitochondrial citrate and methylcitrate synthase, yeastyeast

Gene CIT3, Length 1,461 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CIT3YPR001W COG4Q06096 861 aa8.13□□□□□ -1.11
CIT3YPR001W HXK1P04806 485 aaKnown RBP8.12□□□□□ -1.11
CIT3YPR001W CYT1P07143 309 aa8.12□□□□□ -1.11
CIT3YPR001W MFT1P33441 392 aaKnown RBP8.12□□□□□ -1.11
CIT3YPR001W YHL008CP38750 627 aa8.12□□□□□ -1.11
CIT3YPR001W YEL023CP39992 682 aa8.12□□□□□ -1.11
CIT3YPR001W TYW3P53177 273 aa8.12□□□□□ -1.11
CIT3YPR001W YPR097WQ06839 1073 aa8.12□□□□□ -1.11
CIT3YPR001W OPI10Q08202 246 aa8.12□□□□□ -1.11
CIT3YPR001W CDC34P14682 295 aa8.11□□□□□ -1.11
CIT3YPR001W NUD1P32336 851 aa8.11□□□□□ -1.11
CIT3YPR001W TOS4Q06266 489 aa8.11□□□□□ -1.11
CIT3YPR001W ALR1Q08269 859 aa8.11□□□□□ -1.11
CIT3YPR001W FLC1Q08967 793 aa8.11□□□□□ -1.11
CIT3YPR001W ADR1P07248 1323 aa8.1□□□□□ -1.11
CIT3YPR001W FAA3P39002 694 aa8.1□□□□□ -1.11
CIT3YPR001W GTT3P39996 337 aa8.1□□□□□ -1.11
CIT3YPR001W RPT2P40327 437 aaKnown RBP8.1□□□□□ -1.11
CIT3YPR001W SET4P42948 560 aa8.1□□□□□ -1.11
CIT3YPR001W NAB6Q03735 1134 aaKnown RBP RIP-Chip data8.1□□□□□ -1.11not detected
CIT3YPR001W SPO20Q04359 397 aa8.1□□□□□ -1.11
CIT3YPR001W DPL1Q05567 589 aa8.1□□□□□ -1.11
CIT3YPR001W ISR1Q06098 443 aaKnown RBP8.1□□□□□ -1.11
CIT3YPR001W HDA3Q06623 655 aa8.1□□□□□ -1.11
CIT3YPR001W NOC3Q07896 663 aaPredicted RBP8.1□□□□□ -1.11
CIT3YPR001W RSP5P39940 809 aaKnown RBP8.09□□□□□ -1.11
CIT3YPR001W YOR378WQ08902 515 aa8.09□□□□□ -1.11
CIT3YPR001W IXR1P33417 597 aa8.08□□□□□ -1.12
CIT3YPR001W POL5P39985 1022 aaKnown RBP8.08□□□□□ -1.12
CIT3YPR001W MRPS18P42847 217 aa8.08□□□□□ -1.12
CIT3YPR001W YGR053CP53234 283 aa8.08□□□□□ -1.12
CIT3YPR001W CAB1Q04430 367 aa8.08□□□□□ -1.12
CIT3YPR001W ERR1P0CX10 437 aa8.07□□□□□ -1.12
CIT3YPR001W ERR2P0CX11 437 aa8.07□□□□□ -1.12
CIT3YPR001W SVL3Q03088 825 aaKnown RBP8.07□□□□□ -1.12
CIT3YPR001W AGE1Q04412 482 aa8.07□□□□□ -1.12
CIT3YPR001W SLX4Q12098 748 aa8.07□□□□□ -1.12
CIT3YPR001W MCD1Q12158 566 aa8.07□□□□□ -1.12
CIT3YPR001W SNF7P39929 240 aaKnown RBP8.06□□□□□ -1.12
CIT3YPR001W SUT1P53032 299 aaKnown RBP8.06□□□□□ -1.12
CIT3YPR001W ATG16Q03818 150 aa8.06□□□□□ -1.12
CIT3YPR001W DPS1P04802 557 aaKnown RBP8.06□□□□□ -1.12
CIT3YPR001W RPS6AP0CX37 236 aaKnown RBP8.06□□□□□ -1.12
CIT3YPR001W RPS6BP0CX38 236 aaPredicted RBP8.06□□□□□ -1.12
CIT3YPR001W PRE9P23638 258 aaKnown RBP8.06□□□□□ -1.12
CIT3YPR001W SFP1P32432 683 aa8.06□□□□□ -1.12
CIT3YPR001W NPL4P33755 580 aa8.06□□□□□ -1.12
CIT3YPR001W YKL069WP36088 180 aa8.06□□□□□ -1.12
CIT3YPR001W YGR125WP53273 1036 aa8.06□□□□□ -1.12
CIT3YPR001W ESF2P53743 316 aaKnown RBP8.06□□□□□ -1.12
CIT3YPR001W ENT2Q05785 613 aa8.06□□□□□ -1.12
CIT3YPR001W RPL8AP17076 256 aaKnown RBP8.05□□□□□ -1.12
CIT3YPR001W RPN12P32496 274 aa8.05□□□□□ -1.12
CIT3YPR001W TOA1P32773 286 aa8.05□□□□□ -1.12
CIT3YPR001W KTR2P33550 425 aa8.05□□□□□ -1.12
CIT3YPR001W ISW1P38144 1129 aa8.05□□□□□ -1.12
CIT3YPR001W GGA2P38817 585 aaKnown RBP8.05□□□□□ -1.12
CIT3YPR001W STR2P47164 639 aa8.05□□□□□ -1.12
CIT3YPR001W ISU2Q12056 156 aa8.05□□□□□ -1.12
CIT3YPR001W TMA7Q3E764 64 aaKnown RBP8.05□□□□□ -1.12
CIT3YPR001W CCP1P00431 361 aa8.04□□□□□ -1.12
CIT3YPR001W CDC11P32458 415 aa8.04□□□□□ -1.12
CIT3YPR001W YGR021WP53212 290 aa8.04□□□□□ -1.12
CIT3YPR001W BSC2Q05611 235 aa8.04□□□□□ -1.12
CIT3YPR001W NTG2Q08214 380 aa8.04□□□□□ -1.12
CIT3YPR001W FAL1Q12099 399 aaKnown RBP8.04□□□□□ -1.12
CIT3YPR001W TMA17Q12513 150 aa8.04□□□□□ -1.12
CIT3YPR001W DUT1P33317 147 aa8.03□□□□□ -1.12
CIT3YPR001W TGL3P40308 642 aa8.03□□□□□ -1.12
CIT3YPR001W DAS1P47005 663 aa8.03□□□□□ -1.12
CIT3YPR001W SPO75Q07798 868 aa8.03□□□□□ -1.12
CIT3YPR001W OSH2Q12451 1283 aa8.03□□□□□ -1.12
CIT3YPR001W MSH2P25847 964 aa8.02□□□□□ -1.13
CIT3YPR001W SMC1P32908 1225 aa8.02□□□□□ -1.13
CIT3YPR001W PTC4P38089 393 aa8.02□□□□□ -1.13
CIT3YPR001W IES1P43579 692 aa8.02□□□□□ -1.13
CIT3YPR001W YJR115WP47152 169 aa8.02□□□□□ -1.13
CIT3YPR001W DAL4Q04895 635 aa8.02□□□□□ -1.13
CIT3YPR001W MPC54Q08550 464 aa8.02□□□□□ -1.13
CIT3YPR001W ATP4P05626 244 aa8.01□□□□□ -1.13
CIT3YPR001W SWI5P08153 709 aa8.01□□□□□ -1.13
CIT3YPR001W RAM1P22007 431 aa8.01□□□□□ -1.13
CIT3YPR001W RSC4Q02206 625 aa8.01□□□□□ -1.13
CIT3YPR001W MTC5Q03897 1148 aa8.01□□□□□ -1.13
CIT3YPR001W NYV1Q12255 253 aa8.01□□□□□ -1.13
CIT3YPR001W PDC1P06169 563 aaKnown RBP8□□□□□ -1.13
CIT3YPR001W KIP2P28743 706 aa8□□□□□ -1.13
CIT3YPR001W YGR237CP50089 785 aa8□□□□□ -1.13
CIT3YPR001W MSB4Q12317 492 aa8□□□□□ -1.13
CIT3YPR001W CAN1P04817 590 aa8□□□□□ -1.13
CIT3YPR001W VAC17P25591 423 aa8□□□□□ -1.13
CIT3YPR001W KRI1P42846 591 aaKnown RBP8□□□□□ -1.13
CIT3YPR001W HSP60P19882 572 aaKnown RBP7.99□□□□□ -1.13
CIT3YPR001W YBR184WP38299 523 aa7.99□□□□□ -1.13
CIT3YPR001W NIT1P40447 199 aa7.99□□□□□ -1.13
CIT3YPR001W HLJ1P48353 224 aa7.99□□□□□ -1.13
CIT3YPR001W ATG13Q06628 738 aa7.99□□□□□ -1.13
CIT3YPR001W ATG20Q07528 640 aa7.99□□□□□ -1.13
CIT3YPR001W CIT1P00890 479 aa7.98□□□□□ -1.13
CIT3YPR001W BAS1P22035 811 aa7.98□□□□□ -1.13
Retrieved 100 of 5,963 RNA–protein pairs in 15.7 ms