RNA–Protein interactions for RNA: YPL116W

HOS3, Transcript of Trichostatin A-insensitive homodimeric histone deacetylase (HDAC), yeast

Gene HOS3, Length 2,094 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HOS3	YPL116W	RTC4	P53850	401 aa		4.55	□□□□□ -1.68
HOS3	YPL116W	SVL3	Q03088	825 aa	Known RBP	4.55	□□□□□ -1.68
HOS3	YPL116W	IRC3	Q06683	689 aa		4.55	□□□□□ -1.68
HOS3	YPL116W	MAM3	Q12296	706 aa		4.55	□□□□□ -1.68
HOS3	YPL116W	RTC1	Q08281	1341 aa		4.55	□□□□□ -1.68
HOS3	YPL116W	ECM5	Q03214	1411 aa		4.55	□□□□□ -1.68
HOS3	YPL116W	PET494	P07390	489 aa	Predicted RBP	4.55	□□□□□ -1.68
HOS3	YPL116W	SEC15	P22224	910 aa		4.55	□□□□□ -1.68
HOS3	YPL116W	MRPL25	P23369	157 aa		4.55	□□□□□ -1.68
HOS3	YPL116W	PSE1	P32337	1089 aa	Known RBP	4.55	□□□□□ -1.68
HOS3	YPL116W	RKM3	P38222	552 aa		4.55	□□□□□ -1.68
HOS3	YPL116W	YTA6	P40328	754 aa		4.55	□□□□□ -1.68
HOS3	YPL116W	UTP18	P40362	594 aa	Predicted RBP	4.55	□□□□□ -1.68
HOS3	YPL116W	INP52	P50942	1183 aa		4.55	□□□□□ -1.68
HOS3	YPL116W	IST1	P53843	298 aa	Predicted RBP	4.55	□□□□□ -1.68
HOS3	YPL116W	VPS60	Q03390	229 aa		4.55	□□□□□ -1.68
HOS3	YPL116W	ITT1	Q04638	464 aa		4.55	□□□□□ -1.68
HOS3	YPL116W	NSE3	Q05541	303 aa		4.55	□□□□□ -1.68
HOS3	YPL116W	CSR1	Q06705	408 aa	Known RBP	4.55	□□□□□ -1.68
HOS3	YPL116W	YRM1	Q12340	786 aa		4.55	□□□□□ -1.68
HOS3	YPL116W	YOL087C	Q99247	1116 aa		4.55	□□□□□ -1.68
HOS3	YPL116W	RAD50	P12753	1312 aa		4.55	□□□□□ -1.68
HOS3	YPL116W	MYO4	P32492	1471 aa		4.55	□□□□□ -1.68
HOS3	YPL116W	EDE1	P34216	1381 aa		4.54	□□□□□ -1.68
HOS3	YPL116W	NAT1	P12945	854 aa	Known RBP	4.54	□□□□□ -1.68
HOS3	YPL116W	PET123	P17558	318 aa		4.54	□□□□□ -1.68
HOS3	YPL116W	DPH5	P32469	300 aa	Predicted RBP	4.54	□□□□□ -1.68
HOS3	YPL116W	ABZ1	P37254	787 aa	Predicted RBP	4.54	□□□□□ -1.68
HOS3	YPL116W	OTU2	P38747	307 aa	Known RBP	4.54	□□□□□ -1.68
HOS3	YPL116W	SWD1	P39706	426 aa		4.54	□□□□□ -1.68
HOS3	YPL116W	ENP2	P48234	707 aa	Known RBP	4.54	□□□□□ -1.68
HOS3	YPL116W	ERB1	Q04660	807 aa	Known RBP	4.54	□□□□□ -1.68
HOS3	YPL116W	YPR097W	Q06839	1073 aa		4.54	□□□□□ -1.68
HOS3	YPL116W	YDL073W	Q07454	984 aa		4.54	□□□□□ -1.68
HOS3	YPL116W	KEX1	P09620	729 aa		4.53	□□□□□ -1.68
HOS3	YPL116W	HNM1	P19807	563 aa		4.53	□□□□□ -1.68
HOS3	YPL116W	ANP1	P32629	500 aa		4.53	□□□□□ -1.68
HOS3	YPL116W	CST6	P40535	587 aa		4.53	□□□□□ -1.68
HOS3	YPL116W	IRR1	P40541	1150 aa		4.53	□□□□□ -1.68
HOS3	YPL116W	YRB1	P41920	201 aa	Known RBP	4.53	□□□□□ -1.68
HOS3	YPL116W	KIN1	P13185	1064 aa		4.53	□□□□□ -1.68
HOS3	YPL116W	CDC3	P32457	520 aa	Known RBP	4.53	□□□□□ -1.68
HOS3	YPL116W	SSZ1	P38788	538 aa	Known RBP	4.53	□□□□□ -1.68
HOS3	YPL116W	MXR1	P40029	184 aa		4.53	□□□□□ -1.68
HOS3	YPL116W	MET18	P40469	1032 aa		4.53	□□□□□ -1.68
HOS3	YPL116W	HOP2	P53187	214 aa		4.53	□□□□□ -1.68
HOS3	YPL116W	RNH70	P53331	553 aa		4.53	□□□□□ -1.68
HOS3	YPL116W	RNH1	Q04740	348 aa		4.53	□□□□□ -1.68
HOS3	YPL116W	SPP382	Q06411	708 aa	Predicted RBP	4.53	□□□□□ -1.68
HOS3	YPL116W	ISA1	Q07821	250 aa	Predicted RBP	4.53	□□□□□ -1.68
HOS3	YPL116W	THO2	P53552	1597 aa	Known RBP	4.53	□□□□□ -1.68
HOS3	YPL116W	HSL1	P34244	1518 aa		4.53	□□□□□ -1.68
HOS3	YPL116W	LEU1	P07264	779 aa	Known RBP	4.52	□□□□□ -1.69
HOS3	YPL116W	SSB1	P11484	613 aa	Known RBP	4.52	□□□□□ -1.69
HOS3	YPL116W	PKC1	P24583	1151 aa		4.52	□□□□□ -1.69
HOS3	YPL116W	RXT2	P38255	430 aa		4.52	□□□□□ -1.69
HOS3	YPL116W	RTT105	P40063	208 aa		4.52	□□□□□ -1.69
HOS3	YPL116W	FTR1	P40088	404 aa		4.52	□□□□□ -1.69
HOS3	YPL116W	SSB2	P40150	613 aa	Known RBP	4.52	□□□□□ -1.69
HOS3	YPL116W	LAM5	P43560	674 aa		4.52	□□□□□ -1.69
HOS3	YPL116W	IOC3	P43596	787 aa		4.52	□□□□□ -1.69
HOS3	YPL116W	YMR111C	Q04461	462 aa	Predicted RBP	4.52	□□□□□ -1.69
HOS3	YPL116W	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	4.52	□□□□□ -1.69	not detected
HOS3	YPL116W	YIL002W-A	Q3E7Z5	69 aa		4.52	□□□□□ -1.69
HOS3	YPL116W	SWC3	P31376	625 aa		4.52	□□□□□ -1.69
HOS3	YPL116W	YGL015C	P33199	130 aa		4.52	□□□□□ -1.69
HOS3	YPL116W	SLD2	P34252	453 aa		4.52	□□□□□ -1.69
HOS3	YPL116W	STN1	P38960	494 aa		4.52	□□□□□ -1.69
HOS3	YPL116W	RRP8	P38961	392 aa	Known RBP	4.52	□□□□□ -1.69
HOS3	YPL116W	RIC1	P40395	1056 aa		4.52	□□□□□ -1.69
HOS3	YPL116W	PXA1	P41909	870 aa		4.52	□□□□□ -1.69
HOS3	YPL116W	OYE2	Q03558	400 aa	Known RBP	4.52	□□□□□ -1.69
HOS3	YPL116W	ARO80	Q04052	950 aa		4.52	□□□□□ -1.69
HOS3	YPL116W	NOC3	Q07896	663 aa	Predicted RBP	4.52	□□□□□ -1.69
HOS3	YPL116W	SLK19	Q08581	821 aa	Known RBP	4.52	□□□□□ -1.69
HOS3	YPL116W	YOR352W	Q08816	343 aa		4.52	□□□□□ -1.69
HOS3	YPL116W	CIR2	Q08822	631 aa		4.52	□□□□□ -1.69
HOS3	YPL116W	SPT6	P23615	1451 aa	Known RBP	4.51	□□□□□ -1.69
HOS3	YPL116W	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	4.51	□□□□□ -1.69	not detected
HOS3	YPL116W	PAP1	P29468	568 aa	Known RBP	4.51	□□□□□ -1.69
HOS3	YPL116W	VPS29	P38759	282 aa		4.51	□□□□□ -1.69
HOS3	YPL116W	GGA2	P38817	585 aa	Known RBP	4.51	□□□□□ -1.69
HOS3	YPL116W	SPC72	P39723	622 aa		4.51	□□□□□ -1.69
HOS3	YPL116W	DAS1	P47005	663 aa		4.51	□□□□□ -1.69
HOS3	YPL116W	MTC5	Q03897	1148 aa		4.51	□□□□□ -1.69
HOS3	YPL116W	RRN11	Q04712	507 aa		4.51	□□□□□ -1.69
HOS3	YPL116W	DBP9	Q06218	594 aa	Known RBP	4.51	□□□□□ -1.69
HOS3	YPL116W	DNL4	Q08387	944 aa	Predicted RBP	4.51	□□□□□ -1.69
HOS3	YPL116W	RIO1	Q12196	484 aa	Known RBP	4.51	□□□□□ -1.69
HOS3	YPL116W	SEN2	P16658	377 aa		4.5	□□□□□ -1.69
HOS3	YPL116W	FUI1	P38196	639 aa		4.5	□□□□□ -1.69
HOS3	YPL116W	TMN3	P40071	706 aa		4.5	□□□□□ -1.69
HOS3	YPL116W	ALG2	P43636	503 aa		4.5	□□□□□ -1.69
HOS3	YPL116W	SXM1	Q04175	944 aa	Known RBP	4.5	□□□□□ -1.69
HOS3	YPL116W	FUS2	Q05670	677 aa		4.5	□□□□□ -1.69
HOS3	YPL116W	GRC3	Q07845	632 aa		4.5	□□□□□ -1.69
HOS3	YPL116W	YBL111C	Q3E7Y5	667 aa		4.5	□□□□□ -1.69
HOS3	YPL116W	SWI1	P09547	1314 aa		4.5	□□□□□ -1.69
HOS3	YPL116W	HEM1	P09950	548 aa	Predicted RBP	4.5	□□□□□ -1.69
HOS3	YPL116W	HOM3	P10869	527 aa		4.5	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 9.4 ms