RNA–Protein interactions for RNA: YOR224C

RPB8, Transcript of RNA polymerase subunit ABC14.5, yeastyeast

Gene RPB8, Length 441 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPB8YOR224C FIR1P40020 876 aa6.76□□□□□ -1.33
RPB8YOR224C SPR3P41901 512 aa6.76□□□□□ -1.33
RPB8YOR224C BOL3P39724 118 aa6.75□□□□□ -1.33
RPB8YOR224C CUS1Q02554 436 aaPredicted RBP6.75□□□□□ -1.33
RPB8YOR224C NCL1P38205 684 aaKnown RBP6.74□□□□□ -1.33
RPB8YOR224C SYT1Q06836 1226 aa6.74□□□□□ -1.33
RPB8YOR224C DPH6Q12429 685 aa6.74□□□□□ -1.33
RPB8YOR224C YDR461C-AQ2V2P7 80 aa6.73□□□□□ -1.33
RPB8YOR224C TRK2P28584 889 aa6.72□□□□□ -1.33
RPB8YOR224C APM2P38700 605 aa6.72□□□□□ -1.33
RPB8YOR224C QDR1P40475 563 aa6.72□□□□□ -1.33
RPB8YOR224C HXT8P40886 569 aa6.72□□□□□ -1.33
RPB8YOR224C GRS1P38088 690 aaKnown RBP6.71□□□□□ -1.34
RPB8YOR224C GIP1P38229 639 aa6.71□□□□□ -1.34
RPB8YOR224C YBR287WP38355 427 aa6.71□□□□□ -1.34
RPB8YOR224C LSO1Q3E827 93 aa6.71□□□□□ -1.34
RPB8YOR224C YBL113CQ7M4S9 792 aa6.71□□□□□ -1.34
RPB8YOR224C RPC31P17890 251 aa6.7□□□□□ -1.34
RPB8YOR224C BOI1P38041 980 aaKnown RBP6.7□□□□□ -1.34
RPB8YOR224C ISW1P38144 1129 aa6.7□□□□□ -1.34
RPB8YOR224C BSD2P38356 321 aa6.7□□□□□ -1.34
RPB8YOR224C RPB10P22139 70 aa6.69□□□□□ -1.34
RPB8YOR224C YOR296WQ08748 1289 aa6.69□□□□□ -1.34
RPB8YOR224C MSN1P22148 382 aa6.68□□□□□ -1.34
RPB8YOR224C JJJ3P47138 172 aa6.68□□□□□ -1.34
RPB8YOR224C SKP1P52286 194 aa6.68□□□□□ -1.34
RPB8YOR224C HEH2Q03281 663 aa6.68□□□□□ -1.34
RPB8YOR224C ERP5P38819 212 aa6.67□□□□□ -1.34
RPB8YOR224C ATG1P53104 897 aa6.67□□□□□ -1.34
RPB8YOR224C YNR040WP53736 256 aa6.67□□□□□ -1.34
RPB8YOR224C SMC1P32908 1225 aa6.66□□□□□ -1.34
RPB8YOR224C TY1A-DR2Q03964 440 aaKnown RBP6.66□□□□□ -1.34
RPB8YOR224C NAB2P32505 525 aaKnown RBP RIP-Chip data6.65□□□□□ -1.34not detected
RPB8YOR224C RAD55P38953 406 aa6.65□□□□□ -1.34
RPB8YOR224C APC11Q12157 165 aa6.65□□□□□ -1.34
RPB8YOR224C ACF4P47129 309 aa6.64□□□□□ -1.35
RPB8YOR224C ITC1P53125 1264 aa6.64□□□□□ -1.35
RPB8YOR224C MSC7P38694 644 aa6.63□□□□□ -1.35
RPB8YOR224C AIM46P38885 310 aa6.63□□□□□ -1.35
RPB8YOR224C THI72Q08579 599 aa6.63□□□□□ -1.35
RPB8YOR224C GPM1P00950 247 aaKnown RBP6.62□□□□□ -1.35
RPB8YOR224C YJL181WP46987 611 aa6.62□□□□□ -1.35
RPB8YOR224C YNR014WP53719 212 aa6.62□□□□□ -1.35
RPB8YOR224C UFD2P54860 961 aa6.62□□□□□ -1.35
RPB8YOR224C AI1P03875 834 aa6.61□□□□□ -1.35
RPB8YOR224C TRL1P09880 827 aaKnown RBP6.61□□□□□ -1.35
RPB8YOR224C PDC5P16467 563 aaKnown RBP6.6□□□□□ -1.35
RPB8YOR224C SSF1P38789 453 aaPredicted RBP6.6□□□□□ -1.35
RPB8YOR224C NTA1P40354 457 aa6.6□□□□□ -1.35
RPB8YOR224C YIL165CP40446 119 aa6.6□□□□□ -1.35
RPB8YOR224C RGD2P43556 714 aa6.6□□□□□ -1.35
RPB8YOR224C RSC2Q06488 889 aa6.6□□□□□ -1.35
RPB8YOR224C KNS1P32350 737 aaPredicted RBP6.59□□□□□ -1.35
RPB8YOR224C IRS4P36115 615 aaKnown RBP6.59□□□□□ -1.35
RPB8YOR224C PRK1P40494 810 aa6.59□□□□□ -1.35
RPB8YOR224C MDJ2P42834 146 aa6.59□□□□□ -1.35
RPB8YOR224C THI12P42883 340 aa6.59□□□□□ -1.35
RPB8YOR224C THI5P43534 340 aa6.59□□□□□ -1.35
RPB8YOR224C THI11P47183 340 aa6.59□□□□□ -1.35
RPB8YOR224C NSG2P53898 299 aa6.59□□□□□ -1.35
RPB8YOR224C TRS120Q04183 1289 aa6.59□□□□□ -1.35
RPB8YOR224C EMG1Q06287 252 aaKnown RBP6.59□□□□□ -1.35
RPB8YOR224C THI13Q07748 340 aa6.59□□□□□ -1.35
RPB8YOR224C TIF6Q12522 245 aaKnown RBP6.59□□□□□ -1.35
RPB8YOR224C IDI1P15496 288 aa6.58□□□□□ -1.36
RPB8YOR224C KTR2P33550 425 aa6.58□□□□□ -1.36
RPB8YOR224C SLD2P34252 453 aa6.58□□□□□ -1.36
RPB8YOR224C MET1P36150 593 aa6.58□□□□□ -1.36
RPB8YOR224C ECM2P38241 364 aaKnown RBP6.58□□□□□ -1.36
RPB8YOR224C YHL050CP38721 697 aa6.58□□□□□ -1.36
RPB8YOR224C YHR219WP38900 624 aa6.58□□□□□ -1.36
RPB8YOR224C PSY2P40164 858 aa6.58□□□□□ -1.36
RPB8YOR224C PPT1P53043 513 aa6.58□□□□□ -1.36
RPB8YOR224C MDJ1P35191 511 aa6.57□□□□□ -1.36
RPB8YOR224C ALG14P38242 237 aa6.57□□□□□ -1.36
RPB8YOR224C STM1P39015 273 aaKnown RBP6.57□□□□□ -1.36
RPB8YOR224C BOI2P39969 1040 aa6.57□□□□□ -1.36
RPB8YOR224C YER156CP40093 338 aaKnown RBP6.56□□□□□ -1.36
RPB8YOR224C SBE2P42223 864 aaKnown RBP6.55□□□□□ -1.36
RPB8YOR224C YNL011CP53980 444 aa6.55□□□□□ -1.36
RPB8YOR224C YML020WQ03722 664 aa6.55□□□□□ -1.36
RPB8YOR224C NUT2Q06213 157 aa6.55□□□□□ -1.36
RPB8YOR224C PGM2P37012 569 aaKnown RBP6.54□□□□□ -1.36
RPB8YOR224C FRT1Q99332 602 aa6.54□□□□□ -1.36
RPB8YOR224C NHA1Q99271 985 aa6.53□□□□□ -1.36
RPB8YOR224C MRP10O75012 95 aa6.52□□□□□ -1.37
RPB8YOR224C BSC2Q05611 235 aa6.52□□□□□ -1.37
RPB8YOR224C YHL008CP38750 627 aa6.51□□□□□ -1.37
RPB8YOR224C INP51P40559 946 aaKnown RBP6.51□□□□□ -1.37
RPB8YOR224C MSC6Q08818 692 aaKnown RBP6.51□□□□□ -1.37
RPB8YOR224C SEC20P28791 383 aa6.5□□□□□ -1.37
RPB8YOR224C IPL1P38991 367 aa6.5□□□□□ -1.37
RPB8YOR224C ICP55P40051 511 aa6.5□□□□□ -1.37
RPB8YOR224C SOK2P53438 785 aaPredicted RBP6.5□□□□□ -1.37
RPB8YOR224C CDC55Q00362 526 aa6.5□□□□□ -1.37
RPB8YOR224C TDA6Q06466 467 aa6.5□□□□□ -1.37
RPB8YOR224C PUS1Q12211 544 aaKnown RBP6.5□□□□□ -1.37
RPB8YOR224C NAR1P23503 491 aaKnown RBP6.49□□□□□ -1.37
RPB8YOR224C RSC4Q02206 625 aa6.49□□□□□ -1.37
RPB8YOR224C GIS4Q04233 774 aa6.49□□□□□ -1.37
Retrieved 100 of 5,963 RNA–protein pairs in 9.5 ms