RNA–Protein interactions for RNA: YOR068C

VAM10, Transcript of Protein involved in vacuole morphogenesis, yeast

Gene VAM10, Length 345 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VAM10	YOR068C	KAP122	P32767	1081 aa		4.87	□□□□□ -1.63
VAM10	YOR068C	LDH1	P38139	375 aa		4.87	□□□□□ -1.63
VAM10	YOR068C	DYS1	P38791	387 aa		4.87	□□□□□ -1.63
VAM10	YOR068C	RGA1	P39083	1007 aa		4.87	□□□□□ -1.63
VAM10	YOR068C	HXT8	P40886	569 aa		4.87	□□□□□ -1.63
VAM10	YOR068C	MTO1	P53070	669 aa		4.87	□□□□□ -1.63
VAM10	YOR068C	GPI13	Q07830	1017 aa		4.87	□□□□□ -1.63
VAM10	YOR068C	MNL2	Q12205	849 aa		4.87	□□□□□ -1.63
VAM10	YOR068C	TY1A-BL	Q12266	440 aa		4.87	□□□□□ -1.63
VAM10	YOR068C	MSN1	P22148	382 aa		4.86	□□□□□ -1.63
VAM10	YOR068C	MET22	P32179	357 aa		4.86	□□□□□ -1.63
VAM10	YOR068C	BSD2	P38356	321 aa		4.86	□□□□□ -1.63
VAM10	YOR068C	OSH7	P38755	437 aa		4.86	□□□□□ -1.63
VAM10	YOR068C	SCW11	P53189	542 aa		4.86	□□□□□ -1.63
VAM10	YOR068C	UFD2	P54860	961 aa		4.86	□□□□□ -1.63
VAM10	YOR068C	LCB5	Q06147	687 aa	Known RBP	4.86	□□□□□ -1.63
VAM10	YOR068C	MET4	P32389	672 aa		4.85	□□□□□ -1.63
VAM10	YOR068C	NAB2	P32505	525 aa	Known RBP RIP-Chip data	4.85	□□□□□ -1.63	not detected
VAM10	YOR068C	THI12	P42883	340 aa		4.85	□□□□□ -1.63
VAM10	YOR068C	THI5	P43534	340 aa		4.85	□□□□□ -1.63
VAM10	YOR068C	THI11	P47183	340 aa		4.85	□□□□□ -1.63
VAM10	YOR068C	NAM8	Q00539	523 aa	Known RBP	4.85	□□□□□ -1.63
VAM10	YOR068C	THI13	Q07748	340 aa		4.85	□□□□□ -1.63
VAM10	YOR068C	RGP1	P16664	663 aa		4.84	□□□□□ -1.63
VAM10	YOR068C	RGD2	P43556	714 aa		4.84	□□□□□ -1.63
VAM10	YOR068C	SNU71	P53207	620 aa	Known RBP	4.84	□□□□□ -1.63
VAM10	YOR068C	CUS1	Q02554	436 aa	Predicted RBP	4.84	□□□□□ -1.63
VAM10	YOR068C	YDR444W	Q04093	687 aa		4.84	□□□□□ -1.63
VAM10	YOR068C	RRP15	Q06511	250 aa	Predicted RBP	4.84	□□□□□ -1.63
VAM10	YOR068C	YOR296W	Q08748	1289 aa		4.84	□□□□□ -1.63
VAM10	YOR068C	ATE1	P16639	503 aa		4.83	□□□□□ -1.64
VAM10	YOR068C	SMC1	P32908	1225 aa		4.83	□□□□□ -1.64
VAM10	YOR068C	RAD55	P38953	406 aa		4.83	□□□□□ -1.64
VAM10	YOR068C	SKP1	P52286	194 aa		4.83	□□□□□ -1.64
VAM10	YOR068C	STB3	Q12427	513 aa		4.83	□□□□□ -1.64
VAM10	YOR068C	NAP1	P25293	417 aa	Known RBP	4.82	□□□□□ -1.64
VAM10	YOR068C	MRPL16	P38064	232 aa		4.82	□□□□□ -1.64
VAM10	YOR068C	GIP1	P38229	639 aa		4.82	□□□□□ -1.64
VAM10	YOR068C	NTA1	P40354	457 aa		4.82	□□□□□ -1.64
VAM10	YOR068C	ROG3	P43602	733 aa		4.82	□□□□□ -1.64
VAM10	YOR068C	POL32	P47110	350 aa		4.82	□□□□□ -1.64
VAM10	YOR068C	TIF6	Q12522	245 aa	Known RBP	4.82	□□□□□ -1.64
VAM10	YOR068C	CCP1	P00431	361 aa		4.81	□□□□□ -1.64
VAM10	YOR068C	ISW1	P38144	1129 aa		4.81	□□□□□ -1.64
VAM10	YOR068C	ITC1	P53125	1264 aa		4.81	□□□□□ -1.64
VAM10	YOR068C	CDC55	Q00362	526 aa		4.81	□□□□□ -1.64
VAM10	YOR068C	TY1A-MR1	Q04215	440 aa		4.81	□□□□□ -1.64
VAM10	YOR068C	PHO4	P07270	312 aa	Known RBP	4.8	□□□□□ -1.64
VAM10	YOR068C	ASF1	P32447	279 aa		4.8	□□□□□ -1.64
VAM10	YOR068C	FIR1	P40020	876 aa		4.8	□□□□□ -1.64
VAM10	YOR068C	PSY2	P40164	858 aa		4.8	□□□□□ -1.64
VAM10	YOR068C	YNR040W	P53736	256 aa		4.8	□□□□□ -1.64
VAM10	YOR068C	YNL011C	P53980	444 aa		4.8	□□□□□ -1.64
VAM10	YOR068C	RSC4	Q02206	625 aa		4.8	□□□□□ -1.64
VAM10	YOR068C	IRS4	P36115	615 aa	Known RBP	4.79	□□□□□ -1.64
VAM10	YOR068C	YIR007W	P40566	764 aa		4.79	□□□□□ -1.64
VAM10	YOR068C	CUZ1	P53899	274 aa		4.79	□□□□□ -1.64
VAM10	YOR068C	EMG1	Q06287	252 aa	Known RBP	4.79	□□□□□ -1.64
VAM10	YOR068C	DIT1	P21623	536 aa		4.78	□□□□□ -1.64
VAM10	YOR068C	APM2	P38700	605 aa		4.78	□□□□□ -1.64
VAM10	YOR068C	ACO2	P39533	789 aa		4.78	□□□□□ -1.64
VAM10	YOR068C	AIM46	P38885	310 aa		4.77	□□□□□ -1.65
VAM10	YOR068C	YIL165C	P40446	119 aa		4.77	□□□□□ -1.65
VAM10	YOR068C	CAF120	P53836	1060 aa		4.77	□□□□□ -1.65
VAM10	YOR068C	YMR265C	Q03508	461 aa	Known RBP	4.77	□□□□□ -1.65
VAM10	YOR068C	BSC2	Q05611	235 aa		4.77	□□□□□ -1.65
VAM10	YOR068C	NCL1	P38205	684 aa	Known RBP	4.76	□□□□□ -1.65
VAM10	YOR068C	MSC7	P38694	644 aa		4.76	□□□□□ -1.65
VAM10	YOR068C	MET10	P39692	1035 aa		4.76	□□□□□ -1.65
VAM10	YOR068C	DAK2	P43550	591 aa		4.76	□□□□□ -1.65
VAM10	YOR068C	YJR107W	P47145	328 aa		4.76	□□□□□ -1.65
VAM10	YOR068C	YRB30	P53107	440 aa	Predicted RBP	4.76	□□□□□ -1.65
VAM10	YOR068C	YDL176W	Q12027	708 aa		4.76	□□□□□ -1.65
VAM10	YOR068C	IDI1	P15496	288 aa		4.75	□□□□□ -1.65
VAM10	YOR068C	GCD6	P32501	712 aa	Known RBP	4.75	□□□□□ -1.65
VAM10	YOR068C	RPT1	P33299	467 aa	Known RBP	4.75	□□□□□ -1.65
VAM10	YOR068C	YBR287W	P38355	427 aa		4.75	□□□□□ -1.65
VAM10	YOR068C	YER156C	P40093	338 aa	Known RBP	4.75	□□□□□ -1.65
VAM10	YOR068C	FYV10	P40492	516 aa		4.75	□□□□□ -1.65
VAM10	YOR068C	SAM37	P50110	327 aa		4.75	□□□□□ -1.65
VAM10	YOR068C	KRE33	P53914	1056 aa	Known RBP	4.75	□□□□□ -1.65
VAM10	YOR068C	CTR9	P89105	1077 aa		4.75	□□□□□ -1.65
VAM10	YOR068C	TOS4	Q06266	489 aa		4.75	□□□□□ -1.65
VAM10	YOR068C	NOC3	Q07896	663 aa	Predicted RBP	4.75	□□□□□ -1.65
VAM10	YOR068C	COB	P00163	385 aa		4.74	□□□□□ -1.65
VAM10	YOR068C	RPP1A	P05318	106 aa	Predicted RBP	4.74	□□□□□ -1.65
VAM10	YOR068C	GAR1	P28007	205 aa	Known RBP	4.74	□□□□□ -1.65
VAM10	YOR068C	SEC8	P32855	1065 aa		4.74	□□□□□ -1.65
VAM10	YOR068C	MGE1	P38523	228 aa		4.74	□□□□□ -1.65
VAM10	YOR068C	INP54	Q08227	384 aa	Known RBP	4.74	□□□□□ -1.65
VAM10	YOR068C	YDR461C-A	Q2V2P7	80 aa		4.74	□□□□□ -1.65
VAM10	YOR068C	FPS1	P23900	669 aa		4.73	□□□□□ -1.65
VAM10	YOR068C	PYC2	P32327	1180 aa	Known RBP	4.73	□□□□□ -1.65
VAM10	YOR068C	VPS35	P34110	944 aa		4.73	□□□□□ -1.65
VAM10	YOR068C	MET1	P36150	593 aa		4.73	□□□□□ -1.65
VAM10	YOR068C	PAM1	P37304	830 aa	Known RBP	4.73	□□□□□ -1.65
VAM10	YOR068C	YHL008C	P38750	627 aa		4.73	□□□□□ -1.65
VAM10	YOR068C	CIC1	P38779	376 aa	Known RBP	4.73	□□□□□ -1.65
VAM10	YOR068C	PPT1	P53043	513 aa		4.73	□□□□□ -1.65
VAM10	YOR068C	ADE12	P80210	433 aa	Known RBP	4.73	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 49.6 ms