RNA–Protein interactions for RNA: YMR128W

ECM16, Transcript of Essential DEAH-box ATP-dependent RNA helicase specific to U3 snoRNP, yeastyeast

Gene ECM16, Length 3,804 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ECM16YMR128W RRP5Q05022 1729 aaKnown RBP4.54□□□□□ -1.68
ECM16YMR128W PDI1P17967 522 aaKnown RBP4.53□□□□□ -1.68
ECM16YMR128W MNN4P36044 1178 aa4.53□□□□□ -1.68
ECM16YMR128W CWC15Q03772 175 aaKnown RBP4.53□□□□□ -1.68
ECM16YMR128W ITT1Q04638 464 aa4.53□□□□□ -1.68
ECM16YMR128W ROM2P51862 1356 aaKnown RBP4.53□□□□□ -1.68
ECM16YMR128W MCM2P29469 868 aa4.53□□□□□ -1.68
ECM16YMR128W TGL4P36165 910 aa4.53□□□□□ -1.68
ECM16YMR128W CIR1P42940 261 aa4.53□□□□□ -1.68
ECM16YMR128W WHI5Q12416 295 aa4.53□□□□□ -1.68
ECM16YMR128W YRF1-4O13559 1382 aa4.53□□□□□ -1.68
ECM16YMR128W RPS24AP0CX31 135 aaKnown RBP4.53□□□□□ -1.68
ECM16YMR128W RPS24BP0CX32 135 aaKnown RBP4.53□□□□□ -1.68
ECM16YMR128W RKM3P38222 552 aa4.53□□□□□ -1.68
ECM16YMR128W RFC1P38630 861 aaKnown RBP4.53□□□□□ -1.68
ECM16YMR128W PKH3Q03306 898 aaPredicted RBP4.53□□□□□ -1.68
ECM16YMR128W TFB4Q12004 338 aa4.53□□□□□ -1.68
ECM16YMR128W ATE1P16639 503 aa4.52□□□□□ -1.69
ECM16YMR128W NAP1P25293 417 aaKnown RBP4.52□□□□□ -1.69
ECM16YMR128W SCT1P32784 759 aa4.52□□□□□ -1.69
ECM16YMR128W MDG1P53885 366 aa4.52□□□□□ -1.69
ECM16YMR128W HAP5Q02516 242 aa4.52□□□□□ -1.69
ECM16YMR128W SRT1Q03175 343 aa4.52□□□□□ -1.69
ECM16YMR128W VPS20Q04272 221 aa4.52□□□□□ -1.69
ECM16YMR128W LEU2P04173 364 aaPredicted RBP4.52□□□□□ -1.69
ECM16YMR128W TRM1P15565 570 aaKnown RBP4.52□□□□□ -1.69
ECM16YMR128W RIA1P53893 1110 aa4.52□□□□□ -1.69
ECM16YMR128W GCR2Q01722 534 aa4.52□□□□□ -1.69
ECM16YMR128W SUV3P32580 737 aa4.51□□□□□ -1.69
ECM16YMR128W ISM1P48526 1002 aa4.51□□□□□ -1.69
ECM16YMR128W SSL2Q00578 843 aa4.51□□□□□ -1.69
ECM16YMR128W MOD5P07884 428 aa4.51□□□□□ -1.69
ECM16YMR128W KEX2P13134 814 aa4.51□□□□□ -1.69
ECM16YMR128W DPL1Q05567 589 aa4.51□□□□□ -1.69
ECM16YMR128W SDH2P21801 266 aa4.51□□□□□ -1.69
ECM16YMR128W AKL1P38080 1108 aaKnown RBP4.51□□□□□ -1.69
ECM16YMR128W YNG2P38806 282 aaKnown RBP4.51□□□□□ -1.69
ECM16YMR128W MDJ2P42834 146 aa4.51□□□□□ -1.69
ECM16YMR128W LCD1Q04377 747 aa4.51□□□□□ -1.69
ECM16YMR128W RAD50P12753 1312 aa4.51□□□□□ -1.69
ECM16YMR128W KRE33P53914 1056 aaKnown RBP4.5□□□□□ -1.69
ECM16YMR128W BUD20Q08004 166 aaPredicted RBP4.5□□□□□ -1.69
ECM16YMR128W TY4B-HP0C2J7 1802 aa4.5□□□□□ -1.69
ECM16YMR128W TY4B-JP47024 1803 aa4.5□□□□□ -1.69
ECM16YMR128W CLB5P30283 435 aa4.5□□□□□ -1.69
ECM16YMR128W RVS167P39743 482 aaKnown RBP4.5□□□□□ -1.69
ECM16YMR128W PML39Q03760 334 aa4.5□□□□□ -1.69
ECM16YMR128W YPR204WQ08995 1032 aa4.5□□□□□ -1.69
ECM16YMR128W HRQ1Q05549 1077 aa4.5□□□□□ -1.69
ECM16YMR128W RPO41P13433 1351 aaKnown RBP4.49□□□□□ -1.69
ECM16YMR128W DPS1P04802 557 aaKnown RBP4.49□□□□□ -1.69
ECM16YMR128W MBR1P23493 339 aa4.49□□□□□ -1.69
ECM16YMR128W NMD2P38798 1089 aaKnown RBP4.49□□□□□ -1.69
ECM16YMR128W HAL5P38970 855 aaKnown RBP4.49□□□□□ -1.69
ECM16YMR128W TUB4P53378 473 aa4.49□□□□□ -1.69
ECM16YMR128W NMA111P53920 997 aa4.49□□□□□ -1.69
ECM16YMR128W YNL115CP53925 644 aa4.49□□□□□ -1.69
ECM16YMR128W STB3Q12427 513 aa4.49□□□□□ -1.69
ECM16YMR128W SWC3P31376 625 aa4.49□□□□□ -1.69
ECM16YMR128W ISF1P32488 338 aa4.49□□□□□ -1.69
ECM16YMR128W ALD2P47771 506 aa4.49□□□□□ -1.69
ECM16YMR128W RTF1P53064 558 aa4.49□□□□□ -1.69
ECM16YMR128W RAD24P32641 659 aa4.49□□□□□ -1.69
ECM16YMR128W GYP7P48365 746 aa4.49□□□□□ -1.69
ECM16YMR128W DID4P36108 232 aa4.48□□□□□ -1.69
ECM16YMR128W KIC1P38692 1080 aa4.48□□□□□ -1.69
ECM16YMR128W ROM1P53046 1155 aa4.48□□□□□ -1.69
ECM16YMR128W APC11Q12157 165 aa4.48□□□□□ -1.69
ECM16YMR128W SSA4P22202 642 aaKnown RBP4.48□□□□□ -1.69
ECM16YMR128W RPN12P32496 274 aa4.48□□□□□ -1.69
ECM16YMR128W GRX4P32642 244 aa4.48□□□□□ -1.69
ECM16YMR128W YBL036CP38197 257 aa4.48□□□□□ -1.69
ECM16YMR128W GPI13Q07830 1017 aa4.48□□□□□ -1.69
ECM16YMR128W YRR1Q12172 810 aa4.48□□□□□ -1.69
ECM16YMR128W COQ4O13525 335 aa4.48□□□□□ -1.69
ECM16YMR128W BOL3P39724 118 aa4.48□□□□□ -1.69
ECM16YMR128W MTR4P47047 1073 aaKnown RBP4.48□□□□□ -1.69
ECM16YMR128W BDH2P39713 417 aa4.47□□□□□ -1.69
ECM16YMR128W PAC1P39946 494 aaKnown RBP4.47□□□□□ -1.69
ECM16YMR128W PEX29Q03370 554 aa4.47□□□□□ -1.69
ECM16YMR128W MCM16Q12262 181 aa4.47□□□□□ -1.69
ECM16YMR128W NTH2P35172 780 aa4.47□□□□□ -1.69
ECM16YMR128W YNL050CP53952 270 aa4.47□□□□□ -1.69
ECM16YMR128W BMS1Q08965 1183 aaKnown RBP4.47□□□□□ -1.69
ECM16YMR128W MNL2Q12205 849 aa4.47□□□□□ -1.69
ECM16YMR128W NOP58Q12499 511 aaKnown RBP4.47□□□□□ -1.69
ECM16YMR128W ZDS1P50111 915 aaKnown RBP4.47□□□□□ -1.69
ECM16YMR128W RMD1Q03441 430 aa4.47□□□□□ -1.69
ECM16YMR128W RPS19AP07280 144 aaKnown RBP4.46□□□□□ -1.69
ECM16YMR128W RPS19BP07281 144 aaPredicted RBP4.46□□□□□ -1.69
ECM16YMR128W SLY41P22215 453 aa4.46□□□□□ -1.69
ECM16YMR128W FIG4P42837 879 aa4.46□□□□□ -1.69
ECM16YMR128W RPS0BP46654 252 aaKnown RBP4.46□□□□□ -1.69
ECM16YMR128W CWH41P53008 833 aa4.46□□□□□ -1.69
ECM16YMR128W RAD26P40352 1085 aa4.46□□□□□ -1.7
ECM16YMR128W JIP4Q03361 876 aa4.46□□□□□ -1.7
ECM16YMR128W FRA1Q07825 749 aa4.46□□□□□ -1.7
ECM16YMR128W CTI6Q08923 506 aa4.46□□□□□ -1.7
ECM16YMR128W YRF1-2P40105 1681 aa4.46□□□□□ -1.7
ECM16YMR128W CDC16P09798 840 aa4.46□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 25.3 ms