RNA–Protein interactions for RNA: YMR038C

CCS1, Transcript of Copper chaperone for superoxide dismutase Sod1p, yeastyeast

Gene CCS1, Length 750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CCS1YMR038C PUP1P25043 261 aa7.01□□□□□ -1.29
CCS1YMR038C YMR074CQ04773 145 aa7.01□□□□□ -1.29
CCS1YMR038C TRK1P12685 1235 aa7□□□□□ -1.29
CCS1YMR038C ISU1Q03020 165 aa7□□□□□ -1.29
CCS1YMR038C DFG5Q05031 458 aa7□□□□□ -1.29
CCS1YMR038C NOB1Q08444 459 aaKnown RBP7□□□□□ -1.29
CCS1YMR038C MSB3P48566 633 aaPredicted RBP6.99□□□□□ -1.29
CCS1YMR038C BUD21Q08492 214 aaPredicted RBP6.99□□□□□ -1.29
CCS1YMR038C STE6P12866 1290 aa6.98□□□□□ -1.29
CCS1YMR038C HST3P53687 447 aa6.98□□□□□ -1.29
CCS1YMR038C HDA3Q06623 655 aa6.98□□□□□ -1.29
CCS1YMR038C CBC2Q08920 208 aaKnown RBP RIP-Chip data6.98□□□□□ -1.29not detected
CCS1YMR038C SPT2P06843 333 aaPredicted RBP6.97□□□□□ -1.29
CCS1YMR038C MIP1P15801 1254 aa6.97□□□□□ -1.29
CCS1YMR038C YML083CQ04526 418 aa6.97□□□□□ -1.29
CCS1YMR038C GAL2P13181 574 aa6.96□□□□□ -1.3
CCS1YMR038C UGA3P26370 528 aa6.96□□□□□ -1.3
CCS1YMR038C ECM23Q02710 187 aa6.96□□□□□ -1.3
CCS1YMR038C PDR5P33302 1511 aaKnown RBP6.96□□□□□ -1.3
CCS1YMR038C PHO87P25360 923 aa6.95□□□□□ -1.3
CCS1YMR038C ACS2P52910 683 aaKnown RBP6.95□□□□□ -1.3
CCS1YMR038C UTR2P32623 467 aa6.94□□□□□ -1.3
CCS1YMR038C YJR115WP47152 169 aa6.94□□□□□ -1.3
CCS1YMR038C BDS1Q08347 646 aa6.94□□□□□ -1.3
CCS1YMR038C TSC13Q99190 310 aa6.94□□□□□ -1.3
CCS1YMR038C PDI1P17967 522 aaKnown RBP6.93□□□□□ -1.3
CCS1YMR038C AIM9P40053 627 aaKnown RBP6.93□□□□□ -1.3
CCS1YMR038C ENT1Q12518 454 aa6.93□□□□□ -1.3
CCS1YMR038C PDR11P40550 1411 aa6.93□□□□□ -1.3
CCS1YMR038C SLX8P40072 274 aa6.92□□□□□ -1.3
CCS1YMR038C AAD14P42884 376 aa6.92□□□□□ -1.3
CCS1YMR038C PTK2P47116 818 aaKnown RBP6.92□□□□□ -1.3
CCS1YMR038C WTM2Q12206 467 aa6.92□□□□□ -1.3
CCS1YMR038C HAP4P14064 554 aa6.91□□□□□ -1.3
CCS1YMR038C ROM1P53046 1155 aa6.91□□□□□ -1.3
CCS1YMR038C RIA1P53893 1110 aa6.91□□□□□ -1.3
CCS1YMR038C SSA1P10591 642 aaKnown RBP6.9□□□□□ -1.3
CCS1YMR038C DAT1P13483 248 aaKnown RBP6.9□□□□□ -1.3
CCS1YMR038C BRE2P43132 505 aa6.9□□□□□ -1.3
CCS1YMR038C YFL034WP43564 1073 aa6.9□□□□□ -1.3
CCS1YMR038C NTH2P35172 780 aa6.89□□□□□ -1.31
CCS1YMR038C UBX7P38349 436 aa6.89□□□□□ -1.31
CCS1YMR038C ARG82P07250 355 aa6.88□□□□□ -1.31
CCS1YMR038C SWI5P08153 709 aa6.88□□□□□ -1.31
CCS1YMR038C TBS1P38114 1094 aa6.88□□□□□ -1.31
CCS1YMR038C IMH1Q06704 911 aaKnown RBP6.88□□□□□ -1.31
CCS1YMR038C GAS4Q08271 471 aa6.88□□□□□ -1.31
CCS1YMR038C BCK1Q01389 1478 aa6.87□□□□□ -1.31
CCS1YMR038C RPS6AP0CX37 236 aaKnown RBP6.87□□□□□ -1.31
CCS1YMR038C RPS6BP0CX38 236 aaPredicted RBP6.87□□□□□ -1.31
CCS1YMR038C RPP2BP02400 110 aaKnown RBP6.86□□□□□ -1.31
CCS1YMR038C UBP1P25037 809 aa6.86□□□□□ -1.31
CCS1YMR038C SRF1Q12516 437 aa6.86□□□□□ -1.31
CCS1YMR038C KRE5P22023 1365 aa6.85□□□□□ -1.31
CCS1YMR038C GEF1P37020 779 aa6.85□□□□□ -1.31
CCS1YMR038C DLD3P39976 496 aaKnown RBP6.85□□□□□ -1.31
CCS1YMR038C UTP7P40055 554 aaKnown RBP6.85□□□□□ -1.31
CCS1YMR038C NUP85P46673 744 aa6.85□□□□□ -1.31
CCS1YMR038C DLD1P32891 587 aa6.84□□□□□ -1.31
CCS1YMR038C YNR029CP53729 429 aaKnown RBP6.84□□□□□ -1.31
CCS1YMR038C GCR2Q01722 534 aa6.84□□□□□ -1.31
CCS1YMR038C YPQ2Q06328 317 aa6.84□□□□□ -1.31
CCS1YMR038C CYT1P07143 309 aa6.83□□□□□ -1.32
CCS1YMR038C SUM1P46676 1062 aa6.83□□□□□ -1.32
CCS1YMR038C YJR098CP47139 656 aa6.82□□□□□ -1.32
CCS1YMR038C SSN3P39073 555 aa6.81□□□□□ -1.32
CCS1YMR038C RPL34AP87262 121 aaPredicted RBP6.81□□□□□ -1.32
CCS1YMR038C CWC15Q03772 175 aaKnown RBP6.81□□□□□ -1.32
CCS1YMR038C VAN1P23642 535 aa6.8□□□□□ -1.32
CCS1YMR038C SUV3P32580 737 aa6.8□□□□□ -1.32
CCS1YMR038C UGA2P38067 497 aa6.8□□□□□ -1.32
CCS1YMR038C TPS3P38426 1054 aaKnown RBP6.8□□□□□ -1.32
CCS1YMR038C LSC2P53312 427 aa6.8□□□□□ -1.32
CCS1YMR038C CFT1Q06632 1357 aaKnown RBP6.8□□□□□ -1.32
CCS1YMR038C PUF6Q04373 656 aaKnown RBP6.79□□□□□ -1.32
CCS1YMR038C SSM4P40318 1319 aa6.78□□□□□ -1.32
CCS1YMR038C NGR1P32831 672 aaKnown RBP6.78□□□□□ -1.32
CCS1YMR038C OPT2Q06593 877 aa6.78□□□□□ -1.32
CCS1YMR038C TRS33Q99394 268 aa6.78□□□□□ -1.32
CCS1YMR038C MCM1P11746 286 aa6.77□□□□□ -1.33
CCS1YMR038C MSN5P52918 1224 aa6.77□□□□□ -1.33
CCS1YMR038C TCB1Q12466 1186 aa6.77□□□□□ -1.33
CCS1YMR038C GCN2P15442 1659 aa6.77□□□□□ -1.33
CCS1YMR038C MET22P32179 357 aa6.76□□□□□ -1.33
CCS1YMR038C DAL1P32375 460 aa6.76□□□□□ -1.33
CCS1YMR038C VTC4P47075 721 aa6.76□□□□□ -1.33
CCS1YMR038C IKI3Q06706 1349 aaKnown RBP6.76□□□□□ -1.33
CCS1YMR038C SLA1P32790 1244 aa6.75□□□□□ -1.33
CCS1YMR038C SHM1P37292 490 aaPredicted RBP6.75□□□□□ -1.33
CCS1YMR038C ALD4P46367 519 aaKnown RBP6.75□□□□□ -1.33
CCS1YMR038C PUN1Q06991 263 aa6.75□□□□□ -1.33
CCS1YMR038C TY1A-DR3Q12441 440 aa6.75□□□□□ -1.33
CCS1YMR038C NUP192P47054 1683 aa6.74□□□□□ -1.33
CCS1YMR038C SRS2P12954 1174 aa6.74□□□□□ -1.33
CCS1YMR038C PRP45P28004 379 aaPredicted RBP6.74□□□□□ -1.33
CCS1YMR038C CDC3P32457 520 aaKnown RBP6.74□□□□□ -1.33
CCS1YMR038C ALA1P40825 983 aaKnown RBP6.74□□□□□ -1.33
CCS1YMR038C YJL181WP46987 611 aa6.74□□□□□ -1.33
CCS1YMR038C JJJ2P46997 583 aa6.74□□□□□ -1.33
CCS1YMR038C LCB5Q06147 687 aaKnown RBP6.74□□□□□ -1.33
Retrieved 100 of 5,963 RNA–protein pairs in 8 ms