RNA–Protein interactions for RNA: YLR340W

RPP0, Transcript of Conserved ribosomal protein P0 of the ribosomal stalk, yeastyeast

Gene RPP0, Length 939 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPP0YLR340W TAO3P40468 2376 aa6.15□□□□□ -1.43
RPP0YLR340W AKL1P38080 1108 aaKnown RBP6.14□□□□□ -1.43
RPP0YLR340W EMP47P43555 445 aa6.14□□□□□ -1.43
RPP0YLR340W DPL1Q05567 589 aa6.14□□□□□ -1.43
RPP0YLR340W AOS1Q06624 347 aa6.14□□□□□ -1.43
RPP0YLR340W KCC4P25389 1037 aa6.13□□□□□ -1.43
RPP0YLR340W RPN1P38764 993 aaKnown RBP6.13□□□□□ -1.43
RPP0YLR340W BNI4P53858 892 aa6.13□□□□□ -1.43
RPP0YLR340W CWC15Q03772 175 aaKnown RBP6.13□□□□□ -1.43
RPP0YLR340W SSP2Q08646 371 aa6.13□□□□□ -1.43
RPP0YLR340W HVG1P0CE11 249 aa6.12□□□□□ -1.43
RPP0YLR340W FRD1P32614 470 aaKnown RBP6.12□□□□□ -1.43
RPP0YLR340W UBP14P38237 781 aaKnown RBP6.12□□□□□ -1.43
RPP0YLR340W NCS6P53088 359 aa6.12□□□□□ -1.43
RPP0YLR340W TRM44Q02648 567 aaKnown RBP6.12□□□□□ -1.43
RPP0YLR340W SAS4Q04003 481 aa6.12□□□□□ -1.43
RPP0YLR340W HKR1P41809 1802 aa6.11□□□□□ -1.43
RPP0YLR340W ARG8P18544 423 aa6.11□□□□□ -1.43
RPP0YLR340W BSD2P38356 321 aa6.11□□□□□ -1.43
RPP0YLR340W PTC2P39966 464 aaKnown RBP6.11□□□□□ -1.43
RPP0YLR340W YGR117CP53270 476 aa6.11□□□□□ -1.43
RPP0YLR340W SYF1Q04048 859 aaPredicted RBP6.11□□□□□ -1.43
RPP0YLR340W PAM1P37304 830 aaKnown RBP6.1□□□□□ -1.43
RPP0YLR340W VPS4P52917 437 aa6.1□□□□□ -1.43
RPP0YLR340W PAP2P53632 584 aaKnown RBP6.1□□□□□ -1.43
RPP0YLR340W YML082WQ04533 649 aaKnown RBP6.1□□□□□ -1.43
RPP0YLR340W YLR326WQ06170 240 aaKnown RBP6.1□□□□□ -1.43
RPP0YLR340W NTH2P35172 780 aa6.09□□□□□ -1.43
RPP0YLR340W SSK22P25390 1331 aaPredicted RBP6.08□□□□□ -1.44
RPP0YLR340W HPR1P17629 752 aaKnown RBP6.08□□□□□ -1.44
RPP0YLR340W STV1P37296 890 aa6.08□□□□□ -1.44
RPP0YLR340W HAT1Q12341 374 aa6.08□□□□□ -1.44
RPP0YLR340W CSR2Q12734 1121 aa6.08□□□□□ -1.44
RPP0YLR340W PCS60P38137 543 aaKnown RBP RIP-Chip data6.07□□□□□ -1.44not detected
RPP0YLR340W CDC73Q06697 393 aa6.07□□□□□ -1.44
RPP0YLR340W YPR204WQ08995 1032 aa6.07□□□□□ -1.44
RPP0YLR340W ISU2Q12056 156 aa6.07□□□□□ -1.44
RPP0YLR340W AFG2P32794 780 aa6.06□□□□□ -1.44
RPP0YLR340W MOT2P34909 587 aaKnown RBP6.06□□□□□ -1.44
RPP0YLR340W APL2P36000 726 aaPredicted RBP6.06□□□□□ -1.44
RPP0YLR340W MAL31P38156 614 aa6.06□□□□□ -1.44
RPP0YLR340W PNT1P38969 423 aa6.06□□□□□ -1.44
RPP0YLR340W GAS5Q08193 484 aa6.06□□□□□ -1.44
RPP0YLR340W UGA3P26370 528 aa6.05□□□□□ -1.44
RPP0YLR340W RRT6P53117 311 aaPredicted RBP6.05□□□□□ -1.44
RPP0YLR340W CRF1Q04930 467 aa6.05□□□□□ -1.44
RPP0YLR340W LYS2P07702 1392 aa6.05□□□□□ -1.44
RPP0YLR340W RAD54P32863 898 aa6.04□□□□□ -1.44
RPP0YLR340W APE3P37302 537 aaKnown RBP6.04□□□□□ -1.44
RPP0YLR340W RSC30P38781 883 aa6.04□□□□□ -1.44
RPP0YLR340W PDS5Q04264 1277 aa6.04□□□□□ -1.44
RPP0YLR340W RRG1Q12167 365 aaPredicted RBP6.04□□□□□ -1.44
RPP0YLR340W GSC2P40989 1895 aa6.04□□□□□ -1.44
RPP0YLR340W NSE3Q05541 303 aa6.03□□□□□ -1.44
RPP0YLR340W TRK1P12685 1235 aa6.02□□□□□ -1.45
RPP0YLR340W CBP1P07252 654 aa6.01□□□□□ -1.45
RPP0YLR340W KRE2P27809 442 aa6.01□□□□□ -1.45
RPP0YLR340W YDR090CQ03193 310 aa6.01□□□□□ -1.45
RPP0YLR340W VPS64Q03944 604 aa6.01□□□□□ -1.45
RPP0YLR340W YPR015CQ12531 247 aa6.01□□□□□ -1.45
RPP0YLR340W RAM1P22007 431 aa6□□□□□ -1.45
RPP0YLR340W SEN54Q02825 467 aaPredicted RBP6□□□□□ -1.45
RPP0YLR340W UBX2Q04228 584 aa6□□□□□ -1.45
RPP0YLR340W RBA50Q04418 439 aa6□□□□□ -1.45
RPP0YLR340W FLO11P08640 1367 aa6□□□□□ -1.45
RPP0YLR340W YNL050CP53952 270 aa5.99□□□□□ -1.45
RPP0YLR340W ZDS2P54786 942 aa5.99□□□□□ -1.45
RPP0YLR340W YPR148CQ06523 435 aa5.99□□□□□ -1.45
RPP0YLR340W RPP1BP10622 106 aaKnown RBP5.98□□□□□ -1.45
RPP0YLR340W PDR1P12383 1068 aa5.98□□□□□ -1.45
RPP0YLR340W ICP55P40051 511 aa5.98□□□□□ -1.45
RPP0YLR340W REF2P42073 533 aaPredicted RBP5.98□□□□□ -1.45
RPP0YLR340W DPH6Q12429 685 aa5.98□□□□□ -1.45
RPP0YLR340W KIC1P38692 1080 aa5.97□□□□□ -1.45
RPP0YLR340W UTP7P40055 554 aaKnown RBP5.97□□□□□ -1.45
RPP0YLR340W GSM1P42950 618 aa5.97□□□□□ -1.45
RPP0YLR340W RRP46P53256 223 aaPredicted RBP5.97□□□□□ -1.45
RPP0YLR340W RPT4P53549 437 aaKnown RBP5.97□□□□□ -1.45
RPP0YLR340W YVH1Q02256 364 aaKnown RBP5.97□□□□□ -1.45
RPP0YLR340W PKH1Q03407 766 aa5.97□□□□□ -1.45
RPP0YLR340W SGD1Q06132 899 aa5.97□□□□□ -1.45
RPP0YLR340W ASH1P34233 588 aa5.96□□□□□ -1.46
RPP0YLR340W SPL2P38839 148 aa5.96□□□□□ -1.46
RPP0YLR340W FCP1Q03254 732 aa5.96□□□□□ -1.46
RPP0YLR340W COQ4O13525 335 aa5.95□□□□□ -1.46
RPP0YLR340W POL5P39985 1022 aaKnown RBP5.95□□□□□ -1.46
RPP0YLR340W VPS70P47161 811 aa5.95□□□□□ -1.46
RPP0YLR340W MTC3P53077 123 aa5.95□□□□□ -1.46
RPP0YLR340W PRP42Q03776 544 aaKnown RBP5.95□□□□□ -1.46
RPP0YLR340W YLR225CQ05948 407 aaKnown RBP5.95□□□□□ -1.46
RPP0YLR340W FBP1P09201 348 aa5.94□□□□□ -1.46
RPP0YLR340W BMS1Q08965 1183 aaKnown RBP5.94□□□□□ -1.46
RPP0YLR340W GAL2P13181 574 aa5.93□□□□□ -1.46
RPP0YLR340W RPS7AP26786 190 aaKnown RBP5.93□□□□□ -1.46
RPP0YLR340W MGM1P32266 881 aa5.93□□□□□ -1.46
RPP0YLR340W PAH1P32567 862 aa5.93□□□□□ -1.46
RPP0YLR340W NIT1P40447 199 aa5.93□□□□□ -1.46
RPP0YLR340W SPR3P41901 512 aa5.93□□□□□ -1.46
RPP0YLR340W ZDS1P50111 915 aaKnown RBP5.93□□□□□ -1.46
RPP0YLR340W TOS4Q06266 489 aa5.93□□□□□ -1.46
Retrieved 100 of 5,963 RNA–protein pairs in 33.9 ms