RNA–Protein interactions for RNA: YLR117C

CLF1, Transcript of Member of the NineTeen Complex (NTC), yeast

Gene CLF1, Length 2,064 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CLF1	YLR117C	RGD1	P38339	666 aa		5.39	□□□□□ -1.55
CLF1	YLR117C	TOM71	P38825	639 aa	Known RBP	5.39	□□□□□ -1.55
CLF1	YLR117C	UBP9	P39967	754 aa		5.39	□□□□□ -1.55
CLF1	YLR117C	EPS1	P40557	701 aa		5.39	□□□□□ -1.55
CLF1	YLR117C	ARR1	Q06596	294 aa		5.39	□□□□□ -1.55
CLF1	YLR117C	KRE5	P22023	1365 aa		5.39	□□□□□ -1.55
CLF1	YLR117C	KEX2	P13134	814 aa		5.39	□□□□□ -1.55
CLF1	YLR117C	TOA1	P32773	286 aa		5.39	□□□□□ -1.55
CLF1	YLR117C	SEC9	P40357	651 aa		5.39	□□□□□ -1.55
CLF1	YLR117C	TFG1	P41895	735 aa	Predicted RBP	5.39	□□□□□ -1.55
CLF1	YLR117C	INP52	P50942	1183 aa		5.39	□□□□□ -1.55
CLF1	YLR117C	SCT1	P32784	759 aa		5.38	□□□□□ -1.55
CLF1	YLR117C	RTR1	P40084	226 aa	Predicted RBP	5.38	□□□□□ -1.55
CLF1	YLR117C	STE20	Q03497	939 aa	Known RBP	5.38	□□□□□ -1.55
CLF1	YLR117C	CLN1	P20437	546 aa		5.38	□□□□□ -1.55
CLF1	YLR117C	BDF1	P35817	686 aa		5.38	□□□□□ -1.55
CLF1	YLR117C	HEL1	P36113	551 aa		5.38	□□□□□ -1.55
CLF1	YLR117C	BRN1	P38170	754 aa		5.38	□□□□□ -1.55
CLF1	YLR117C	YJR142W	P47173	342 aa		5.38	□□□□□ -1.55
CLF1	YLR117C	ALD2	P47771	506 aa		5.38	□□□□□ -1.55
CLF1	YLR117C	RRP46	P53256	223 aa	Predicted RBP	5.38	□□□□□ -1.55
CLF1	YLR117C	NKP2	Q06162	153 aa		5.38	□□□□□ -1.55
CLF1	YLR117C	SIR4	P11978	1358 aa		5.37	□□□□□ -1.55
CLF1	YLR117C	RNR2	P09938	399 aa	Known RBP	5.37	□□□□□ -1.55
CLF1	YLR117C	ATE1	P16639	503 aa		5.37	□□□□□ -1.55
CLF1	YLR117C	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	5.37	□□□□□ -1.55	not detected
CLF1	YLR117C	EXO84	P38261	753 aa		5.37	□□□□□ -1.55
CLF1	YLR117C	NPR3	P38742	1146 aa		5.37	□□□□□ -1.55
CLF1	YLR117C	CTH1	P47976	325 aa		5.37	□□□□□ -1.55
CLF1	YLR117C	YDR338C	Q05497	695 aa		5.37	□□□□□ -1.55
CLF1	YLR117C	OMS1	Q06668	471 aa		5.37	□□□□□ -1.55
CLF1	YLR117C	RTC1	Q08281	1341 aa		5.37	□□□□□ -1.55
CLF1	YLR117C	IML1	P47170	1584 aa		5.37	□□□□□ -1.55
CLF1	YLR117C	HXT13	P39924	564 aa		5.36	□□□□□ -1.55
CLF1	YLR117C	JJJ1	P53863	590 aa		5.36	□□□□□ -1.55
CLF1	YLR117C	HEF3	P53978	1044 aa	Known RBP	5.36	□□□□□ -1.55
CLF1	YLR117C	SRC1	Q03707	834 aa		5.36	□□□□□ -1.55
CLF1	YLR117C	INP2	Q03824	705 aa		5.36	□□□□□ -1.55
CLF1	YLR117C	VMS1	Q04311	632 aa	Known RBP	5.36	□□□□□ -1.55
CLF1	YLR117C	THI22	Q06490	572 aa		5.36	□□□□□ -1.55
CLF1	YLR117C	CMS1	Q07897	291 aa	Known RBP	5.36	□□□□□ -1.55
CLF1	YLR117C	CDC37	P06101	506 aa	Known RBP	5.36	□□□□□ -1.55
CLF1	YLR117C	STE11	P23561	717 aa		5.36	□□□□□ -1.55
CLF1	YLR117C	CDC3	P32457	520 aa	Known RBP	5.36	□□□□□ -1.55
CLF1	YLR117C	TTI1	P36097	1038 aa		5.36	□□□□□ -1.55
CLF1	YLR117C	ESL2	P36168	1195 aa		5.36	□□□□□ -1.55
CLF1	YLR117C	MRX12	P47084	519 aa		5.36	□□□□□ -1.55
CLF1	YLR117C	LCB5	Q06147	687 aa	Known RBP	5.36	□□□□□ -1.55
CLF1	YLR117C	ATG9	Q12142	997 aa		5.36	□□□□□ -1.55
CLF1	YLR117C	MAK21	Q12176	1025 aa	Known RBP	5.36	□□□□□ -1.55
CLF1	YLR117C	GLE1	Q12315	538 aa		5.36	□□□□□ -1.55
CLF1	YLR117C	SMC6	Q12749	1114 aa		5.36	□□□□□ -1.55
CLF1	YLR117C	RAV1	P47104	1357 aa		5.36	□□□□□ -1.55
CLF1	YLR117C	TRL1	P09880	827 aa	Known RBP	5.35	□□□□□ -1.55
CLF1	YLR117C	CDC60	P26637	1090 aa	Known RBP	5.35	□□□□□ -1.55
CLF1	YLR117C	ELM1	P32801	640 aa		5.35	□□□□□ -1.55
CLF1	YLR117C	UBP14	P38237	781 aa	Known RBP	5.35	□□□□□ -1.55
CLF1	YLR117C	LAM1	P38851	1228 aa		5.35	□□□□□ -1.55
CLF1	YLR117C	CCT5	P40413	562 aa	Known RBP	5.35	□□□□□ -1.55
CLF1	YLR117C	YRB1	P41920	201 aa	Known RBP	5.35	□□□□□ -1.55
CLF1	YLR117C	RRB1	Q04225	511 aa	Known RBP	5.35	□□□□□ -1.55
CLF1	YLR117C	BRF1	P29056	596 aa		5.35	□□□□□ -1.55
CLF1	YLR117C	CSE4	P36012	229 aa		5.35	□□□□□ -1.55
CLF1	YLR117C	SPT8	P38915	602 aa		5.35	□□□□□ -1.55
CLF1	YLR117C	NKP1	Q12493	238 aa		5.35	□□□□□ -1.55
CLF1	YLR117C	TRS33	Q99394	268 aa		5.35	□□□□□ -1.55
CLF1	YLR117C	TRP5	P00931	707 aa	Known RBP	5.34	□□□□□ -1.55
CLF1	YLR117C	KRS1	P15180	591 aa	Known RBP	5.34	□□□□□ -1.55
CLF1	YLR117C	FKH1	P40466	484 aa		5.34	□□□□□ -1.55
CLF1	YLR117C	SPR3	P41901	512 aa		5.34	□□□□□ -1.55
CLF1	YLR117C	SUB1	P54000	292 aa	Known RBP	5.34	□□□□□ -1.55
CLF1	YLR117C	CIR2	Q08822	631 aa		5.34	□□□□□ -1.55
CLF1	YLR117C	GCD6	P32501	712 aa	Known RBP	5.33	□□□□□ -1.56
CLF1	YLR117C	MUD2	P36084	527 aa	Known RBP	5.33	□□□□□ -1.56
CLF1	YLR117C	ILV3	P39522	585 aa	Known RBP	5.33	□□□□□ -1.56
CLF1	YLR117C	HXT17	P53631	564 aa		5.33	□□□□□ -1.56
CLF1	YLR117C	YMR196W	Q04336	1088 aa		5.33	□□□□□ -1.56
CLF1	YLR117C	TY4A-H	Q6Q5P6	413 aa		5.33	□□□□□ -1.56
CLF1	YLR117C	SWI6	P09959	803 aa		5.33	□□□□□ -1.56
CLF1	YLR117C	HSC82	P15108	705 aa	Known RBP	5.33	□□□□□ -1.56
CLF1	YLR117C	FRS2	P15625	503 aa	Known RBP	5.33	□□□□□ -1.56
CLF1	YLR117C	PRP16	P15938	1071 aa	Predicted RBP	5.33	□□□□□ -1.56
CLF1	YLR117C	SPE2	P21182	396 aa		5.33	□□□□□ -1.56
CLF1	YLR117C	PRD1	P25375	712 aa		5.33	□□□□□ -1.56
CLF1	YLR117C	RRP1	P35178	278 aa	Predicted RBP	5.33	□□□□□ -1.56
CLF1	YLR117C	BEM4	P39011	633 aa		5.33	□□□□□ -1.56
CLF1	YLR117C	RTF1	P53064	558 aa		5.33	□□□□□ -1.56
CLF1	YLR117C	IST1	P53843	298 aa	Predicted RBP	5.33	□□□□□ -1.56
CLF1	YLR117C	CUS1	Q02554	436 aa	Predicted RBP	5.33	□□□□□ -1.56
CLF1	YLR117C	RBA50	Q04418	439 aa		5.33	□□□□□ -1.56
CLF1	YLR117C	ABP140	Q08641	628 aa	Known RBP	5.33	□□□□□ -1.56
CLF1	YLR117C	SWI1	P09547	1314 aa		5.32	□□□□□ -1.56
CLF1	YLR117C	KAR9	P32526	644 aa		5.32	□□□□□ -1.56
CLF1	YLR117C	ISW1	P38144	1129 aa		5.32	□□□□□ -1.56
CLF1	YLR117C	OSW7	P43611	510 aa		5.32	□□□□□ -1.56
CLF1	YLR117C	ALD4	P46367	519 aa	Known RBP	5.32	□□□□□ -1.56
CLF1	YLR117C	BBC1	P47068	1157 aa		5.32	□□□□□ -1.56
CLF1	YLR117C	SHE4	P51534	789 aa		5.32	□□□□□ -1.56
CLF1	YLR117C	HUL5	P53119	910 aa		5.32	□□□□□ -1.56
CLF1	YLR117C	RIA1	P53893	1110 aa		5.32	□□□□□ -1.56

Retrieved 100 of 5,963 RNA–protein pairs in 55.7 ms