RNA–Protein interactions for RNA: YJL097W

PHS1, Transcript of Essential 3-hydroxyacyl-CoA dehydratase of the ER membrane, yeast

Gene PHS1, Length 654 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PHS1	YJL097W	YCR015C	P25616	317 aa		4.13	□□□□□ -1.75
PHS1	YJL097W	CSE4	P36012	229 aa		4.13	□□□□□ -1.75
PHS1	YJL097W	MTO1	P53070	669 aa		4.13	□□□□□ -1.75
PHS1	YJL097W	YKL222C	P35995	705 aa		4.12	□□□□□ -1.75
PHS1	YJL097W	NCL1	P38205	684 aa	Known RBP	4.12	□□□□□ -1.75
PHS1	YJL097W	AKR1	P39010	764 aa		4.12	□□□□□ -1.75
PHS1	YJL097W	GIS1	Q03833	894 aa		4.12	□□□□□ -1.75
PHS1	YJL097W	RPS6A	P0CX37	236 aa	Known RBP	4.11	□□□□□ -1.75
PHS1	YJL097W	RPS6B	P0CX38	236 aa	Predicted RBP	4.11	□□□□□ -1.75
PHS1	YJL097W	SEG2	P34250	1132 aa		4.11	□□□□□ -1.75
PHS1	YJL097W	SEA4	P38164	1038 aa		4.11	□□□□□ -1.75
PHS1	YJL097W	LEO1	P38439	464 aa		4.11	□□□□□ -1.75
PHS1	YJL097W	ATG3	P40344	310 aa		4.11	□□□□□ -1.75
PHS1	YJL097W	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	4.11	□□□□□ -1.75	not detected
PHS1	YJL097W	MCM1	P11746	286 aa		4.1	□□□□□ -1.75
PHS1	YJL097W	SPT5	P27692	1063 aa	Known RBP	4.1	□□□□□ -1.75
PHS1	YJL097W	LRG1	P35688	1017 aa		4.1	□□□□□ -1.75
PHS1	YJL097W	AIM9	P40053	627 aa	Known RBP	4.1	□□□□□ -1.75
PHS1	YJL097W	TY1A-NL1	Q12391	440 aa	Known RBP	4.1	□□□□□ -1.75
PHS1	YJL097W	SPO74	P45819	413 aa		4.09	□□□□□ -1.75
PHS1	YJL097W	SKP1	P52286	194 aa		4.09	□□□□□ -1.75
PHS1	YJL097W	TY4B-P	A0A0B7P3V8	1104 aa		4.08	□□□□□ -1.76
PHS1	YJL097W	NTH2	P35172	780 aa		4.08	□□□□□ -1.76
PHS1	YJL097W	CUS1	Q02554	436 aa	Predicted RBP	4.08	□□□□□ -1.76
PHS1	YJL097W	TY4A-H	Q6Q5P6	413 aa		4.08	□□□□□ -1.76
PHS1	YJL097W	TED1	P40533	473 aa		4.07	□□□□□ -1.76
PHS1	YJL097W	YBL036C	P38197	257 aa		4.06	□□□□□ -1.76
PHS1	YJL097W	TAF1	P46677	1066 aa		4.06	□□□□□ -1.76
PHS1	YJL097W	GUA1	P38625	525 aa	Known RBP	4.05	□□□□□ -1.76
PHS1	YJL097W	APM2	P38700	605 aa		4.05	□□□□□ -1.76
PHS1	YJL097W	SDH1	Q00711	640 aa		4.04	□□□□□ -1.76
PHS1	YJL097W	ESC8	Q08119	714 aa		4.04	□□□□□ -1.76
PHS1	YJL097W	REC8	Q12188	680 aa		4.04	□□□□□ -1.76
PHS1	YJL097W	GIP2	P40036	548 aa		4.03	□□□□□ -1.76
PHS1	YJL097W	SLP1	Q12232	587 aa		4.03	□□□□□ -1.76
PHS1	YJL097W	IDI1	P15496	288 aa		4.02	□□□□□ -1.77
PHS1	YJL097W	KAP122	P32767	1081 aa		4.02	□□□□□ -1.77
PHS1	YJL097W	ENO2	P00925	437 aa	Known RBP	4.01	□□□□□ -1.77
PHS1	YJL097W	PDI1	P17967	522 aa	Known RBP	4.01	□□□□□ -1.77
PHS1	YJL097W	RDS2	P19541	446 aa	Known RBP	4.01	□□□□□ -1.77
PHS1	YJL097W	POL12	P38121	705 aa	Predicted RBP	4.01	□□□□□ -1.77
PHS1	YJL097W	BRL1	P38770	471 aa		4.01	□□□□□ -1.77
PHS1	YJL097W	YPP1	P46951	817 aa		4.01	□□□□□ -1.77
PHS1	YJL097W	HGH1	P48362	394 aa	Known RBP	4.01	□□□□□ -1.77
PHS1	YJL097W	SOK2	P53438	785 aa	Predicted RBP	4.01	□□□□□ -1.77
PHS1	YJL097W	NIT1	P40447	199 aa		4	□□□□□ -1.77
PHS1	YJL097W	GIP4	P39732	760 aa		3.99	□□□□□ -1.77
PHS1	YJL097W	YFL034W	P43564	1073 aa		3.99	□□□□□ -1.77
PHS1	YJL097W	SUP45	P12385	437 aa	Known RBP	3.98	□□□□□ -1.77
PHS1	YJL097W	BIO2	P32451	375 aa		3.98	□□□□□ -1.77
PHS1	YJL097W	DSE4	P53753	1117 aa		3.98	□□□□□ -1.77
PHS1	YJL097W	YNL108C	P53929	270 aa		3.98	□□□□□ -1.77
PHS1	YJL097W	CYT1	P07143	309 aa		3.97	□□□□□ -1.77
PHS1	YJL097W	RPC31	P17890	251 aa		3.97	□□□□□ -1.77
PHS1	YJL097W	MSB1	P21339	1137 aa	Known RBP	3.97	□□□□□ -1.77
PHS1	YJL097W	GAS1	P22146	559 aa	Known RBP	3.97	□□□□□ -1.77
PHS1	YJL097W	DFG16	Q99234	619 aa		3.97	□□□□□ -1.77
PHS1	YJL097W	ECL1	P48235	211 aa		3.96	□□□□□ -1.78
PHS1	YJL097W	ITC1	P53125	1264 aa		3.96	□□□□□ -1.78
PHS1	YJL097W	GCD1	P09032	578 aa	Predicted RBP	3.95	□□□□□ -1.78
PHS1	YJL097W	UTP4	Q06679	776 aa	Known RBP	3.95	□□□□□ -1.78
PHS1	YJL097W	RIM21	P48565	533 aa		3.94	□□□□□ -1.78
PHS1	YJL097W	PKC1	P24583	1151 aa		3.93	□□□□□ -1.78
PHS1	YJL097W	YHL008C	P38750	627 aa		3.93	□□□□□ -1.78
PHS1	YJL097W	TSC13	Q99190	310 aa		3.93	□□□□□ -1.78
PHS1	YJL097W	HXT5	P38695	592 aa		3.92	□□□□□ -1.78
PHS1	YJL097W	YER156C	P40093	338 aa	Known RBP	3.92	□□□□□ -1.78
PHS1	YJL097W	QDR2	P40474	542 aa		3.92	□□□□□ -1.78
PHS1	YJL097W	PRP43	P53131	767 aa	Known RBP	3.92	□□□□□ -1.78
PHS1	YJL097W	YJL181W	P46987	611 aa		3.91	□□□□□ -1.78
PHS1	YJL097W	YNR065C	P53751	1116 aa		3.91	□□□□□ -1.78
PHS1	YJL097W	SCD5	P34758	872 aa		3.9	□□□□□ -1.79
PHS1	YJL097W	THI80	P35202	319 aa		3.9	□□□□□ -1.79
PHS1	YJL097W	NCE103	P53615	221 aa		3.9	□□□□□ -1.79
PHS1	YJL097W	CDA2	Q06703	312 aa		3.9	□□□□□ -1.79
PHS1	YJL097W	PAN5	P38787	379 aa		3.89	□□□□□ -1.79
PHS1	YJL097W	TSA1	P34760	196 aa	Known RBP	3.88	□□□□□ -1.79
PHS1	YJL097W	DMA2	P53924	522 aa		3.88	□□□□□ -1.79
PHS1	YJL097W	YJL007C	P47080	104 aa		3.87	□□□□□ -1.79
PHS1	YJL097W	FLR1	P38124	548 aa		3.86	□□□□□ -1.79
PHS1	YJL097W	BIM1	P40013	344 aa		3.86	□□□□□ -1.79
PHS1	YJL097W	HDA2	Q06629	674 aa		3.86	□□□□□ -1.79
PHS1	YJL097W	TIF1	P10081	395 aa	Known RBP	3.84	□□□□□ -1.79
PHS1	YJL097W	MAE1	P36013	669 aa	Known RBP	3.84	□□□□□ -1.79
PHS1	YJL097W	SIS2	P36024	562 aa		3.84	□□□□□ -1.79
PHS1	YJL097W	BSD2	P38356	321 aa		3.84	□□□□□ -1.79
PHS1	YJL097W	POL5	P39985	1022 aa	Known RBP	3.84	□□□□□ -1.79
PHS1	YJL097W	ACS2	P52910	683 aa	Known RBP	3.84	□□□□□ -1.79
PHS1	YJL097W	MRX10	Q05648	414 aa		3.84	□□□□□ -1.79
PHS1	YJL097W	GIC2	Q06648	383 aa		3.84	□□□□□ -1.79
PHS1	YJL097W	YOR296W	Q08748	1289 aa		3.84	□□□□□ -1.79
PHS1	YJL097W	TAD3	Q9URQ3	322 aa		3.84	□□□□□ -1.79
PHS1	YJL097W	ATG32	P40458	529 aa		3.83	□□□□□ -1.8
PHS1	YJL097W	RPL34B	P40525	121 aa	Known RBP	3.83	□□□□□ -1.8
PHS1	YJL097W	PPT1	P53043	513 aa		3.83	□□□□□ -1.8
PHS1	YJL097W	RTG2	P32608	588 aa	Known RBP	3.82	□□□□□ -1.8
PHS1	YJL097W	HSP78	P33416	811 aa		3.82	□□□□□ -1.8
PHS1	YJL097W	ENO1	P00924	437 aa	Known RBP	3.81	□□□□□ -1.8
PHS1	YJL097W	UBP1	P25037	809 aa		3.81	□□□□□ -1.8
PHS1	YJL097W	INP51	P40559	946 aa	Known RBP	3.81	□□□□□ -1.8

Retrieved 100 of 5,963 RNA–protein pairs in 84.2 ms