RNA–Protein interactions for RNA: YJL080C

SCP160, Transcript of Essential RNA-binding G protein effector of mating response pathway, yeast

Gene SCP160, Length 3,669 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SCP160	YJL080C	PUS5	Q06244	254 aa		3.04	□□□□□ -1.92
SCP160	YJL080C	GSC2	P40989	1895 aa		3.04	□□□□□ -1.92
SCP160	YJL080C	SSA4	P22202	642 aa	Known RBP	3.04	□□□□□ -1.92
SCP160	YJL080C	CTI6	Q08923	506 aa		3.04	□□□□□ -1.92
SCP160	YJL080C	SER1	P33330	395 aa	Known RBP	3.04	□□□□□ -1.92
SCP160	YJL080C	BDF2	Q07442	638 aa		3.04	□□□□□ -1.92
SCP160	YJL080C	RPP1B	P10622	106 aa	Known RBP	3.03	□□□□□ -1.92
SCP160	YJL080C	ARG8	P18544	423 aa		3.03	□□□□□ -1.92
SCP160	YJL080C	SIT4	P20604	311 aa		3.03	□□□□□ -1.92
SCP160	YJL080C	SHC1	P39000	512 aa		3.03	□□□□□ -1.92
SCP160	YJL080C	MAM1	P40065	302 aa		3.03	□□□□□ -1.92
SCP160	YJL080C	YNR021W	P53723	404 aa	Known RBP	3.03	□□□□□ -1.92
SCP160	YJL080C	DPL1	Q05567	589 aa		3.03	□□□□□ -1.92
SCP160	YJL080C	IRC3	Q06683	689 aa		3.03	□□□□□ -1.92
SCP160	YJL080C	GRX6	Q12438	231 aa		3.03	□□□□□ -1.92
SCP160	YJL080C	RGR1	P19263	1082 aa		3.03	□□□□□ -1.93
SCP160	YJL080C	ESS1	P22696	170 aa		3.03	□□□□□ -1.93
SCP160	YJL080C	GCD11	P32481	527 aa	Known RBP	3.02	□□□□□ -1.93
SCP160	YJL080C	MVP1	P40959	511 aa	Known RBP	3.02	□□□□□ -1.93
SCP160	YJL080C	YGL082W	P53155	381 aa		3.02	□□□□□ -1.93
SCP160	YJL080C	UBP16	Q02863	499 aa		3.02	□□□□□ -1.93
SCP160	YJL080C	ATG20	Q07528	640 aa		3.02	□□□□□ -1.93
SCP160	YJL080C	YLR278C	Q05854	1341 aa		3.02	□□□□□ -1.93
SCP160	YJL080C	PRD1	P25375	712 aa		3.02	□□□□□ -1.93
SCP160	YJL080C	ORC6	P38826	435 aa		3.02	□□□□□ -1.93
SCP160	YJL080C	CSN12	P47130	423 aa		3.02	□□□□□ -1.93
SCP160	YJL080C	HAT1	Q12341	374 aa		3.01	□□□□□ -1.93
SCP160	YJL080C	SEC61	P32915	480 aa		3.01	□□□□□ -1.93
SCP160	YJL080C	RTR1	P40084	226 aa	Predicted RBP	3.01	□□□□□ -1.93
SCP160	YJL080C	ZDS1	P50111	915 aa	Known RBP	3.01	□□□□□ -1.93
SCP160	YJL080C	YPR204W	Q08995	1032 aa		3.01	□□□□□ -1.93
SCP160	YJL080C	KEX2	P13134	814 aa		3.01	□□□□□ -1.93
SCP160	YJL080C	RET1	P22276	1149 aa	Known RBP	3.01	□□□□□ -1.93
SCP160	YJL080C	RTG2	P32608	588 aa	Known RBP	3.01	□□□□□ -1.93
SCP160	YJL080C	SYF1	Q04048	859 aa	Predicted RBP	3.01	□□□□□ -1.93
SCP160	YJL080C	PKC1	P24583	1151 aa		3	□□□□□ -1.93
SCP160	YJL080C	ICL1	P28240	557 aa	Predicted RBP	3	□□□□□ -1.93
SCP160	YJL080C	YKU70	P32807	602 aa		3	□□□□□ -1.93
SCP160	YJL080C	NPL4	P33755	580 aa		3	□□□□□ -1.93
SCP160	YJL080C	NIS1	P53939	407 aa		3	□□□□□ -1.93
SCP160	YJL080C	PKH3	Q03306	898 aa	Predicted RBP	3	□□□□□ -1.93
SCP160	YJL080C	POM152	P39685	1337 aa		3	□□□□□ -1.93
SCP160	YJL080C	COQ4	O13525	335 aa		3	□□□□□ -1.93
SCP160	YJL080C	TOP1	P04786	769 aa		3	□□□□□ -1.93
SCP160	YJL080C	BRL1	P38770	471 aa		3	□□□□□ -1.93
SCP160	YJL080C	SNU71	P53207	620 aa	Known RBP	3	□□□□□ -1.93
SCP160	YJL080C	ERF2	Q06551	359 aa		3	□□□□□ -1.93
SCP160	YJL080C	BMT6	Q12291	365 aa		3	□□□□□ -1.93
SCP160	YJL080C	AIR2	Q12476	344 aa	Known RBP	3	□□□□□ -1.93
SCP160	YJL080C	RLF2	Q12495	606 aa		3	□□□□□ -1.93
SCP160	YJL080C	TOM1	Q03280	3268 aa		3	□□□□□ -1.93
SCP160	YJL080C	SLY41	P22215	453 aa		3	□□□□□ -1.93
SCP160	YJL080C	YJU3	P28321	313 aa		3	□□□□□ -1.93
SCP160	YJL080C	YJL007C	P47080	104 aa		3	□□□□□ -1.93
SCP160	YJL080C	YOL057W	Q08225	711 aa		3	□□□□□ -1.93
SCP160	YJL080C	SAC3	P46674	1301 aa		2.99	□□□□□ -1.93
SCP160	YJL080C	APL2	P36000	726 aa	Predicted RBP	2.99	□□□□□ -1.93
SCP160	YJL080C	YJR008W	P47085	338 aa		2.99	□□□□□ -1.93
SCP160	YJL080C	DNM1	P54861	757 aa		2.99	□□□□□ -1.93
SCP160	YJL080C	TFB3	Q03290	321 aa		2.99	□□□□□ -1.93
SCP160	YJL080C	YML020W	Q03722	664 aa		2.99	□□□□□ -1.93
SCP160	YJL080C	THS1	P04801	734 aa	Known RBP	2.99	□□□□□ -1.93
SCP160	YJL080C	NUD1	P32336	851 aa		2.99	□□□□□ -1.93
SCP160	YJL080C	GYP7	P48365	746 aa		2.99	□□□□□ -1.93
SCP160	YJL080C	SAS4	Q04003	481 aa		2.99	□□□□□ -1.93
SCP160	YJL080C	THI22	Q06490	572 aa		2.99	□□□□□ -1.93
SCP160	YJL080C	BMS1	Q08965	1183 aa	Known RBP	2.99	□□□□□ -1.93
SCP160	YJL080C	SWI1	P09547	1314 aa		2.99	□□□□□ -1.93
SCP160	YJL080C	YRB30	P53107	440 aa	Predicted RBP	2.99	□□□□□ -1.93
SCP160	YJL080C	UBX2	Q04228	584 aa		2.99	□□□□□ -1.93
SCP160	YJL080C	CSC1	Q06538	782 aa		2.99	□□□□□ -1.93
SCP160	YJL080C	HAP5	Q02516	242 aa		2.98	□□□□□ -1.93
SCP160	YJL080C	TIM50	Q02776	476 aa		2.98	□□□□□ -1.93
SCP160	YJL080C	YDR306C	Q06640	478 aa		2.98	□□□□□ -1.93
SCP160	YJL080C	ISU2	Q12056	156 aa		2.98	□□□□□ -1.93
SCP160	YJL080C	MSM1	P22438	575 aa		2.98	□□□□□ -1.93
SCP160	YJL080C	FRD1	P32614	470 aa	Known RBP	2.98	□□□□□ -1.93
SCP160	YJL080C	CST6	P40535	587 aa		2.98	□□□□□ -1.93
SCP160	YJL080C	HEF3	P53978	1044 aa	Known RBP	2.98	□□□□□ -1.93
SCP160	YJL080C	ZDS2	P54786	942 aa		2.98	□□□□□ -1.93
SCP160	YJL080C	VPS64	Q03944	604 aa		2.98	□□□□□ -1.93
SCP160	YJL080C	CAF20	P12962	161 aa	Known RBP	2.98	□□□□□ -1.93
SCP160	YJL080C	KTR1	P27810	393 aa	Known RBP	2.98	□□□□□ -1.93
SCP160	YJL080C	ETP1	P38748	585 aa	Known RBP	2.98	□□□□□ -1.93
SCP160	YJL080C	ISM1	P48526	1002 aa		2.98	□□□□□ -1.93
SCP160	YJL080C	RTT109	Q07794	436 aa		2.98	□□□□□ -1.93
SCP160	YJL080C	PSE1	P32337	1089 aa	Known RBP	2.97	□□□□□ -1.93
SCP160	YJL080C	FET4	P40988	552 aa		2.97	□□□□□ -1.93
SCP160	YJL080C	MMP1	Q12372	583 aa		2.97	□□□□□ -1.93
SCP160	YJL080C	DPH6	Q12429	685 aa		2.97	□□□□□ -1.93
SCP160	YJL080C	YIL089W	P40500	205 aa		2.96	□□□□□ -1.94
SCP160	YJL080C	MPP10	P47083	593 aa	Known RBP	2.96	□□□□□ -1.94
SCP160	YJL080C	DUS1	P53759	423 aa	Known RBP	2.96	□□□□□ -1.94
SCP160	YJL080C	SRT1	Q03175	343 aa		2.96	□□□□□ -1.94
SCP160	YJL080C	PKH1	Q03407	766 aa		2.96	□□□□□ -1.94
SCP160	YJL080C	RPP0	P05317	312 aa	Known RBP	2.96	□□□□□ -1.94
SCP160	YJL080C	MRP7	P12687	371 aa		2.96	□□□□□ -1.94
SCP160	YJL080C	SIS2	P36024	562 aa		2.96	□□□□□ -1.94
SCP160	YJL080C	PEA2	P40091	420 aa		2.96	□□□□□ -1.94
SCP160	YJL080C	EMP47	P43555	445 aa		2.96	□□□□□ -1.94

Retrieved 100 of 5,963 RNA–protein pairs in 15.6 ms