RNA–Protein interactions for RNA: YJL020C

BBC1, Transcript of Protein possibly involved in assembly of actin patches, yeast

Gene BBC1, Length 3,474 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
BBC1	YJL020C	MET4	P32389	672 aa		5.21	□□□□□ -1.57
BBC1	YJL020C	PEP12	P32854	288 aa		5.21	□□□□□ -1.57
BBC1	YJL020C	YJL049W	P47048	450 aa		5.21	□□□□□ -1.57
BBC1	YJL020C	TYS1	P36421	394 aa	Known RBP	5.21	□□□□□ -1.58
BBC1	YJL020C	FYV10	P40492	516 aa		5.21	□□□□□ -1.58
BBC1	YJL020C	YNL058C	P53947	316 aa		5.21	□□□□□ -1.58
BBC1	YJL020C	MRC1	P25588	1096 aa		5.21	□□□□□ -1.58
BBC1	YJL020C	SNF7	P39929	240 aa	Known RBP	5.21	□□□□□ -1.58
BBC1	YJL020C	VID27	P40157	782 aa		5.2	□□□□□ -1.58
BBC1	YJL020C	CWC15	Q03772	175 aa	Known RBP	5.2	□□□□□ -1.58
BBC1	YJL020C	FOB1	O13329	566 aa		5.2	□□□□□ -1.58
BBC1	YJL020C	SPT2	P06843	333 aa	Predicted RBP	5.2	□□□□□ -1.58
BBC1	YJL020C	YBL036C	P38197	257 aa		5.2	□□□□□ -1.58
BBC1	YJL020C	MTO1	P53070	669 aa		5.2	□□□□□ -1.58
BBC1	YJL020C	RRP9	Q06506	573 aa	Known RBP	5.2	□□□□□ -1.58
BBC1	YJL020C	PSR1	Q07800	427 aa		5.2	□□□□□ -1.58
BBC1	YJL020C	TAF5	P38129	798 aa		5.2	□□□□□ -1.58
BBC1	YJL020C	DJP1	P40564	432 aa		5.2	□□□□□ -1.58
BBC1	YJL020C	FAP1	P53971	965 aa		5.2	□□□□□ -1.58
BBC1	YJL020C	CDC45	Q08032	650 aa		5.2	□□□□□ -1.58
BBC1	YJL020C	ENO2	P00925	437 aa	Known RBP	5.19	□□□□□ -1.58
BBC1	YJL020C	HSC82	P15108	705 aa	Known RBP	5.19	□□□□□ -1.58
BBC1	YJL020C	MEP1	P40260	492 aa		5.19	□□□□□ -1.58
BBC1	YJL020C	RIM21	P48565	533 aa		5.19	□□□□□ -1.58
BBC1	YJL020C	ATG16	Q03818	150 aa		5.19	□□□□□ -1.58
BBC1	YJL020C	SPE2	P21182	396 aa		5.19	□□□□□ -1.58
BBC1	YJL020C	SWI3	P32591	825 aa		5.19	□□□□□ -1.58
BBC1	YJL020C	MAK10	Q02197	733 aa		5.19	□□□□□ -1.58
BBC1	YJL020C	IRC3	Q06683	689 aa		5.19	□□□□□ -1.58
BBC1	YJL020C	TYW1	Q08960	810 aa	Known RBP	5.18	□□□□□ -1.58
BBC1	YJL020C	HXT5	P38695	592 aa		5.18	□□□□□ -1.58
BBC1	YJL020C	DAK2	P43550	591 aa		5.18	□□□□□ -1.58
BBC1	YJL020C	BFA1	P47113	574 aa		5.18	□□□□□ -1.58
BBC1	YJL020C	FRT1	Q99332	602 aa		5.18	□□□□□ -1.58
BBC1	YJL020C	RPP0	P05317	312 aa	Known RBP	5.18	□□□□□ -1.58
BBC1	YJL020C	UTP14	Q04500	899 aa	Known RBP	5.18	□□□□□ -1.58
BBC1	YJL020C	YDR341C	Q05506	607 aa	Known RBP	5.18	□□□□□ -1.58
BBC1	YJL020C	RAD4	P14736	754 aa		5.17	□□□□□ -1.58
BBC1	YJL020C	DPB3	P27344	201 aa		5.17	□□□□□ -1.58
BBC1	YJL020C	CSE4	P36012	229 aa		5.17	□□□□□ -1.58
BBC1	YJL020C	TGL2	P54857	326 aa		5.17	□□□□□ -1.58
BBC1	YJL020C	PDS5	Q04264	1277 aa		5.17	□□□□□ -1.58
BBC1	YJL020C	RAD9	P14737	1309 aa		5.17	□□□□□ -1.58
BBC1	YJL020C	HSE1	P38753	452 aa		5.17	□□□□□ -1.58
BBC1	YJL020C	GPI8	P49018	411 aa		5.17	□□□□□ -1.58
BBC1	YJL020C	PRP3	Q03338	469 aa	Predicted RBP	5.17	□□□□□ -1.58
BBC1	YJL020C	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	5.17	□□□□□ -1.58	not detected
BBC1	YJL020C	SPO20	Q04359	397 aa		5.17	□□□□□ -1.58
BBC1	YJL020C	RTP1	Q12751	981 aa		5.17	□□□□□ -1.58
BBC1	YJL020C	RDS2	P19541	446 aa	Known RBP	5.17	□□□□□ -1.58
BBC1	YJL020C	SPT7	P35177	1332 aa		5.17	□□□□□ -1.58
BBC1	YJL020C	MET6	P05694	767 aa	Known RBP	5.16	□□□□□ -1.58
BBC1	YJL020C	TPM1	P17536	199 aa	Known RBP	5.16	□□□□□ -1.58
BBC1	YJL020C	MCM2	P29469	868 aa		5.16	□□□□□ -1.58
BBC1	YJL020C	EDS1	P38073	919 aa		5.16	□□□□□ -1.58
BBC1	YJL020C	FKH1	P40466	484 aa		5.16	□□□□□ -1.58
BBC1	YJL020C	SEC27	P41811	889 aa	Known RBP	5.16	□□□□□ -1.58
BBC1	YJL020C	YNR029C	P53729	429 aa	Known RBP	5.16	□□□□□ -1.58
BBC1	YJL020C	SLX4	Q12098	748 aa		5.16	□□□□□ -1.58
BBC1	YJL020C	MCM1	P11746	286 aa		5.16	□□□□□ -1.58
BBC1	YJL020C	MRM1	P25270	412 aa		5.16	□□□□□ -1.58
BBC1	YJL020C	PSE1	P32337	1089 aa	Known RBP	5.16	□□□□□ -1.58
BBC1	YJL020C	NPL4	P33755	580 aa		5.16	□□□□□ -1.58
BBC1	YJL020C	SEC9	P40357	651 aa		5.16	□□□□□ -1.58
BBC1	YJL020C	FPK1	P53739	893 aa		5.16	□□□□□ -1.58
BBC1	YJL020C	CDC53	Q12018	815 aa	Known RBP	5.16	□□□□□ -1.58
BBC1	YJL020C	DBP10	Q12389	995 aa	Known RBP	5.16	□□□□□ -1.58
BBC1	YJL020C	SNF2	P22082	1703 aa		5.16	□□□□□ -1.58
BBC1	YJL020C	MSH4	P40965	878 aa	Predicted RBP	5.16	□□□□□ -1.58
BBC1	YJL020C	PUF6	Q04373	656 aa	Known RBP	5.16	□□□□□ -1.58
BBC1	YJL020C	NUT2	Q06213	157 aa		5.16	□□□□□ -1.58
BBC1	YJL020C	RTG3	P38165	486 aa		5.15	□□□□□ -1.58
BBC1	YJL020C	TFC8	Q12308	588 aa		5.15	□□□□□ -1.58
BBC1	YJL020C	CLF1	Q12309	687 aa	Predicted RBP	5.15	□□□□□ -1.58
BBC1	YJL020C	ANP1	P32629	500 aa		5.15	□□□□□ -1.59
BBC1	YJL020C	NUP82	P40368	713 aa		5.15	□□□□□ -1.59
BBC1	YJL020C	RCF1	Q03713	159 aa		5.15	□□□□□ -1.59
BBC1	YJL020C	HSP42	Q12329	375 aa		5.15	□□□□□ -1.59
BBC1	YJL020C	APC1	P53886	1748 aa		5.14	□□□□□ -1.59
BBC1	YJL020C	GRS1	P38088	690 aa	Known RBP	5.14	□□□□□ -1.59
BBC1	YJL020C	TIM11	P81449	96 aa	Predicted RBP	5.14	□□□□□ -1.59
BBC1	YJL020C	USO1	P25386	1790 aa		5.14	□□□□□ -1.59
BBC1	YJL020C	CYB2	P00175	591 aa		5.14	□□□□□ -1.59
BBC1	YJL020C	ATP4	P05626	244 aa		5.14	□□□□□ -1.59
BBC1	YJL020C	BRF1	P29056	596 aa		5.14	□□□□□ -1.59
BBC1	YJL020C	BOL3	P39724	118 aa		5.14	□□□□□ -1.59
BBC1	YJL020C	TAF8	Q03750	510 aa		5.14	□□□□□ -1.59
BBC1	YJL020C	KAR5	Q04746	504 aa		5.14	□□□□□ -1.59
BBC1	YJL020C	GRC3	Q07845	632 aa		5.14	□□□□□ -1.59
BBC1	YJL020C	NSR1	P27476	414 aa	Known RBP RIP-Chip data	5.14	□□□□□ -1.59	not detected
BBC1	YJL020C	ECM32	P32644	1121 aa	Known RBP	5.14	□□□□□ -1.59
BBC1	YJL020C	CRP1	P38845	465 aa	Known RBP	5.14	□□□□□ -1.59
BBC1	YJL020C	HOL1	P53389	586 aa		5.14	□□□□□ -1.59
BBC1	YJL020C	STO1	P34160	861 aa	Known RBP	5.13	□□□□□ -1.59
BBC1	YJL020C	YHR020W	P38708	688 aa	Known RBP	5.13	□□□□□ -1.59
BBC1	YJL020C	APE4	P38821	490 aa		5.13	□□□□□ -1.59
BBC1	YJL020C	SPR28	Q04921	423 aa		5.13	□□□□□ -1.59
BBC1	YJL020C	MGE1	P38523	228 aa		5.13	□□□□□ -1.59
BBC1	YJL020C	YHR218W	P38899	603 aa		5.13	□□□□□ -1.59
BBC1	YJL020C	MTR4	P47047	1073 aa	Known RBP	5.13	□□□□□ -1.59

Retrieved 100 of 5,963 RNA–protein pairs in 16.8 ms