RNA–Protein interactions for RNA: YIL126W

STH1, Transcript of ATPase component of the RSC chromatin remodeling complex, yeast

Gene STH1, Length 4,080 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
STH1	YIL126W	RAD4	P14736	754 aa		2.54	□□□□□ -2
STH1	YIL126W	VMA1	P17255	1071 aa	Known RBP	2.54	□□□□□ -2
STH1	YIL126W	CSM2	P40465	213 aa		2.54	□□□□□ -2
STH1	YIL126W	OYE3	P41816	400 aa	Predicted RBP	2.54	□□□□□ -2
STH1	YIL126W	CIT3	P43635	486 aa		2.54	□□□□□ -2
STH1	YIL126W	HIF1	Q12373	385 aa		2.54	□□□□□ -2
STH1	YIL126W	PKC1	P24583	1151 aa		2.54	□□□□□ -2
STH1	YIL126W	ALT2	P52892	507 aa		2.54	□□□□□ -2
STH1	YIL126W	TUM1	Q08686	304 aa	Known RBP	2.54	□□□□□ -2
STH1	YIL126W	YLR419W	Q06698	1435 aa	Known RBP	2.54	□□□□□ -2
STH1	YIL126W	HSC82	P15108	705 aa	Known RBP	2.54	□□□□□ -2
STH1	YIL126W	AFT1	P22149	690 aa		2.54	□□□□□ -2
STH1	YIL126W	PSF2	P40359	213 aa		2.54	□□□□□ -2
STH1	YIL126W	TPM2	P40414	161 aa		2.54	□□□□□ -2
STH1	YIL126W	SPR3	P41901	512 aa		2.54	□□□□□ -2
STH1	YIL126W	SKY1	Q03656	742 aa		2.54	□□□□□ -2
STH1	YIL126W	CFT2	Q12102	859 aa	Predicted RBP	2.54	□□□□□ -2
STH1	YIL126W	NCB2	Q92317	146 aa		2.54	□□□□□ -2
STH1	YIL126W	NUP188	P52593	1655 aa	Known RBP	2.54	□□□□□ -2
STH1	YIL126W	BRN1	P38170	754 aa		2.53	□□□□□ -2
STH1	YIL126W	ITC1	P53125	1264 aa		2.53	□□□□□ -2
STH1	YIL126W	SAM3	Q08986	587 aa		2.53	□□□□□ -2
STH1	YIL126W	SES1	P07284	462 aa	Known RBP	2.53	□□□□□ -2
STH1	YIL126W	LPD1	P09624	499 aa	Known RBP	2.53	□□□□□ -2
STH1	YIL126W	COQ8	P27697	501 aa		2.53	□□□□□ -2
STH1	YIL126W	YMR124W	P39523	943 aa	Known RBP	2.53	□□□□□ -2
STH1	YIL126W	TAN1	P53072	289 aa	Predicted RBP	2.53	□□□□□ -2
STH1	YIL126W	CTR9	P89105	1077 aa		2.53	□□□□□ -2
STH1	YIL126W	VPS72	Q03388	795 aa		2.53	□□□□□ -2
STH1	YIL126W	IML1	P47170	1584 aa		2.53	□□□□□ -2
STH1	YIL126W	POL30	P15873	258 aa	Known RBP	2.53	□□□□□ -2
STH1	YIL126W	YKL023W	P36103	277 aa	Known RBP	2.53	□□□□□ -2
STH1	YIL126W	SET1	P38827	1080 aa	Known RBP	2.53	□□□□□ -2
STH1	YIL126W	SNF7	P39929	240 aa	Known RBP	2.53	□□□□□ -2
STH1	YIL126W	MPP10	P47083	593 aa	Known RBP	2.53	□□□□□ -2
STH1	YIL126W	YNR014W	P53719	212 aa		2.53	□□□□□ -2
STH1	YIL126W	APP1	P53933	587 aa		2.53	□□□□□ -2
STH1	YIL126W	IMP4	P53941	290 aa	Known RBP	2.53	□□□□□ -2
STH1	YIL126W	USO1	P25386	1790 aa		2.53	□□□□□ -2.01
STH1	YIL126W	PUP2	P32379	260 aa		2.52	□□□□□ -2.01
STH1	YIL126W	TYS1	P36421	394 aa	Known RBP	2.52	□□□□□ -2.01
STH1	YIL126W	PFF1	P38244	976 aa		2.52	□□□□□ -2.01
STH1	YIL126W	LAM1	P38851	1228 aa		2.52	□□□□□ -2.01
STH1	YIL126W	RRG1	Q12167	365 aa	Predicted RBP	2.52	□□□□□ -2.01
STH1	YIL126W	MNL2	Q12205	849 aa		2.52	□□□□□ -2.01
STH1	YIL126W	SNU66	Q12420	587 aa	Predicted RBP	2.52	□□□□□ -2.01
STH1	YIL126W	YRF1-2	P40105	1681 aa		2.52	□□□□□ -2.01
STH1	YIL126W	THS1	P04801	734 aa	Known RBP	2.52	□□□□□ -2.01
STH1	YIL126W	RXT2	P38255	430 aa		2.52	□□□□□ -2.01
STH1	YIL126W	SHC1	P39000	512 aa		2.52	□□□□□ -2.01
STH1	YIL126W	JJJ2	P46997	583 aa		2.52	□□□□□ -2.01
STH1	YIL126W	YJR107W	P47145	328 aa		2.52	□□□□□ -2.01
STH1	YIL126W	HEH2	Q03281	663 aa		2.52	□□□□□ -2.01
STH1	YIL126W	SRC1	Q03707	834 aa		2.52	□□□□□ -2.01
STH1	YIL126W	YLR326W	Q06170	240 aa	Known RBP	2.52	□□□□□ -2.01
STH1	YIL126W	BDF2	Q07442	638 aa		2.52	□□□□□ -2.01
STH1	YIL126W	BI4	P03879	638 aa		2.52	□□□□□ -2.01
STH1	YIL126W	RET1	P22276	1149 aa	Known RBP	2.52	□□□□□ -2.01
STH1	YIL126W	CPS1	P27614	576 aa		2.52	□□□□□ -2.01
STH1	YIL126W	ZUO1	P32527	433 aa	Known RBP	2.52	□□□□□ -2.01
STH1	YIL126W	SMC1	P32908	1225 aa		2.52	□□□□□ -2.01
STH1	YIL126W	DSF2	P38213	736 aa		2.52	□□□□□ -2.01
STH1	YIL126W	MUM2	P38236	366 aa		2.52	□□□□□ -2.01
STH1	YIL126W	TOM71	P38825	639 aa	Known RBP	2.52	□□□□□ -2.01
STH1	YIL126W	SPO71	Q03868	1245 aa		2.52	□□□□□ -2.01
STH1	YIL126W	WSC3	Q12215	556 aa		2.52	□□□□□ -2.01
STH1	YIL126W	MAM3	Q12296	706 aa		2.52	□□□□□ -2.01
STH1	YIL126W	GLE1	Q12315	538 aa		2.52	□□□□□ -2.01
STH1	YIL126W	JIP3	O13555	125 aa		2.52	□□□□□ -2.01
STH1	YIL126W	MFT1	P33441	392 aa	Known RBP	2.52	□□□□□ -2.01
STH1	YIL126W	YGL081W	P53156	320 aa		2.52	□□□□□ -2.01
STH1	YIL126W	JJJ1	P53863	590 aa		2.52	□□□□□ -2.01
STH1	YIL126W	ACK1	Q07622	623 aa	Predicted RBP	2.52	□□□□□ -2.01
STH1	YIL126W	YPR204W	Q08995	1032 aa		2.52	□□□□□ -2.01
STH1	YIL126W	OSH2	Q12451	1283 aa		2.52	□□□□□ -2.01
STH1	YIL126W	YBT1	P32386	1661 aa		2.52	□□□□□ -2.01
STH1	YIL126W	CAT8	P39113	1433 aa		2.51	□□□□□ -2.01
STH1	YIL126W	SPE2	P21182	396 aa		2.51	□□□□□ -2.01
STH1	YIL126W	VPS35	P34110	944 aa		2.51	□□□□□ -2.01
STH1	YIL126W	EAP1	P36041	632 aa	Known RBP	2.51	□□□□□ -2.01
STH1	YIL126W	HOS4	P40480	1083 aa		2.51	□□□□□ -2.01
STH1	YIL126W	XKS1	P42826	600 aa		2.51	□□□□□ -2.01
STH1	YIL126W	ARP5	P53946	755 aa		2.51	□□□□□ -2.01
STH1	YIL126W	TLG1	Q03322	224 aa		2.51	□□□□□ -2.01
STH1	YIL126W	NHA1	Q99271	985 aa		2.51	□□□□□ -2.01
STH1	YIL126W	SNA3	P14359	133 aa		2.51	□□□□□ -2.01
STH1	YIL126W	SLD2	P34252	453 aa		2.51	□□□□□ -2.01
STH1	YIL126W	GDT1	P38301	280 aa	Predicted RBP	2.51	□□□□□ -2.01
STH1	YIL126W	VNX1	P42839	908 aa		2.51	□□□□□ -2.01
STH1	YIL126W	RMD1	Q03441	430 aa		2.51	□□□□□ -2.01
STH1	YIL126W	RBA50	Q04418	439 aa		2.51	□□□□□ -2.01
STH1	YIL126W	EIS1	Q05050	843 aa	Known RBP	2.51	□□□□□ -2.01
STH1	YIL126W	JIP5	Q06214	492 aa	Predicted RBP	2.51	□□□□□ -2.01
STH1	YIL126W	SUB2	Q07478	446 aa	Known RBP	2.51	□□□□□ -2.01
STH1	YIL126W	CLF1	Q12309	687 aa	Predicted RBP	2.51	□□□□□ -2.01
STH1	YIL126W	RAD2	P07276	1031 aa		2.51	□□□□□ -2.01
STH1	YIL126W	SRS2	P12954	1174 aa		2.51	□□□□□ -2.01
STH1	YIL126W	SEC14	P24280	304 aa	Known RBP	2.51	□□□□□ -2.01
STH1	YIL126W	SEC8	P32855	1065 aa		2.51	□□□□□ -2.01
STH1	YIL126W	PTC3	P34221	468 aa	Known RBP	2.51	□□□□□ -2.01

Retrieved 100 of 5,963 RNA–protein pairs in 58.6 ms