RNA–Protein interactions for RNA: YHR050W

SMF2, Transcript of Divalent metal ion transporter involved in manganese homeostasis, yeast

Gene SMF2, Length 1,650 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SMF2	YHR050W	PTC3	P34221	468 aa	Known RBP	6.65	□□□□□ -1.34
SMF2	YHR050W	YKR075C	P36155	307 aa		6.65	□□□□□ -1.34
SMF2	YHR050W	MRPS35	P53292	345 aa		6.65	□□□□□ -1.34
SMF2	YHR050W	CTR9	P89105	1077 aa		6.65	□□□□□ -1.34
SMF2	YHR050W	LAM6	Q08001	693 aa		6.65	□□□□□ -1.34
SMF2	YHR050W	AAP1	P37898	856 aa	Known RBP	6.65	□□□□□ -1.35
SMF2	YHR050W	KRI1	P42846	591 aa	Known RBP	6.65	□□□□□ -1.35
SMF2	YHR050W	HXT10	P43581	546 aa		6.65	□□□□□ -1.35
SMF2	YHR050W	ULI1	P43604	169 aa		6.65	□□□□□ -1.35
SMF2	YHR050W	NPA3	P47122	385 aa		6.65	□□□□□ -1.35
SMF2	YHR050W	ALO1	P54783	526 aa	Known RBP	6.65	□□□□□ -1.35
SMF2	YHR050W	HAP5	Q02516	242 aa		6.65	□□□□□ -1.35
SMF2	YHR050W	VPS20	Q04272	221 aa		6.65	□□□□□ -1.35
SMF2	YHR050W	IOC2	Q12072	812 aa		6.65	□□□□□ -1.35
SMF2	YHR050W	KTR1	P27810	393 aa	Known RBP	6.64	□□□□□ -1.35
SMF2	YHR050W	SER1	P33330	395 aa	Known RBP	6.64	□□□□□ -1.35
SMF2	YHR050W	BDH2	P39713	417 aa		6.64	□□□□□ -1.35
SMF2	YHR050W	YGL082W	P53155	381 aa		6.64	□□□□□ -1.35
SMF2	YHR050W	FCP1	Q03254	732 aa		6.64	□□□□□ -1.35
SMF2	YHR050W	GYP5	Q12344	894 aa		6.64	□□□□□ -1.35
SMF2	YHR050W	KTR3	P38130	404 aa	Predicted RBP	6.63	□□□□□ -1.35
SMF2	YHR050W	SNU66	Q12420	587 aa	Predicted RBP	6.63	□□□□□ -1.35
SMF2	YHR050W	BIK1	P11709	440 aa		6.62	□□□□□ -1.35
SMF2	YHR050W	TPM1	P17536	199 aa	Known RBP	6.62	□□□□□ -1.35
SMF2	YHR050W	SLA1	P32790	1244 aa		6.62	□□□□□ -1.35
SMF2	YHR050W	PRP40	P33203	583 aa	Known RBP	6.62	□□□□□ -1.35
SMF2	YHR050W	HST1	P53685	503 aa		6.62	□□□□□ -1.35
SMF2	YHR050W	UTP10	P42945	1769 aa	Known RBP	6.62	□□□□□ -1.35
SMF2	YHR050W	STM1	P39015	273 aa	Known RBP	6.61	□□□□□ -1.35
SMF2	YHR050W	HRQ1	Q05549	1077 aa		6.61	□□□□□ -1.35
SMF2	YHR050W	NOP58	Q12499	511 aa	Known RBP	6.61	□□□□□ -1.35
SMF2	YHR050W	QCR6	P00127	147 aa		6.61	□□□□□ -1.35
SMF2	YHR050W	SIS2	P36024	562 aa		6.61	□□□□□ -1.35
SMF2	YHR050W	AIM9	P40053	627 aa	Known RBP	6.61	□□□□□ -1.35
SMF2	YHR050W	SPO22	P40511	975 aa		6.61	□□□□□ -1.35
SMF2	YHR050W	YJL181W	P46987	611 aa		6.61	□□□□□ -1.35
SMF2	YHR050W	NYV1	Q12255	253 aa		6.61	□□□□□ -1.35
SMF2	YHR050W	SEC18	P18759	758 aa	Known RBP	6.6	□□□□□ -1.35
SMF2	YHR050W	SSK22	P25390	1331 aa	Predicted RBP	6.6	□□□□□ -1.35
SMF2	YHR050W	EAP1	P36041	632 aa	Known RBP	6.6	□□□□□ -1.35
SMF2	YHR050W	DCW1	P36091	449 aa		6.6	□□□□□ -1.35
SMF2	YHR050W	OSH3	P38713	996 aa	Known RBP	6.6	□□□□□ -1.35
SMF2	YHR050W	HYR1	P40581	163 aa	Known RBP	6.6	□□□□□ -1.35
SMF2	YHR050W	SAC3	P46674	1301 aa		6.6	□□□□□ -1.35
SMF2	YHR050W	YGL081W	P53156	320 aa		6.6	□□□□□ -1.35
SMF2	YHR050W	PIB2	P53191	635 aa		6.6	□□□□□ -1.35
SMF2	YHR050W	PIL1	P53252	339 aa	Known RBP	6.6	□□□□□ -1.35
SMF2	YHR050W	LCD1	Q04377	747 aa		6.6	□□□□□ -1.35
SMF2	YHR050W	GRE2	Q12068	342 aa	Known RBP	6.6	□□□□□ -1.35
SMF2	YHR050W	RPL19A	P0CX82	189 aa	Known RBP	6.59	□□□□□ -1.35
SMF2	YHR050W	RPL19B	P0CX83	189 aa	Predicted RBP	6.59	□□□□□ -1.35
SMF2	YHR050W	PBY1	P38254	753 aa		6.59	□□□□□ -1.35
SMF2	YHR050W	CIR1	P42940	261 aa		6.59	□□□□□ -1.35
SMF2	YHR050W	HAT1	Q12341	374 aa		6.59	□□□□□ -1.35
SMF2	YHR050W	KEX1	P09620	729 aa		6.58	□□□□□ -1.36
SMF2	YHR050W	RSM25	P40496	264 aa		6.58	□□□□□ -1.36
SMF2	YHR050W	RPN11	P43588	306 aa	Known RBP	6.58	□□□□□ -1.36
SMF2	YHR050W	UBP16	Q02863	499 aa		6.58	□□□□□ -1.36
SMF2	YHR050W	LDB19	Q12502	818 aa		6.58	□□□□□ -1.36
SMF2	YHR050W	OPI1	P21957	404 aa		6.58	□□□□□ -1.36
SMF2	YHR050W	RPN7	Q06103	429 aa	Known RBP	6.58	□□□□□ -1.36
SMF2	YHR050W	ADR1	P07248	1323 aa		6.57	□□□□□ -1.36
SMF2	YHR050W	TTI1	P36097	1038 aa		6.57	□□□□□ -1.36
SMF2	YHR050W	PEX14	P53112	341 aa		6.57	□□□□□ -1.36
SMF2	YHR050W	YNL193W	P53870	558 aa		6.57	□□□□□ -1.36
SMF2	YHR050W	AIM44	Q99299	758 aa		6.57	□□□□□ -1.36
SMF2	YHR050W	GUT1	P32190	709 aa		6.56	□□□□□ -1.36
SMF2	YHR050W	RPN12	P32496	274 aa		6.56	□□□□□ -1.36
SMF2	YHR050W	RSC1	P53236	928 aa		6.56	□□□□□ -1.36
SMF2	YHR050W	RRI2	Q12348	645 aa		6.56	□□□□□ -1.36
SMF2	YHR050W	PRX1	P34227	261 aa	Known RBP	6.55	□□□□□ -1.36
SMF2	YHR050W	RVS167	P39743	482 aa	Known RBP	6.55	□□□□□ -1.36
SMF2	YHR050W	ATH1	P48016	1211 aa		6.55	□□□□□ -1.36
SMF2	YHR050W	CTF18	P49956	741 aa		6.55	□□□□□ -1.36
SMF2	YHR050W	CWH41	P53008	833 aa		6.55	□□□□□ -1.36
SMF2	YHR050W	ARP5	P53946	755 aa		6.55	□□□□□ -1.36
SMF2	YHR050W	PSK2	Q08217	1101 aa		6.55	□□□□□ -1.36
SMF2	YHR050W	HTA1	P04911	132 aa	Known RBP	6.55	□□□□□ -1.36
SMF2	YHR050W	HTA2	P04912	132 aa		6.55	□□□□□ -1.36
SMF2	YHR050W	PIF1	P07271	859 aa		6.55	□□□□□ -1.36
SMF2	YHR050W	CIC1	P38779	376 aa	Known RBP	6.55	□□□□□ -1.36
SMF2	YHR050W	SOL3	P38858	249 aa		6.55	□□□□□ -1.36
SMF2	YHR050W	RAT1	Q02792	1006 aa	Known RBP	6.55	□□□□□ -1.36
SMF2	YHR050W	PEX19	Q07418	342 aa		6.55	□□□□□ -1.36
SMF2	YHR050W	APC11	Q12157	165 aa		6.55	□□□□□ -1.36
SMF2	YHR050W	BUG1	Q12191	341 aa		6.55	□□□□□ -1.36
SMF2	YHR050W	ELM1	P32801	640 aa		6.54	□□□□□ -1.36
SMF2	YHR050W	RKM3	P38222	552 aa		6.54	□□□□□ -1.36
SMF2	YHR050W	NPR2	P39923	615 aa		6.54	□□□□□ -1.36
SMF2	YHR050W	VID28	P40547	921 aa		6.54	□□□□□ -1.36
SMF2	YHR050W	ENP2	P48234	707 aa	Known RBP	6.54	□□□□□ -1.36
SMF2	YHR050W	KRE33	P53914	1056 aa	Known RBP	6.54	□□□□□ -1.36
SMF2	YHR050W	ETT1	Q08421	412 aa	Known RBP	6.54	□□□□□ -1.36
SMF2	YHR050W	POM152	P39685	1337 aa		6.53	□□□□□ -1.36
SMF2	YHR050W	YHL017W	P38745	532 aa		6.53	□□□□□ -1.36
SMF2	YHR050W	CCT5	P40413	562 aa	Known RBP	6.53	□□□□□ -1.36
SMF2	YHR050W	YKE2	P52553	114 aa		6.53	□□□□□ -1.36
SMF2	YHR050W	ESF1	Q06344	628 aa	Known RBP	6.53	□□□□□ -1.36
SMF2	YHR050W	DIB1	Q06819	143 aa	Predicted RBP	6.53	□□□□□ -1.36
SMF2	YHR050W	ELG1	Q12050	791 aa		6.53	□□□□□ -1.36

Retrieved 100 of 5,963 RNA–protein pairs in 238.3 ms