RNA–Protein interactions for RNA: YGL244W

RTF1, Transcript of Subunit of RNAPII-associated chromatin remodeling Paf1 complex, yeastyeast

Gene RTF1, Length 1,677 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTF1YGL244W VMS1Q04311 632 aaKnown RBP13.06□□□□□ -0.32
RTF1YGL244W MATALPHA2P0CY08 210 aa13.05□□□□□ -0.32
RTF1YGL244W HMLALPHA2P0CY09 210 aa13.05□□□□□ -0.32
RTF1YGL244W CTH1P47976 325 aa13.05□□□□□ -0.32
RTF1YGL244W OSH3P38713 996 aaKnown RBP13.05□□□□□ -0.32
RTF1YGL244W EPS1P40557 701 aa13.05□□□□□ -0.32
RTF1YGL244W BUD6P41697 788 aa13.05□□□□□ -0.32
RTF1YGL244W TFG2P41896 400 aaPredicted RBP13.05□□□□□ -0.32
RTF1YGL244W MSB4Q12317 492 aa13.05□□□□□ -0.32
RTF1YGL244W SSK22P25390 1331 aaPredicted RBP13.05□□□□□ -0.32
RTF1YGL244W RSF2P46974 1380 aa13.04□□□□□ -0.32
RTF1YGL244W FBP26P32604 452 aa13.04□□□□□ -0.32
RTF1YGL244W FYV10P40492 516 aa13.04□□□□□ -0.32
RTF1YGL244W BBC1P47068 1157 aa13.04□□□□□ -0.32
RTF1YGL244W ADE16P54113 591 aaKnown RBP13.04□□□□□ -0.32
RTF1YGL244W APL2P36000 726 aaPredicted RBP13.03□□□□□ -0.32
RTF1YGL244W YLR271WQ06152 274 aa13.03□□□□□ -0.32
RTF1YGL244W PSH1Q12161 406 aa13.03□□□□□ -0.32
RTF1YGL244W MRC1P25588 1096 aa13.02□□□□□ -0.32
RTF1YGL244W GSY2P27472 705 aa13.02□□□□□ -0.32
RTF1YGL244W WAR1Q03631 944 aa13.02□□□□□ -0.32
RTF1YGL244W GYP5Q12344 894 aa13.02□□□□□ -0.32
RTF1YGL244W SUP35P05453 685 aaKnown RBP13.02□□□□□ -0.33
RTF1YGL244W PET111P08468 800 aa13.02□□□□□ -0.33
RTF1YGL244W SPC110P32380 944 aa13.02□□□□□ -0.33
RTF1YGL244W RFT1P38206 574 aaPredicted RBP13.02□□□□□ -0.33
RTF1YGL244W YBP2P53169 641 aa13.02□□□□□ -0.33
RTF1YGL244W PKH1Q03407 766 aa13.02□□□□□ -0.33
RTF1YGL244W SSP2Q08646 371 aa13.02□□□□□ -0.33
RTF1YGL244W PEP3P27801 918 aa13.01□□□□□ -0.33
RTF1YGL244W SRP40P32583 406 aaPredicted RBP13.01□□□□□ -0.33
RTF1YGL244W YKT6P36015 200 aaKnown RBP13.01□□□□□ -0.33
RTF1YGL244W NOC2P39744 710 aaKnown RBP13.01□□□□□ -0.33
RTF1YGL244W YLR407WQ06070 228 aa13.01□□□□□ -0.33
RTF1YGL244W COG4Q06096 861 aa13.01□□□□□ -0.33
RTF1YGL244W YPR204WQ08995 1032 aa13.01□□□□□ -0.33
RTF1YGL244W NOP14Q99207 810 aaKnown RBP13.01□□□□□ -0.33
RTF1YGL244W OPI1P21957 404 aa13□□□□□ -0.33
RTF1YGL244W MTC5Q03897 1148 aa13□□□□□ -0.33
RTF1YGL244W ESF1Q06344 628 aaKnown RBP13□□□□□ -0.33
RTF1YGL244W NOP53Q12080 455 aaKnown RBP13□□□□□ -0.33
RTF1YGL244W PRP31P49704 494 aaPredicted RBP12.99□□□□□ -0.33
RTF1YGL244W UTP13Q05946 817 aaKnown RBP12.99□□□□□ -0.33
RTF1YGL244W SPB4P25808 606 aaPredicted RBP12.99□□□□□ -0.33
RTF1YGL244W ATG13Q06628 738 aa12.99□□□□□ -0.33
RTF1YGL244W CTI6Q08923 506 aa12.99□□□□□ -0.33
RTF1YGL244W TFC8Q12308 588 aa12.99□□□□□ -0.33
RTF1YGL244W AI2P03876 854 aa12.98□□□□□ -0.33
RTF1YGL244W PGI1P12709 554 aaKnown RBP12.98□□□□□ -0.33
RTF1YGL244W IMP2'P32351 346 aa12.98□□□□□ -0.33
RTF1YGL244W SRC1Q03707 834 aa12.98□□□□□ -0.33
RTF1YGL244W OSW7P43611 510 aa12.97□□□□□ -0.33
RTF1YGL244W ECM23Q02710 187 aa12.97□□□□□ -0.33
RTF1YGL244W YGL082WP53155 381 aa12.96□□□□□ -0.33
RTF1YGL244W SEC18P18759 758 aaKnown RBP12.96□□□□□ -0.34
RTF1YGL244W UBP10P53874 792 aaPredicted RBP12.96□□□□□ -0.34
RTF1YGL244W FCP1Q03254 732 aa12.96□□□□□ -0.34
RTF1YGL244W RPN7Q06103 429 aaKnown RBP12.96□□□□□ -0.34
RTF1YGL244W YCG1Q06680 1035 aa12.96□□□□□ -0.34
RTF1YGL244W DEP1P31385 405 aa12.95□□□□□ -0.34
RTF1YGL244W ISW2Q08773 1120 aa12.95□□□□□ -0.34
RTF1YGL244W SNU66Q12420 587 aaPredicted RBP12.95□□□□□ -0.34
RTF1YGL244W PET123P17558 318 aa12.93□□□□□ -0.34
RTF1YGL244W ARG8P18544 423 aa12.93□□□□□ -0.34
RTF1YGL244W CLB5P30283 435 aa12.93□□□□□ -0.34
RTF1YGL244W PTP3P40048 928 aa12.93□□□□□ -0.34
RTF1YGL244W VPS75P53853 264 aa12.93□□□□□ -0.34
RTF1YGL244W YNL193WP53870 558 aa12.93□□□□□ -0.34
RTF1YGL244W FRK1Q03002 865 aaPredicted RBP12.93□□□□□ -0.34
RTF1YGL244W UTP10P42945 1769 aaKnown RBP12.93□□□□□ -0.34
RTF1YGL244W CLB1P24868 471 aa12.93□□□□□ -0.34
RTF1YGL244W EPL1P43572 832 aa12.93□□□□□ -0.34
RTF1YGL244W CDC15P27636 974 aa12.92□□□□□ -0.34
RTF1YGL244W PSY4P38193 441 aa12.92□□□□□ -0.34
RTF1YGL244W APL4Q12028 832 aa12.92□□□□□ -0.34
RTF1YGL244W HSP82P02829 709 aaKnown RBP12.91□□□□□ -0.34
RTF1YGL244W HXK1P04806 485 aaKnown RBP12.91□□□□□ -0.34
RTF1YGL244W DIT2P21595 489 aa12.91□□□□□ -0.34
RTF1YGL244W MCM4P30665 933 aaKnown RBP12.91□□□□□ -0.34
RTF1YGL244W SKI2P35207 1287 aaKnown RBP RIP-Chip data12.91□□□□□ -0.34not detected
RTF1YGL244W UBP16Q02863 499 aa12.91□□□□□ -0.34
RTF1YGL244W GIN4Q12263 1142 aa12.91□□□□□ -0.34
RTF1YGL244W LAM4P38800 1345 aa12.91□□□□□ -0.34
RTF1YGL244W YRF1-3P0CX14 1859 aa12.9□□□□□ -0.34
RTF1YGL244W YRF1-7P0CX15 1859 aa12.9□□□□□ -0.34
RTF1YGL244W YRF1-6P53819 1859 aa12.9□□□□□ -0.34
RTF1YGL244W RGP1P16664 663 aa12.9□□□□□ -0.34
RTF1YGL244W PCH2P38126 564 aa12.9□□□□□ -0.34
RTF1YGL244W YMR147WP40218 223 aaKnown RBP12.9□□□□□ -0.34
RTF1YGL244W MSH4P40965 878 aaPredicted RBP12.9□□□□□ -0.34
RTF1YGL244W SSF2Q12153 453 aaPredicted RBP12.9□□□□□ -0.34
RTF1YGL244W YKL068W-AQ3E826 78 aa12.9□□□□□ -0.34
RTF1YGL244W STE11P23561 717 aa12.89□□□□□ -0.35
RTF1YGL244W STR2P47164 639 aa12.89□□□□□ -0.35
RTF1YGL244W MRS2Q01926 470 aa12.89□□□□□ -0.35
RTF1YGL244W RNT1Q02555 471 aa12.89□□□□□ -0.35
RTF1YGL244W PKH3Q03306 898 aaPredicted RBP12.89□□□□□ -0.35
RTF1YGL244W TLG2Q08144 397 aa12.89□□□□□ -0.35
RTF1YGL244W TUM1Q08686 304 aaKnown RBP12.89□□□□□ -0.35
RTF1YGL244W RPL22AP05749 121 aaKnown RBP12.88□□□□□ -0.35
Retrieved 100 of 5,963 RNA–protein pairs in 61.1 ms