RNA–Protein interactions for RNA: YGL011C

SCL1, Transcript of Alpha 1 subunit of the 20S proteasome, yeastyeast

Gene SCL1, Length 759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCL1YGL011C HXT8P40886 569 aa7.38□□□□□ -1.23
SCL1YGL011C UBP2Q01476 1272 aa7.38□□□□□ -1.23
SCL1YGL011C LEU1P07264 779 aaKnown RBP7.37□□□□□ -1.23
SCL1YGL011C KAP122P32767 1081 aa7.37□□□□□ -1.23
SCL1YGL011C UBP15P50101 1230 aa7.37□□□□□ -1.23
SCL1YGL011C UFD2P54860 961 aa7.37□□□□□ -1.23
SCL1YGL011C YLR346CQ06139 101 aa7.37□□□□□ -1.23
SCL1YGL011C GPI13Q07830 1017 aa7.37□□□□□ -1.23
SCL1YGL011C GLY1P37303 387 aaKnown RBP7.36□□□□□ -1.23
SCL1YGL011C MNL2Q12205 849 aa7.36□□□□□ -1.23
SCL1YGL011C RPC31P17890 251 aa7.35□□□□□ -1.23
SCL1YGL011C MET4P32389 672 aa7.35□□□□□ -1.23
SCL1YGL011C BSD2P38356 321 aa7.35□□□□□ -1.23
SCL1YGL011C ATE1P16639 503 aa7.34□□□□□ -1.23
SCL1YGL011C MSN1P22148 382 aa7.34□□□□□ -1.23
SCL1YGL011C NAB2P32505 525 aaKnown RBP RIP-Chip data7.34□□□□□ -1.23not detected
SCL1YGL011C SMC1P32908 1225 aa7.34□□□□□ -1.23
SCL1YGL011C OSH7P38755 437 aa7.34□□□□□ -1.23
SCL1YGL011C POL32P47110 350 aa7.34□□□□□ -1.23
SCL1YGL011C RRP15Q06511 250 aaPredicted RBP7.34□□□□□ -1.23
SCL1YGL011C TY1A-BLQ12266 440 aa7.34□□□□□ -1.23
SCL1YGL011C MET22P32179 357 aa7.33□□□□□ -1.24
SCL1YGL011C RGD2P43556 714 aa7.33□□□□□ -1.24
SCL1YGL011C SCW11P53189 542 aa7.33□□□□□ -1.24
SCL1YGL011C RGP1P16664 663 aa7.32□□□□□ -1.24
SCL1YGL011C RAD55P38953 406 aa7.32□□□□□ -1.24
SCL1YGL011C NAM8Q00539 523 aaKnown RBP7.32□□□□□ -1.24
SCL1YGL011C CUS1Q02554 436 aaPredicted RBP7.32□□□□□ -1.24
SCL1YGL011C LCB5Q06147 687 aaKnown RBP7.32□□□□□ -1.24
SCL1YGL011C GIP1P38229 639 aa7.31□□□□□ -1.24
SCL1YGL011C FIR1P40020 876 aa7.31□□□□□ -1.24
SCL1YGL011C YDR444WQ04093 687 aa7.31□□□□□ -1.24
SCL1YGL011C YOR296WQ08748 1289 aa7.31□□□□□ -1.24
SCL1YGL011C STB3Q12427 513 aa7.31□□□□□ -1.24
SCL1YGL011C ASF1P32447 279 aa7.3□□□□□ -1.24
SCL1YGL011C ISW1P38144 1129 aa7.3□□□□□ -1.24
SCL1YGL011C NTA1P40354 457 aa7.3□□□□□ -1.24
SCL1YGL011C TIF6Q12522 245 aaKnown RBP7.3□□□□□ -1.24
SCL1YGL011C MRPL16P38064 232 aa7.29□□□□□ -1.24
SCL1YGL011C SKP1P52286 194 aa7.29□□□□□ -1.24
SCL1YGL011C CDC55Q00362 526 aa7.29□□□□□ -1.24
SCL1YGL011C YNL011CP53980 444 aa7.28□□□□□ -1.24
SCL1YGL011C PHO4P07270 312 aaKnown RBP7.27□□□□□ -1.25
SCL1YGL011C IRS4P36115 615 aaKnown RBP7.27□□□□□ -1.25
SCL1YGL011C PSY2P40164 858 aa7.27□□□□□ -1.25
SCL1YGL011C ROG3P43602 733 aa7.27□□□□□ -1.25
SCL1YGL011C ITC1P53125 1264 aa7.26□□□□□ -1.25
SCL1YGL011C SNU71P53207 620 aaKnown RBP7.26□□□□□ -1.25
SCL1YGL011C YNR040WP53736 256 aa7.26□□□□□ -1.25
SCL1YGL011C RSC4Q02206 625 aa7.26□□□□□ -1.25
SCL1YGL011C TY1A-MR1Q04215 440 aa7.25□□□□□ -1.25
SCL1YGL011C APM2P38700 605 aa7.24□□□□□ -1.25
SCL1YGL011C BSC2Q05611 235 aa7.24□□□□□ -1.25
SCL1YGL011C EMG1Q06287 252 aaKnown RBP7.24□□□□□ -1.25
SCL1YGL011C CCP1P00431 361 aa7.23□□□□□ -1.25
SCL1YGL011C RPT1P33299 467 aaKnown RBP7.23□□□□□ -1.25
SCL1YGL011C MGE1P38523 228 aa7.23□□□□□ -1.25
SCL1YGL011C AIM46P38885 310 aa7.23□□□□□ -1.25
SCL1YGL011C YIR007WP40566 764 aa7.23□□□□□ -1.25
SCL1YGL011C DAK2P43550 591 aa7.23□□□□□ -1.25
SCL1YGL011C CUZ1P53899 274 aa7.23□□□□□ -1.25
SCL1YGL011C SEC8P32855 1065 aa7.22□□□□□ -1.25
SCL1YGL011C YJR107WP47145 328 aa7.22□□□□□ -1.25
SCL1YGL011C SAM37P50110 327 aa7.22□□□□□ -1.25
SCL1YGL011C YMR265CQ03508 461 aaKnown RBP7.22□□□□□ -1.25
SCL1YGL011C DIT1P21623 536 aa7.21□□□□□ -1.26
SCL1YGL011C GCD6P32501 712 aaKnown RBP7.21□□□□□ -1.26
SCL1YGL011C NCL1P38205 684 aaKnown RBP7.21□□□□□ -1.26
SCL1YGL011C YBR287WP38355 427 aa7.21□□□□□ -1.26
SCL1YGL011C YIL165CP40446 119 aa7.21□□□□□ -1.26
SCL1YGL011C CAF120P53836 1060 aa7.21□□□□□ -1.26
SCL1YGL011C OYE2Q03558 400 aaKnown RBP7.21□□□□□ -1.26
SCL1YGL011C NOC3Q07896 663 aaPredicted RBP7.21□□□□□ -1.26
SCL1YGL011C FYV10P40492 516 aa7.2□□□□□ -1.26
SCL1YGL011C MCM2P29469 868 aa7.19□□□□□ -1.26
SCL1YGL011C VPS35P34110 944 aa7.19□□□□□ -1.26
SCL1YGL011C MET1P36150 593 aa7.19□□□□□ -1.26
SCL1YGL011C PAM1P37304 830 aaKnown RBP7.19□□□□□ -1.26
SCL1YGL011C MSC7P38694 644 aa7.19□□□□□ -1.26
SCL1YGL011C CIC1P38779 376 aaKnown RBP7.19□□□□□ -1.26
SCL1YGL011C ACO2P39533 789 aa7.19□□□□□ -1.26
SCL1YGL011C KRE33P53914 1056 aaKnown RBP7.19□□□□□ -1.26
SCL1YGL011C TOS4Q06266 489 aa7.19□□□□□ -1.26
SCL1YGL011C INP54Q08227 384 aaKnown RBP7.19□□□□□ -1.26
SCL1YGL011C IDI1P15496 288 aa7.18□□□□□ -1.26
SCL1YGL011C CTR9P89105 1077 aa7.18□□□□□ -1.26
SCL1YGL011C COBP00163 385 aa7.17□□□□□ -1.26
SCL1YGL011C RPP1AP05318 106 aaPredicted RBP7.17□□□□□ -1.26
SCL1YGL011C GAR1P28007 205 aaKnown RBP7.17□□□□□ -1.26
SCL1YGL011C PYC2P32327 1180 aaKnown RBP7.17□□□□□ -1.26
SCL1YGL011C YHL008CP38750 627 aa7.17□□□□□ -1.26
SCL1YGL011C YER156CP40093 338 aaKnown RBP7.17□□□□□ -1.26
SCL1YGL011C FLP1P03870 423 aa7.16□□□□□ -1.26
SCL1YGL011C FPS1P23900 669 aa7.16□□□□□ -1.26
SCL1YGL011C PPT1P53043 513 aa7.16□□□□□ -1.26
SCL1YGL011C NOP7P53261 605 aaKnown RBP7.16□□□□□ -1.26
SCL1YGL011C ADE12P80210 433 aaKnown RBP7.16□□□□□ -1.26
SCL1YGL011C SPR28Q04921 423 aa7.16□□□□□ -1.26
SCL1YGL011C HEH2Q03281 663 aa7.15□□□□□ -1.26
SCL1YGL011C CEM1P39525 442 aa7.14□□□□□ -1.27
Retrieved 100 of 5,963 RNA–protein pairs in 70.4 ms