RNA–Protein interactions for RNA: YER004W

FMP52, Transcript of Protein of unknown function, yeast

Gene FMP52, Length 696 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
FMP52	YER004W	YIR014W	P40570	242 aa		13.56	□□□□□ -0.24
FMP52	YER004W	IRC4	Q03036	179 aa		13.56	□□□□□ -0.24
FMP52	YER004W	FAS2	P19097	1887 aa	Known RBP	13.56	□□□□□ -0.24
FMP52	YER004W	FIG2	P25653	1609 aa		13.55	□□□□□ -0.24
FMP52	YER004W	HAL5	P38970	855 aa	Known RBP	13.55	□□□□□ -0.24
FMP52	YER004W	HXT13	P39924	564 aa		13.55	□□□□□ -0.24
FMP52	YER004W	PIB2	P53191	635 aa		13.55	□□□□□ -0.24
FMP52	YER004W	HXT17	P53631	564 aa		13.55	□□□□□ -0.24
FMP52	YER004W	INM2	Q05533	292 aa		13.55	□□□□□ -0.24
FMP52	YER004W	PSF3	Q12146	194 aa		13.55	□□□□□ -0.24
FMP52	YER004W	HKR1	P41809	1802 aa		13.55	□□□□□ -0.24
FMP52	YER004W	RET1	P22276	1149 aa	Known RBP	13.54	□□□□□ -0.24
FMP52	YER004W	ICL1	P28240	557 aa	Predicted RBP	13.54	□□□□□ -0.24
FMP52	YER004W	YKU70	P32807	602 aa		13.54	□□□□□ -0.24
FMP52	YER004W	AAP1	P37898	856 aa	Known RBP	13.54	□□□□□ -0.24
FMP52	YER004W	GLO3	P38682	493 aa	Known RBP	13.54	□□□□□ -0.24
FMP52	YER004W	YMR147W	P40218	223 aa	Known RBP	13.54	□□□□□ -0.24
FMP52	YER004W	YIR042C	P40586	236 aa		13.54	□□□□□ -0.24
FMP52	YER004W	KRI1	P42846	591 aa	Known RBP	13.54	□□□□□ -0.24
FMP52	YER004W	KIN4	Q01919	800 aa		13.54	□□□□□ -0.24
FMP52	YER004W	JJJ2	P46997	583 aa		13.53	□□□□□ -0.24
FMP52	YER004W	TOP1	P04786	769 aa		13.52	□□□□□ -0.25
FMP52	YER004W	LCB1	P25045	558 aa	Known RBP	13.51	□□□□□ -0.25
FMP52	YER004W	RLF2	Q12495	606 aa		13.51	□□□□□ -0.25
FMP52	YER004W	OPI1	P21957	404 aa		13.5	□□□□□ -0.25
FMP52	YER004W	RPT3	P33298	428 aa	Known RBP	13.5	□□□□□ -0.25
FMP52	YER004W	CYB2	P00175	591 aa		13.49	□□□□□ -0.25
FMP52	YER004W	GSM1	P42950	618 aa		13.49	□□□□□ -0.25
FMP52	YER004W	YFH7	P43591	353 aa		13.49	□□□□□ -0.25
FMP52	YER004W	IRC8	P47046	822 aa		13.49	□□□□□ -0.25
FMP52	YER004W	RNR2	P09938	399 aa	Known RBP	13.48	□□□□□ -0.25
FMP52	YER004W	MDL2	P33311	773 aa		13.48	□□□□□ -0.25
FMP52	YER004W	PTK1	P36002	662 aa	Predicted RBP	13.48	□□□□□ -0.25
FMP52	YER004W	RPS9B	P05755	195 aa	Known RBP	13.47	□□□□□ -0.25
FMP52	YER004W	GEF1	P37020	779 aa		13.47	□□□□□ -0.25
FMP52	YER004W	BOI1	P38041	980 aa	Known RBP	13.47	□□□□□ -0.25
FMP52	YER004W	RRP8	P38961	392 aa	Known RBP	13.47	□□□□□ -0.25
FMP52	YER004W	SET4	P42948	560 aa		13.47	□□□□□ -0.25
FMP52	YER004W	TAH18	Q12181	623 aa		13.47	□□□□□ -0.25
FMP52	YER004W	PRP42	Q03776	544 aa	Known RBP	13.46	□□□□□ -0.25
FMP52	YER004W	TOS4	Q06266	489 aa		13.46	□□□□□ -0.25
FMP52	YER004W	RRG1	Q12167	365 aa	Predicted RBP	13.46	□□□□□ -0.25
FMP52	YER004W	NPL4	P33755	580 aa		13.45	□□□□□ -0.26
FMP52	YER004W	GRX7	P38068	203 aa		13.45	□□□□□ -0.26
FMP52	YER004W	SHC1	P39000	512 aa		13.45	□□□□□ -0.26
FMP52	YER004W	BBC1	P47068	1157 aa		13.45	□□□□□ -0.26
FMP52	YER004W	DPL1	Q05567	589 aa		13.45	□□□□□ -0.26
FMP52	YER004W	WRS1	Q12109	432 aa	Known RBP	13.45	□□□□□ -0.26
FMP52	YER004W	PCT1	P13259	424 aa		13.44	□□□□□ -0.26
FMP52	YER004W	MET1	P36150	593 aa		13.44	□□□□□ -0.26
FMP52	YER004W	IOC3	P43596	787 aa		13.44	□□□□□ -0.26
FMP52	YER004W	ARG82	P07250	355 aa		13.43	□□□□□ -0.26
FMP52	YER004W	SRS2	P12954	1174 aa		13.43	□□□□□ -0.26
FMP52	YER004W	SEN54	Q02825	467 aa	Predicted RBP	13.43	□□□□□ -0.26
FMP52	YER004W	SSF2	Q12153	453 aa	Predicted RBP	13.43	□□□□□ -0.26
FMP52	YER004W	LAM4	P38800	1345 aa		13.42	□□□□□ -0.26
FMP52	YER004W	SIS2	P36024	562 aa		13.42	□□□□□ -0.26
FMP52	YER004W	OPY1	P38271	328 aa		13.42	□□□□□ -0.26
FMP52	YER004W	CIC1	P38779	376 aa	Known RBP	13.42	□□□□□ -0.26
FMP52	YER004W	PIP2	P52960	996 aa		13.42	□□□□□ -0.26
FMP52	YER004W	SQS1	P53866	767 aa	Known RBP	13.42	□□□□□ -0.26
FMP52	YER004W	PKH3	Q03306	898 aa	Predicted RBP	13.42	□□□□□ -0.26
FMP52	YER004W	KAR5	Q04746	504 aa		13.42	□□□□□ -0.26
FMP52	YER004W	GAS5	Q08193	484 aa		13.42	□□□□□ -0.26
FMP52	YER004W	SLN1	P39928	1220 aa	Predicted RBP	13.41	□□□□□ -0.26
FMP52	YER004W	SPO22	P40511	975 aa		13.41	□□□□□ -0.26
FMP52	YER004W	ESF1	Q06344	628 aa	Known RBP	13.41	□□□□□ -0.26
FMP52	YER004W	DIP2	Q12220	943 aa	Predicted RBP	13.41	□□□□□ -0.26
FMP52	YER004W	TRL1	P09880	827 aa	Known RBP	13.4	□□□□□ -0.26
FMP52	YER004W	MSM1	P22438	575 aa		13.4	□□□□□ -0.26
FMP52	YER004W	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	13.4	□□□□□ -0.26	not detected
FMP52	YER004W	APL6	P46682	809 aa		13.4	□□□□□ -0.26
FMP52	YER004W	PUS6	P53294	404 aa		13.4	□□□□□ -0.26
FMP52	YER004W	ACK1	Q07622	623 aa	Predicted RBP	13.4	□□□□□ -0.26
FMP52	YER004W	RPS7A	P26786	190 aa	Known RBP	13.39	□□□□□ -0.27
FMP52	YER004W	IMP2'	P32351	346 aa		13.39	□□□□□ -0.27
FMP52	YER004W	AFG2	P32794	780 aa		13.39	□□□□□ -0.27
FMP52	YER004W	PGA3	Q12746	312 aa	Known RBP	13.39	□□□□□ -0.27
FMP52	YER004W	AIM9	P40053	627 aa	Known RBP	13.38	□□□□□ -0.27
FMP52	YER004W	ARP5	P53946	755 aa		13.38	□□□□□ -0.27
FMP52	YER004W	CRF1	Q04930	467 aa		13.38	□□□□□ -0.27
FMP52	YER004W	EAF7	P53911	425 aa	Known RBP	13.37	□□□□□ -0.27
FMP52	YER004W	MRD1	Q06106	887 aa	Known RBP	13.37	□□□□□ -0.27
FMP52	YER004W	ATG20	Q07528	640 aa		13.37	□□□□□ -0.27
FMP52	YER004W	PPM2	Q08282	695 aa		13.37	□□□□□ -0.27
FMP52	YER004W	SNF3	P10870	884 aa		13.36	□□□□□ -0.27
FMP52	YER004W	PEP3	P27801	918 aa		13.36	□□□□□ -0.27
FMP52	YER004W	FPK1	P53739	893 aa		13.36	□□□□□ -0.27
FMP52	YER004W	SSA1	P10591	642 aa	Known RBP	13.35	□□□□□ -0.27
FMP52	YER004W	COQ1	P18900	473 aa		13.35	□□□□□ -0.27
FMP52	YER004W	UFD2	P54860	961 aa		13.35	□□□□□ -0.27
FMP52	YER004W	SPN1	Q06505	410 aa	Predicted RBP	13.35	□□□□□ -0.27
FMP52	YER004W	VPS24	P36095	224 aa	Known RBP	13.34	□□□□□ -0.27
FMP52	YER004W	SLI15	P38283	698 aa		13.34	□□□□□ -0.27
FMP52	YER004W	CRG1	P38892	291 aa	RIP-Chip data	13.34	□□□□□ -0.27	not detected
FMP52	YER004W	TRM44	Q02648	567 aa	Known RBP	13.34	□□□□□ -0.27
FMP52	YER004W	IME2	P32581	645 aa		13.33	□□□□□ -0.28
FMP52	YER004W	VID28	P40547	921 aa		13.33	□□□□□ -0.28
FMP52	YER004W	VPS20	Q04272	221 aa		13.33	□□□□□ -0.28
FMP52	YER004W	YPL260W	Q08977	551 aa		13.33	□□□□□ -0.28

Retrieved 100 of 5,963 RNA–protein pairs in 12.6 ms