RNA–Protein interactions for RNA: YDR487C

RIB3, Transcript of 3,4-dihydroxy-2-butanone-4-phosphate synthase (DHBP synthase), yeastyeast

Gene RIB3, Length 627 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RIB3YDR487C RAD2P07276 1031 aa11.64□□□□□ -0.55
RIB3YDR487C RPS7AP26786 190 aaKnown RBP11.64□□□□□ -0.55
RIB3YDR487C TFA1P36100 482 aa11.64□□□□□ -0.55
RIB3YDR487C ETP1P38748 585 aaKnown RBP11.64□□□□□ -0.55
RIB3YDR487C DUS1P53759 423 aaKnown RBP11.64□□□□□ -0.55
RIB3YDR487C YNG2P38806 282 aaKnown RBP11.63□□□□□ -0.55
RIB3YDR487C ACK1Q07622 623 aaPredicted RBP11.63□□□□□ -0.55
RIB3YDR487C WRS1Q12109 432 aaKnown RBP11.63□□□□□ -0.55
RIB3YDR487C FLO11P08640 1367 aa11.63□□□□□ -0.55
RIB3YDR487C TOM1Q03280 3268 aa11.62□□□□□ -0.55
RIB3YDR487C SEC18P18759 758 aaKnown RBP11.61□□□□□ -0.55
RIB3YDR487C SLA1P32790 1244 aa11.61□□□□□ -0.55
RIB3YDR487C RPT3P33298 428 aaKnown RBP11.61□□□□□ -0.55
RIB3YDR487C YFH7P43591 353 aa11.61□□□□□ -0.55
RIB3YDR487C TYW1Q08960 810 aaKnown RBP11.61□□□□□ -0.55
RIB3YDR487C GYP5Q12344 894 aa11.61□□□□□ -0.55
RIB3YDR487C RRI2Q12348 645 aa11.61□□□□□ -0.55
RIB3YDR487C POM152P39685 1337 aa11.6□□□□□ -0.55
RIB3YDR487C SSF1P38789 453 aaPredicted RBP11.6□□□□□ -0.55
RIB3YDR487C HKR1P41809 1802 aa11.6□□□□□ -0.55
RIB3YDR487C PNT1P38969 423 aa11.59□□□□□ -0.55
RIB3YDR487C SPO1P53541 631 aa11.59□□□□□ -0.55
RIB3YDR487C MTC3P53077 123 aa11.58□□□□□ -0.56
RIB3YDR487C PUS6P53294 404 aa11.58□□□□□ -0.56
RIB3YDR487C FIG2P25653 1609 aa11.57□□□□□ -0.56
RIB3YDR487C UTP7P40055 554 aaKnown RBP11.57□□□□□ -0.56
RIB3YDR487C HGH1P48362 394 aaKnown RBP11.57□□□□□ -0.56
RIB3YDR487C RRT6P53117 311 aaPredicted RBP11.57□□□□□ -0.56
RIB3YDR487C PRS1P32895 427 aaKnown RBP11.56□□□□□ -0.56
RIB3YDR487C BSD2P38356 321 aa11.56□□□□□ -0.56
RIB3YDR487C NIT1P40447 199 aa11.56□□□□□ -0.56
RIB3YDR487C YIR042CP40586 236 aa11.56□□□□□ -0.56
RIB3YDR487C AI2P03876 854 aa11.55□□□□□ -0.56
RIB3YDR487C GLO3P38682 493 aaKnown RBP11.55□□□□□ -0.56
RIB3YDR487C YNL193WP53870 558 aa11.55□□□□□ -0.56
RIB3YDR487C INM2Q05533 292 aa11.55□□□□□ -0.56
RIB3YDR487C TIF6Q12522 245 aaKnown RBP11.55□□□□□ -0.56
RIB3YDR487C CSR2Q12734 1121 aa11.55□□□□□ -0.56
RIB3YDR487C NCB2Q92317 146 aa11.55□□□□□ -0.56
RIB3YDR487C GCD7P32502 381 aaPredicted RBP11.54□□□□□ -0.56
RIB3YDR487C PTK1P36002 662 aaPredicted RBP11.54□□□□□ -0.56
RIB3YDR487C FUN12P39730 1002 aaKnown RBP11.54□□□□□ -0.56
RIB3YDR487C YJL171CP46992 396 aa11.54□□□□□ -0.56
RIB3YDR487C ISW2Q08773 1120 aa11.54□□□□□ -0.56
RIB3YDR487C PIF1P07271 859 aa11.53□□□□□ -0.56
RIB3YDR487C HVG1P0CE11 249 aa11.53□□□□□ -0.56
RIB3YDR487C GAL2P13181 574 aa11.53□□□□□ -0.56
RIB3YDR487C MDL2P33311 773 aa11.53□□□□□ -0.56
RIB3YDR487C PCS60P38137 543 aaKnown RBP RIP-Chip data11.53□□□□□ -0.56 RIP-Chip
RIB3YDR487C HAL5P38970 855 aaKnown RBP11.53□□□□□ -0.56
RIB3YDR487C PUF6Q04373 656 aaKnown RBP11.53□□□□□ -0.56
RIB3YDR487C RPN7Q06103 429 aaKnown RBP11.53□□□□□ -0.56
RIB3YDR487C APL6P46682 809 aa11.52□□□□□ -0.57
RIB3YDR487C ILV3P39522 585 aaKnown RBP11.5□□□□□ -0.57
RIB3YDR487C SRF1Q12516 437 aa11.5□□□□□ -0.57
RIB3YDR487C CST9Q06032 482 aa11.49□□□□□ -0.57
RIB3YDR487C SNF3P10870 884 aa11.48□□□□□ -0.57
RIB3YDR487C POL32P47110 350 aa11.48□□□□□ -0.57
RIB3YDR487C TPS3P38426 1054 aaKnown RBP11.47□□□□□ -0.57
RIB3YDR487C RSC30P38781 883 aa11.47□□□□□ -0.57
RIB3YDR487C RAD53P22216 821 aa11.46□□□□□ -0.57
RIB3YDR487C BOI1P38041 980 aaKnown RBP11.46□□□□□ -0.57
RIB3YDR487C NMD2P38798 1089 aaKnown RBP11.46□□□□□ -0.57
RIB3YDR487C BDP1P46678 594 aa11.46□□□□□ -0.57
RIB3YDR487C YGL242CP53066 181 aa11.46□□□□□ -0.57
RIB3YDR487C PMA1P05030 918 aaKnown RBP11.45□□□□□ -0.58
RIB3YDR487C PFK2P16862 959 aaKnown RBP RIP-Chip data11.45□□□□□ -0.58not detected
RIB3YDR487C ADP1P25371 1049 aa11.45□□□□□ -0.58
RIB3YDR487C APE3P37302 537 aaKnown RBP11.45□□□□□ -0.58
RIB3YDR487C KEL1P38853 1164 aaKnown RBP11.45□□□□□ -0.58
RIB3YDR487C PIP2P52960 996 aa11.45□□□□□ -0.58
RIB3YDR487C RBA50Q04418 439 aa11.45□□□□□ -0.58
RIB3YDR487C GIN4Q12263 1142 aa11.45□□□□□ -0.58
RIB3YDR487C CYB2P00175 591 aa11.44□□□□□ -0.58
RIB3YDR487C GRX7P38068 203 aa11.43□□□□□ -0.58
RIB3YDR487C NOP2P40991 618 aaKnown RBP11.43□□□□□ -0.58
RIB3YDR487C MLC1P53141 149 aa11.43□□□□□ -0.58
RIB3YDR487C JIP4Q03361 876 aa11.43□□□□□ -0.58
RIB3YDR487C PEX29Q03370 554 aa11.43□□□□□ -0.58
RIB3YDR487C MOT2P34909 587 aaKnown RBP11.42□□□□□ -0.58
RIB3YDR487C KTR3P38130 404 aaPredicted RBP11.42□□□□□ -0.58
RIB3YDR487C YBL028CP38202 106 aa11.42□□□□□ -0.58
RIB3YDR487C NSG2P53898 299 aa11.42□□□□□ -0.58
RIB3YDR487C PCL8Q08966 492 aa11.42□□□□□ -0.58
RIB3YDR487C PDR18P53756 1333 aa11.41□□□□□ -0.58
RIB3YDR487C NOT3P06102 836 aaKnown RBP11.41□□□□□ -0.58
RIB3YDR487C NCS6P53088 359 aa11.41□□□□□ -0.58
RIB3YDR487C ALO1P54783 526 aaKnown RBP11.41□□□□□ -0.58
RIB3YDR487C PPM2Q08282 695 aa11.4□□□□□ -0.58
RIB3YDR487C DUR1,2P32528 1835 aaKnown RBP11.38□□□□□ -0.59
RIB3YDR487C ASH1P34233 588 aa11.38□□□□□ -0.59
RIB3YDR487C SPT21P35209 758 aa11.38□□□□□ -0.59
RIB3YDR487C ECM21P38167 1117 aaKnown RBP11.38□□□□□ -0.59
RIB3YDR487C GEF1P37020 779 aa11.37□□□□□ -0.59
RIB3YDR487C PBY1P38254 753 aa11.37□□□□□ -0.59
RIB3YDR487C MSH4P40965 878 aaPredicted RBP11.37□□□□□ -0.59
RIB3YDR487C KEL3Q08979 651 aaPredicted RBP11.37□□□□□ -0.59
RIB3YDR487C SDH2P21801 266 aa11.36□□□□□ -0.59
RIB3YDR487C OCT1P35999 772 aa11.36□□□□□ -0.59
RIB3YDR487C ACA1P39970 489 aa11.36□□□□□ -0.59
Retrieved 100 of 5,963 RNA–protein pairs in 1131.4 ms