RNA–Protein interactions for RNA: YDR486C

VPS60, Transcript of Protein involved in late endosome to vacuole transport, yeastyeast

Gene VPS60, Length 690 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS60YDR486C GCR2Q01722 534 aa12.81□□□□□ -0.36
VPS60YDR486C FAS2P19097 1887 aaKnown RBP12.79□□□□□ -0.36
VPS60YDR486C HKR1P41809 1802 aa12.78□□□□□ -0.36
VPS60YDR486C KTR1P27810 393 aaKnown RBP12.78□□□□□ -0.36
VPS60YDR486C YIR042CP40586 236 aa12.78□□□□□ -0.36
VPS60YDR486C RIM20Q12033 661 aa12.78□□□□□ -0.36
VPS60YDR486C TOP1P04786 769 aa12.77□□□□□ -0.37
VPS60YDR486C DLD1P32891 587 aa12.77□□□□□ -0.37
VPS60YDR486C PBY1P38254 753 aa12.77□□□□□ -0.37
VPS60YDR486C INM2Q05533 292 aa12.77□□□□□ -0.37
VPS60YDR486C TOS4Q06266 489 aa12.77□□□□□ -0.37
VPS60YDR486C RPT3P33298 428 aaKnown RBP12.76□□□□□ -0.37
VPS60YDR486C HXT17P53631 564 aa12.76□□□□□ -0.37
VPS60YDR486C DPL1Q05567 589 aa12.76□□□□□ -0.37
VPS60YDR486C GAS5Q08193 484 aa12.76□□□□□ -0.37
VPS60YDR486C AAP1P37898 856 aaKnown RBP12.75□□□□□ -0.37
VPS60YDR486C HXT13P39924 564 aa12.75□□□□□ -0.37
VPS60YDR486C DIP2Q12220 943 aaPredicted RBP12.75□□□□□ -0.37
VPS60YDR486C OSH3P38713 996 aaKnown RBP12.74□□□□□ -0.37
VPS60YDR486C SHC1P39000 512 aa12.74□□□□□ -0.37
VPS60YDR486C YMR147WP40218 223 aaKnown RBP12.74□□□□□ -0.37
VPS60YDR486C FPR4Q06205 392 aaPredicted RBP12.74□□□□□ -0.37
VPS60YDR486C STM1P39015 273 aaKnown RBP12.73□□□□□ -0.37
VPS60YDR486C GSM1P42950 618 aa12.73□□□□□ -0.37
VPS60YDR486C YFH7P43591 353 aa12.73□□□□□ -0.37
VPS60YDR486C JJJ2P46997 583 aa12.73□□□□□ -0.37
VPS60YDR486C PSF3Q12146 194 aa12.73□□□□□ -0.37
VPS60YDR486C SSA1P10591 642 aaKnown RBP12.72□□□□□ -0.37
VPS60YDR486C GRX7P38068 203 aa12.72□□□□□ -0.37
VPS60YDR486C TIF4632P39936 914 aaKnown RBP12.72□□□□□ -0.37
VPS60YDR486C PRP42Q03776 544 aaKnown RBP12.72□□□□□ -0.37
VPS60YDR486C WRS1Q12109 432 aaKnown RBP12.72□□□□□ -0.37
VPS60YDR486C PTK1P36002 662 aaPredicted RBP12.71□□□□□ -0.37
VPS60YDR486C YIR014WP40570 242 aa12.71□□□□□ -0.37
VPS60YDR486C BBC1P47068 1157 aa12.71□□□□□ -0.37
VPS60YDR486C SQS1P53866 767 aaKnown RBP12.71□□□□□ -0.37
VPS60YDR486C CYB2P00175 591 aa12.7□□□□□ -0.38
VPS60YDR486C RPS9BP05755 195 aaKnown RBP12.7□□□□□ -0.38
VPS60YDR486C ARG82P07250 355 aa12.7□□□□□ -0.38
VPS60YDR486C PKH3Q03306 898 aaPredicted RBP12.7□□□□□ -0.38
VPS60YDR486C RRG1Q12167 365 aaPredicted RBP12.7□□□□□ -0.38
VPS60YDR486C LAM4P38800 1345 aa12.69□□□□□ -0.38
VPS60YDR486C OPI1P21957 404 aa12.69□□□□□ -0.38
VPS60YDR486C KAR5Q04746 504 aa12.69□□□□□ -0.38
VPS60YDR486C ATG20Q07528 640 aa12.69□□□□□ -0.38
VPS60YDR486C AFG2P32794 780 aa12.68□□□□□ -0.38
VPS60YDR486C FLO11P08640 1367 aa12.68□□□□□ -0.38
VPS60YDR486C SNF3P10870 884 aa12.67□□□□□ -0.38
VPS60YDR486C NPL4P33755 580 aa12.67□□□□□ -0.38
VPS60YDR486C BOI1P38041 980 aaKnown RBP12.67□□□□□ -0.38
VPS60YDR486C IRC8P47046 822 aa12.67□□□□□ -0.38
VPS60YDR486C FPK1P53739 893 aa12.67□□□□□ -0.38
VPS60YDR486C RPS7AP26786 190 aaKnown RBP12.66□□□□□ -0.38
VPS60YDR486C MDL2P33311 773 aa12.66□□□□□ -0.38
VPS60YDR486C GEF1P37020 779 aa12.66□□□□□ -0.38
VPS60YDR486C TAH18Q12181 623 aa12.66□□□□□ -0.38
VPS60YDR486C IOC3P43596 787 aa12.65□□□□□ -0.38
VPS60YDR486C ENP2P48234 707 aaKnown RBP12.65□□□□□ -0.38
VPS60YDR486C MSM1P22438 575 aa12.64□□□□□ -0.39
VPS60YDR486C TRL1P09880 827 aaKnown RBP12.63□□□□□ -0.39
VPS60YDR486C MET1P36150 593 aa12.63□□□□□ -0.39
VPS60YDR486C ACK1Q07622 623 aaPredicted RBP12.63□□□□□ -0.39
VPS60YDR486C SLI15P38283 698 aa12.62□□□□□ -0.39
VPS60YDR486C APL6P46682 809 aa12.62□□□□□ -0.39
VPS60YDR486C PUS6P53294 404 aa12.62□□□□□ -0.39
VPS60YDR486C PPM2Q08282 695 aa12.62□□□□□ -0.39
VPS60YDR486C FLO1P32768 1537 aa12.62□□□□□ -0.39
VPS60YDR486C TPM1P17536 199 aaKnown RBP12.61□□□□□ -0.39
VPS60YDR486C COQ1P18900 473 aa12.61□□□□□ -0.39
VPS60YDR486C GAP1P19145 602 aaPredicted RBP12.61□□□□□ -0.39
VPS60YDR486C NSG2P53898 299 aa12.61□□□□□ -0.39
VPS60YDR486C RLF2Q12495 606 aa12.61□□□□□ -0.39
VPS60YDR486C STV1P37296 890 aa12.6□□□□□ -0.39
VPS60YDR486C CIC1P38779 376 aaKnown RBP12.6□□□□□ -0.39
VPS60YDR486C AIM9P40053 627 aaKnown RBP12.6□□□□□ -0.39
VPS60YDR486C PIP2P52960 996 aa12.6□□□□□ -0.39
VPS60YDR486C TRM44Q02648 567 aaKnown RBP12.6□□□□□ -0.39
VPS60YDR486C CRF1Q04930 467 aa12.6□□□□□ -0.39
VPS60YDR486C PGA3Q12746 312 aaKnown RBP12.6□□□□□ -0.39
VPS60YDR486C OPY1P38271 328 aa12.59□□□□□ -0.39
VPS60YDR486C VPS4P52917 437 aa12.59□□□□□ -0.39
VPS60YDR486C SSF2Q12153 453 aaPredicted RBP12.59□□□□□ -0.39
VPS60YDR486C SKI2P35207 1287 aaKnown RBP RIP-Chip data12.58□□□□□ -0.4not detected
VPS60YDR486C KRI1P42846 591 aaKnown RBP12.58□□□□□ -0.4
VPS60YDR486C CHO2P05374 869 aaKnown RBP12.57□□□□□ -0.4
VPS60YDR486C RNR2P09938 399 aaKnown RBP12.57□□□□□ -0.4
VPS60YDR486C GLC3P32775 704 aa12.57□□□□□ -0.4
VPS60YDR486C RRP8P38961 392 aaKnown RBP12.57□□□□□ -0.4
VPS60YDR486C FET4P40988 552 aa12.57□□□□□ -0.4
VPS60YDR486C YJL171CP46992 396 aa12.57□□□□□ -0.4
VPS60YDR486C SEN54Q02825 467 aaPredicted RBP12.57□□□□□ -0.4
VPS60YDR486C PCT1P13259 424 aa12.56□□□□□ -0.4
VPS60YDR486C UTP7P40055 554 aaKnown RBP12.56□□□□□ -0.4
VPS60YDR486C SPO22P40511 975 aa12.56□□□□□ -0.4
VPS60YDR486C MTC3P53077 123 aa12.56□□□□□ -0.4
VPS60YDR486C IMP2'P32351 346 aa12.55□□□□□ -0.4
VPS60YDR486C SLN1P39928 1220 aaPredicted RBP12.55□□□□□ -0.4
VPS60YDR486C TIM50Q02776 476 aa12.55□□□□□ -0.4
VPS60YDR486C YLR278CQ05854 1341 aa12.55□□□□□ -0.4
VPS60YDR486C THS1P04801 734 aaKnown RBP12.54□□□□□ -0.4
Retrieved 100 of 5,963 RNA–protein pairs in 17 ms