RNA–Protein interactions for RNA: YDR477W

SNF1, Transcript of AMP-activated serine/threonine protein kinase, yeastyeast

Gene SNF1, Length 1,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF1YDR477W YJR008WP47085 338 aa11.54□□□□□ -0.56
SNF1YDR477W PSK2Q08217 1101 aa11.54□□□□□ -0.56
SNF1YDR477W PET111P08468 800 aa11.54□□□□□ -0.56
SNF1YDR477W GSY2P27472 705 aa11.54□□□□□ -0.56
SNF1YDR477W STM1P39015 273 aaKnown RBP11.54□□□□□ -0.56
SNF1YDR477W OSW7P43611 510 aa11.54□□□□□ -0.56
SNF1YDR477W YKL068W-AQ3E826 78 aa11.53□□□□□ -0.56
SNF1YDR477W RFC5P38251 354 aa11.52□□□□□ -0.56
SNF1YDR477W YHL017WP38745 532 aa11.52□□□□□ -0.56
SNF1YDR477W SML1Q04964 104 aa11.52□□□□□ -0.56
SNF1YDR477W MED8P38304 223 aa11.52□□□□□ -0.57
SNF1YDR477W ECM1P39715 212 aa11.52□□□□□ -0.57
SNF1YDR477W MSB3P48566 633 aaPredicted RBP11.52□□□□□ -0.57
SNF1YDR477W MRS2Q01926 470 aa11.52□□□□□ -0.57
SNF1YDR477W TLG2Q08144 397 aa11.52□□□□□ -0.57
SNF1YDR477W NOC2P39744 710 aaKnown RBP11.51□□□□□ -0.57
SNF1YDR477W YGL140CP53120 1219 aa11.51□□□□□ -0.57
SNF1YDR477W APL4Q12028 832 aa11.51□□□□□ -0.57
SNF1YDR477W NOP53Q12080 455 aaKnown RBP11.51□□□□□ -0.57
SNF1YDR477W PRP5P21372 849 aaPredicted RBP11.5□□□□□ -0.57
SNF1YDR477W MSH1P25846 959 aa11.5□□□□□ -0.57
SNF1YDR477W PCH2P38126 564 aa11.5□□□□□ -0.57
SNF1YDR477W EPS1P40557 701 aa11.5□□□□□ -0.57
SNF1YDR477W MSH4P40965 878 aaPredicted RBP11.5□□□□□ -0.57
SNF1YDR477W PSY4P38193 441 aa11.5□□□□□ -0.57
SNF1YDR477W MATALPHA2P0CY08 210 aa11.49□□□□□ -0.57
SNF1YDR477W HMLALPHA2P0CY09 210 aa11.49□□□□□ -0.57
SNF1YDR477W XKS1P42826 600 aa11.49□□□□□ -0.57
SNF1YDR477W BBC1P47068 1157 aa11.49□□□□□ -0.57
SNF1YDR477W STR2P47164 639 aa11.49□□□□□ -0.57
SNF1YDR477W VPS64Q03944 604 aa11.49□□□□□ -0.57
SNF1YDR477W SSK22P25390 1331 aaPredicted RBP11.49□□□□□ -0.57
SNF1YDR477W PET123P17558 318 aa11.48□□□□□ -0.57
SNF1YDR477W FBP26P32604 452 aa11.48□□□□□ -0.57
SNF1YDR477W YKE2P52553 114 aa11.48□□□□□ -0.57
SNF1YDR477W RNT1Q02555 471 aa11.48□□□□□ -0.57
SNF1YDR477W YLR407WQ06070 228 aa11.48□□□□□ -0.57
SNF1YDR477W UTP10P42945 1769 aaKnown RBP11.48□□□□□ -0.57
SNF1YDR477W VPS41P38959 992 aa11.48□□□□□ -0.57
SNF1YDR477W CDC15P27636 974 aa11.47□□□□□ -0.57
SNF1YDR477W TFG2P41896 400 aaPredicted RBP11.47□□□□□ -0.57
SNF1YDR477W YMR102CQ03177 834 aa11.47□□□□□ -0.57
SNF1YDR477W RFT1P38206 574 aaPredicted RBP11.47□□□□□ -0.57
SNF1YDR477W SET1P38827 1080 aaKnown RBP11.47□□□□□ -0.57
SNF1YDR477W BUD6P41697 788 aa11.47□□□□□ -0.57
SNF1YDR477W MEC3Q02574 474 aa11.47□□□□□ -0.57
SNF1YDR477W ECM23Q02710 187 aa11.47□□□□□ -0.57
SNF1YDR477W GYL1Q04322 720 aa11.47□□□□□ -0.57
SNF1YDR477W YOL087CQ99247 1116 aa11.47□□□□□ -0.57
SNF1YDR477W AI2P03876 854 aa11.46□□□□□ -0.58
SNF1YDR477W MCM4P30665 933 aaKnown RBP11.46□□□□□ -0.58
SNF1YDR477W MVP1P40959 511 aaKnown RBP11.46□□□□□ -0.58
SNF1YDR477W ISW2Q08773 1120 aa11.46□□□□□ -0.58
SNF1YDR477W RRB1Q04225 511 aaKnown RBP11.45□□□□□ -0.58
SNF1YDR477W TMA16Q08687 178 aa11.45□□□□□ -0.58
SNF1YDR477W PSH1Q12161 406 aa11.45□□□□□ -0.58
SNF1YDR477W MCM16Q12262 181 aa11.45□□□□□ -0.58
SNF1YDR477W STE11P23561 717 aa11.45□□□□□ -0.58
SNF1YDR477W SPC110P32380 944 aa11.45□□□□□ -0.58
SNF1YDR477W YKT6P36015 200 aaKnown RBP11.45□□□□□ -0.58
SNF1YDR477W GDT1P38301 280 aaPredicted RBP11.45□□□□□ -0.58
SNF1YDR477W RTT107P38850 1070 aa11.45□□□□□ -0.58
SNF1YDR477W GIN4Q12263 1142 aa11.45□□□□□ -0.58
SNF1YDR477W PRP45P28004 379 aaPredicted RBP11.44□□□□□ -0.58
SNF1YDR477W APL2P36000 726 aaPredicted RBP11.44□□□□□ -0.58
SNF1YDR477W DSN1P40568 576 aa11.44□□□□□ -0.58
SNF1YDR477W VPS75P53853 264 aa11.44□□□□□ -0.58
SNF1YDR477W PEP3P27801 918 aa11.43□□□□□ -0.58
SNF1YDR477W YCG1Q06680 1035 aa11.43□□□□□ -0.58
SNF1YDR477W RNA1P11745 407 aaKnown RBP11.43□□□□□ -0.58
SNF1YDR477W UBC1P21734 215 aaKnown RBP11.43□□□□□ -0.58
SNF1YDR477W IMP2'P32351 346 aa11.43□□□□□ -0.58
SNF1YDR477W EPL1P43572 832 aa11.43□□□□□ -0.58
SNF1YDR477W RRP43P25359 394 aaPredicted RBP11.42□□□□□ -0.58
SNF1YDR477W SWE1P32944 819 aa11.42□□□□□ -0.58
SNF1YDR477W APT1P49435 187 aaKnown RBP11.41□□□□□ -0.58
SNF1YDR477W PGI1P12709 554 aaKnown RBP11.41□□□□□ -0.58
SNF1YDR477W ESF1Q06344 628 aaKnown RBP11.41□□□□□ -0.58
SNF1YDR477W GYP5Q12344 894 aa11.41□□□□□ -0.58
SNF1YDR477W OSM1P21375 501 aaKnown RBP11.4□□□□□ -0.58
SNF1YDR477W FCP1Q03254 732 aa11.4□□□□□ -0.58
SNF1YDR477W RBA50Q04418 439 aa11.4□□□□□ -0.58
SNF1YDR477W RPN7Q06103 429 aaKnown RBP11.4□□□□□ -0.58
SNF1YDR477W YPR204WQ08995 1032 aa11.4□□□□□ -0.58
SNF1YDR477W PDC1P06169 563 aaKnown RBP11.39□□□□□ -0.59
SNF1YDR477W CAF130P53280 1122 aaPredicted RBP11.39□□□□□ -0.59
SNF1YDR477W TCB1Q12466 1186 aa11.39□□□□□ -0.59
SNF1YDR477W LAM4P38800 1345 aa11.39□□□□□ -0.59
SNF1YDR477W PHO13P19881 312 aa11.39□□□□□ -0.59
SNF1YDR477W REI1P38344 393 aaPredicted RBP11.39□□□□□ -0.59
SNF1YDR477W ADE16P54113 591 aaKnown RBP11.39□□□□□ -0.59
SNF1YDR477W HSP82P02829 709 aaKnown RBP11.38□□□□□ -0.59
SNF1YDR477W RGP1P16664 663 aa11.38□□□□□ -0.59
SNF1YDR477W OPI1P21957 404 aa11.38□□□□□ -0.59
SNF1YDR477W OSH3P38713 996 aaKnown RBP11.38□□□□□ -0.59
SNF1YDR477W SEC9P40357 651 aa11.38□□□□□ -0.59
SNF1YDR477W PXL1P36166 706 aa11.37□□□□□ -0.59
SNF1YDR477W CTK3P46963 296 aaPredicted RBP11.37□□□□□ -0.59
SNF1YDR477W UBP16Q02863 499 aa11.37□□□□□ -0.59
SNF1YDR477W FAS2P19097 1887 aaKnown RBP11.37□□□□□ -0.59
Retrieved 100 of 5,963 RNA–protein pairs in 41.3 ms