RNA–Protein interactions for RNA: YDR301W

CFT1, Transcript of RNA-binding subunit of the mRNA cleavage and polyadenylation factor, yeastyeast

Gene CFT1, Length 4,074 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CFT1YDR301W LCB1P25045 558 aaKnown RBP2.05□□□□□ -2.08
CFT1YDR301W SIS1P25294 352 aaKnown RBP2.05□□□□□ -2.08
CFT1YDR301W HAL5P38970 855 aaKnown RBP2.05□□□□□ -2.08
CFT1YDR301W IOC3P43596 787 aa2.05□□□□□ -2.08
CFT1YDR301W MSN5P52918 1224 aa2.05□□□□□ -2.08
CFT1YDR301W SPO1P53541 631 aa2.05□□□□□ -2.08
CFT1YDR301W NCB2Q92317 146 aa2.05□□□□□ -2.08
CFT1YDR301W SNF3P10870 884 aa2.05□□□□□ -2.08
CFT1YDR301W SEC18P18759 758 aaKnown RBP2.05□□□□□ -2.08
CFT1YDR301W SPL2P38839 148 aa2.05□□□□□ -2.08
CFT1YDR301W YGL082WP53155 381 aa2.05□□□□□ -2.08
CFT1YDR301W PKH3Q03306 898 aaPredicted RBP2.05□□□□□ -2.08
CFT1YDR301W PUF6Q04373 656 aaKnown RBP2.05□□□□□ -2.08
CFT1YDR301W MGM1P32266 881 aa2.05□□□□□ -2.08
CFT1YDR301W SMY1P32364 656 aaKnown RBP2.05□□□□□ -2.08
CFT1YDR301W YER156CP40093 338 aaKnown RBP2.05□□□□□ -2.08
CFT1YDR301W YGR122WP53272 402 aa2.05□□□□□ -2.08
CFT1YDR301W HPC2Q01448 625 aa2.05□□□□□ -2.08
CFT1YDR301W VPS64Q03944 604 aa2.05□□□□□ -2.08
CFT1YDR301W WRS1Q12109 432 aaKnown RBP2.05□□□□□ -2.08
CFT1YDR301W SNU66Q12420 587 aaPredicted RBP2.05□□□□□ -2.08
CFT1YDR301W YLR278CQ05854 1341 aa2.04□□□□□ -2.08
CFT1YDR301W SPO22P40511 975 aa2.04□□□□□ -2.08
CFT1YDR301W MSH4P40965 878 aaPredicted RBP2.04□□□□□ -2.08
CFT1YDR301W FAR11P53917 953 aa2.04□□□□□ -2.08
CFT1YDR301W GCR2Q01722 534 aa2.04□□□□□ -2.08
CFT1YDR301W FCP1Q03254 732 aa2.04□□□□□ -2.08
CFT1YDR301W NKP2Q06162 153 aa2.04□□□□□ -2.08
CFT1YDR301W IRC3Q06683 689 aa2.04□□□□□ -2.08
CFT1YDR301W TYW1Q08960 810 aaKnown RBP2.04□□□□□ -2.08
CFT1YDR301W KTR1P27810 393 aaKnown RBP2.04□□□□□ -2.08
CFT1YDR301W DSF2P38213 736 aa2.04□□□□□ -2.08
CFT1YDR301W YBR287WP38355 427 aa2.04□□□□□ -2.08
CFT1YDR301W ALO1P54783 526 aaKnown RBP2.04□□□□□ -2.08
CFT1YDR301W THI3Q07471 609 aa2.04□□□□□ -2.08
CFT1YDR301W ACK1Q07622 623 aaPredicted RBP2.04□□□□□ -2.08
CFT1YDR301W ARG82P07250 355 aa2.04□□□□□ -2.08
CFT1YDR301W GLC3P32775 704 aa2.04□□□□□ -2.08
CFT1YDR301W UTP7P40055 554 aaKnown RBP2.04□□□□□ -2.08
CFT1YDR301W NOP2P40991 618 aaKnown RBP2.04□□□□□ -2.08
CFT1YDR301W EAF6P47128 113 aa2.04□□□□□ -2.08
CFT1YDR301W DPL1Q05567 589 aa2.04□□□□□ -2.08
CFT1YDR301W ATG20Q07528 640 aa2.04□□□□□ -2.08
CFT1YDR301W TAH18Q12181 623 aa2.04□□□□□ -2.08
CFT1YDR301W LAM4P38800 1345 aa2.04□□□□□ -2.08
CFT1YDR301W SKI2P35207 1287 aaKnown RBP RIP-Chip data2.03□□□□□ -2.08not detected
CFT1YDR301W HXT10P43581 546 aa2.03□□□□□ -2.08
CFT1YDR301W LSP1Q12230 341 aaKnown RBP2.03□□□□□ -2.08
CFT1YDR301W TPM1P17536 199 aaKnown RBP2.03□□□□□ -2.08
CFT1YDR301W SWC3P31376 625 aa2.03□□□□□ -2.08
CFT1YDR301W AAP1P37898 856 aaKnown RBP2.03□□□□□ -2.08
CFT1YDR301W NMD2P38798 1089 aaKnown RBP2.03□□□□□ -2.08
CFT1YDR301W YFH7P43591 353 aa2.03□□□□□ -2.08
CFT1YDR301W MRPS35P53292 345 aa2.03□□□□□ -2.08
CFT1YDR301W IRC4Q03036 179 aa2.03□□□□□ -2.08
CFT1YDR301W CRF1Q04930 467 aa2.03□□□□□ -2.08
CFT1YDR301W RET1P22276 1149 aaKnown RBP2.03□□□□□ -2.08
CFT1YDR301W FRD1P32614 470 aaKnown RBP2.03□□□□□ -2.08
CFT1YDR301W YKU70P32807 602 aa2.03□□□□□ -2.08
CFT1YDR301W PKH1Q03407 766 aa2.03□□□□□ -2.08
CFT1YDR301W SRC1Q03707 834 aa2.03□□□□□ -2.08
CFT1YDR301W SSF2Q12153 453 aaPredicted RBP2.03□□□□□ -2.08
CFT1YDR301W TUS1Q06412 1307 aa2.03□□□□□ -2.09
CFT1YDR301W FLO11P08640 1367 aa2.03□□□□□ -2.09
CFT1YDR301W TIF4632P39936 914 aaKnown RBP2.02□□□□□ -2.09
CFT1YDR301W AIM9P40053 627 aaKnown RBP2.02□□□□□ -2.09
CFT1YDR301W HYR1P40581 163 aaKnown RBP2.02□□□□□ -2.09
CFT1YDR301W PRP42Q03776 544 aaKnown RBP2.02□□□□□ -2.09
CFT1YDR301W SAS4Q04003 481 aa2.02□□□□□ -2.09
CFT1YDR301W SKG3Q06315 1026 aa2.02□□□□□ -2.09
CFT1YDR301W PCL8Q08966 492 aa2.02□□□□□ -2.09
CFT1YDR301W RIM20Q12033 661 aa2.02□□□□□ -2.09
CFT1YDR301W RRG1Q12167 365 aaPredicted RBP2.02□□□□□ -2.09
CFT1YDR301W ASF1P32447 279 aa2.02□□□□□ -2.09
CFT1YDR301W OPY1P38271 328 aa2.02□□□□□ -2.09
CFT1YDR301W CRG1P38892 291 aaRIP-Chip data2.02□□□□□ -2.09not detected
CFT1YDR301W APL6P46682 809 aa2.02□□□□□ -2.09
CFT1YDR301W DMA2P53924 522 aa2.02□□□□□ -2.09
CFT1YDR301W CTI6Q08923 506 aa2.02□□□□□ -2.09
CFT1YDR301W CLF1Q12309 687 aaPredicted RBP2.02□□□□□ -2.09
CFT1YDR301W SET4P42948 560 aa2.02□□□□□ -2.09
CFT1YDR301W CWH41P53008 833 aa2.02□□□□□ -2.09
CFT1YDR301W RPT4P53549 437 aaKnown RBP2.02□□□□□ -2.09
CFT1YDR301W RPN7Q06103 429 aaKnown RBP2.02□□□□□ -2.09
CFT1YDR301W MPH3P0CE00 602 aa2.01□□□□□ -2.09
CFT1YDR301W RTG2P32608 588 aaKnown RBP2.01□□□□□ -2.09
CFT1YDR301W NGR1P32831 672 aaKnown RBP2.01□□□□□ -2.09
CFT1YDR301W MYO3P36006 1272 aa2.01□□□□□ -2.09
CFT1YDR301W MTC3P53077 123 aa2.01□□□□□ -2.09
CFT1YDR301W YNL193WP53870 558 aa2.01□□□□□ -2.09
CFT1YDR301W TIM50Q02776 476 aa2.01□□□□□ -2.09
CFT1YDR301W PPM2Q08282 695 aa2.01□□□□□ -2.09
CFT1YDR301W RIF1P29539 1916 aa2.01□□□□□ -2.09
CFT1YDR301W TRL1P09880 827 aaKnown RBP2.01□□□□□ -2.09
CFT1YDR301W DLD1P32891 587 aa2.01□□□□□ -2.09
CFT1YDR301W MET1P36150 593 aa2.01□□□□□ -2.09
CFT1YDR301W RTS1P38903 757 aa2.01□□□□□ -2.09
CFT1YDR301W YGR117CP53270 476 aa2.01□□□□□ -2.09
CFT1YDR301W SPN1Q06505 410 aaPredicted RBP2.01□□□□□ -2.09
CFT1YDR301W AI2P03876 854 aa2.01□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms