RNA–Protein interactions for RNA: YDR192C

NUP42, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP42, Length 1,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP42YDR192C DAL1P32375 460 aa6.72□□□□□ -1.33
NUP42YDR192C LDH1P38139 375 aa6.72□□□□□ -1.33
NUP42YDR192C POL32P47110 350 aa6.72□□□□□ -1.33
NUP42YDR192C FRT1Q99332 602 aa6.72□□□□□ -1.33
NUP42YDR192C TRK1P12685 1235 aa6.71□□□□□ -1.34
NUP42YDR192C MLF3P32047 452 aa6.71□□□□□ -1.34
NUP42YDR192C MGE1P38523 228 aa6.71□□□□□ -1.34
NUP42YDR192C RGA1P39083 1007 aa6.71□□□□□ -1.34
NUP42YDR192C HXT8P40886 569 aa6.71□□□□□ -1.34
NUP42YDR192C RPB10P22139 70 aa6.7□□□□□ -1.34
NUP42YDR192C VMA3P25515 160 aa6.7□□□□□ -1.34
NUP42YDR192C FIR1P40020 876 aa6.7□□□□□ -1.34
NUP42YDR192C SUT1P53032 299 aaKnown RBP6.7□□□□□ -1.34
NUP42YDR192C GCR2Q01722 534 aa6.7□□□□□ -1.34
NUP42YDR192C WHI5Q12416 295 aa6.7□□□□□ -1.34
NUP42YDR192C RPP1AP05318 106 aaPredicted RBP6.69□□□□□ -1.34
NUP42YDR192C IRE1P32361 1115 aa6.69□□□□□ -1.34
NUP42YDR192C GCD6P32501 712 aaKnown RBP6.69□□□□□ -1.34
NUP42YDR192C YJR098CP47139 656 aa6.69□□□□□ -1.34
NUP42YDR192C YLR346CQ06139 101 aa6.69□□□□□ -1.34
NUP42YDR192C BNI1P41832 1953 aa6.68□□□□□ -1.34
NUP42YDR192C DLD1P32891 587 aa6.68□□□□□ -1.34
NUP42YDR192C ESC1Q03661 1658 aaKnown RBP6.68□□□□□ -1.34
NUP42YDR192C MYO2P19524 1574 aaKnown RBP6.67□□□□□ -1.34
NUP42YDR192C KAP122P32767 1081 aa6.67□□□□□ -1.34
NUP42YDR192C QDR2P40474 542 aa6.67□□□□□ -1.34
NUP42YDR192C YNL165WP53891 406 aa6.67□□□□□ -1.34
NUP42YDR192C CDC55Q00362 526 aa6.67□□□□□ -1.34
NUP42YDR192C UBP2Q01476 1272 aa6.67□□□□□ -1.34
NUP42YDR192C SVF1Q05515 481 aa6.67□□□□□ -1.34
NUP42YDR192C RRP15Q06511 250 aaPredicted RBP6.67□□□□□ -1.34
NUP42YDR192C SSK2P53599 1579 aa6.66□□□□□ -1.34
NUP42YDR192C NAP1P25293 417 aaKnown RBP6.66□□□□□ -1.34
NUP42YDR192C SLA1P32790 1244 aa6.66□□□□□ -1.34
NUP42YDR192C UBP15P50101 1230 aa6.66□□□□□ -1.34
NUP42YDR192C SAM37P50110 327 aa6.66□□□□□ -1.34
NUP42YDR192C YNL011CP53980 444 aa6.66□□□□□ -1.34
NUP42YDR192C RPA190P10964 1664 aaKnown RBP6.65□□□□□ -1.34
NUP42YDR192C MET4P32389 672 aa6.65□□□□□ -1.34
NUP42YDR192C SHM1P37292 490 aaPredicted RBP6.65□□□□□ -1.34
NUP42YDR192C ISW1P38144 1129 aa6.65□□□□□ -1.34
NUP42YDR192C RAD55P38953 406 aa6.65□□□□□ -1.34
NUP42YDR192C NTA1P40354 457 aa6.65□□□□□ -1.34
NUP42YDR192C BRE2P43132 505 aa6.65□□□□□ -1.34
NUP42YDR192C CDC25P04821 1589 aa6.65□□□□□ -1.35
NUP42YDR192C RPS31P05759 152 aaKnown RBP6.64□□□□□ -1.35
NUP42YDR192C LEU1P07264 779 aaKnown RBP6.64□□□□□ -1.35
NUP42YDR192C PDC6P26263 563 aaKnown RBP6.64□□□□□ -1.35
NUP42YDR192C CIC1P38779 376 aaKnown RBP6.64□□□□□ -1.35
NUP42YDR192C MTO1P53070 669 aa6.64□□□□□ -1.35
NUP42YDR192C RPC31P17890 251 aa6.63□□□□□ -1.35
NUP42YDR192C KTR2P33550 425 aa6.63□□□□□ -1.35
NUP42YDR192C PAM1P37304 830 aaKnown RBP6.63□□□□□ -1.35
NUP42YDR192C GIP1P38229 639 aa6.63□□□□□ -1.35
NUP42YDR192C RSC4Q02206 625 aa6.63□□□□□ -1.35
NUP42YDR192C YOR296WQ08748 1289 aa6.63□□□□□ -1.35
NUP42YDR192C PSH1Q12161 406 aa6.63□□□□□ -1.35
NUP42YDR192C MNL2Q12205 849 aa6.63□□□□□ -1.35
NUP42YDR192C TY1A-DR3Q12441 440 aa6.63□□□□□ -1.35
NUP42YDR192C TCB1Q12466 1186 aa6.63□□□□□ -1.35
NUP42YDR192C PHO4P07270 312 aaKnown RBP6.62□□□□□ -1.35
NUP42YDR192C ATE1P16639 503 aa6.62□□□□□ -1.35
NUP42YDR192C MSN1P22148 382 aa6.62□□□□□ -1.35
NUP42YDR192C VPS35P34110 944 aa6.62□□□□□ -1.35
NUP42YDR192C IRS4P36115 615 aaKnown RBP6.62□□□□□ -1.35
NUP42YDR192C MET10P39692 1035 aa6.62□□□□□ -1.35
NUP42YDR192C YJR107WP47145 328 aa6.62□□□□□ -1.35
NUP42YDR192C ALD2P47771 506 aa6.62□□□□□ -1.35
NUP42YDR192C BSC2Q05611 235 aa6.62□□□□□ -1.35
NUP42YDR192C SIN3P22579 1536 aa6.61□□□□□ -1.35
NUP42YDR192C LTE1P07866 1435 aa6.61□□□□□ -1.35
NUP42YDR192C GPI13Q07830 1017 aa6.61□□□□□ -1.35
NUP42YDR192C GLY1P37303 387 aaKnown RBP6.6□□□□□ -1.35
NUP42YDR192C PSY2P40164 858 aa6.6□□□□□ -1.35
NUP42YDR192C SKP1P52286 194 aa6.6□□□□□ -1.35
NUP42YDR192C NOC3Q07896 663 aaPredicted RBP6.6□□□□□ -1.35
NUP42YDR192C OXR1Q08952 273 aa6.6□□□□□ -1.35
NUP42YDR192C DNF1P32660 1571 aa6.6□□□□□ -1.35
NUP42YDR192C RGP1P16664 663 aa6.59□□□□□ -1.35
NUP42YDR192C STB3Q12427 513 aa6.59□□□□□ -1.35
NUP42YDR192C UFD4P33202 1483 aa6.59□□□□□ -1.36
NUP42YDR192C SEC8P32855 1065 aa6.58□□□□□ -1.36
NUP42YDR192C RPT1P33299 467 aaKnown RBP6.58□□□□□ -1.36
NUP42YDR192C RGD2P43556 714 aa6.58□□□□□ -1.36
NUP42YDR192C SCW11P53189 542 aa6.58□□□□□ -1.36
NUP42YDR192C CUS1Q02554 436 aaPredicted RBP6.58□□□□□ -1.36
NUP42YDR192C RMD1Q03441 430 aa6.58□□□□□ -1.36
NUP42YDR192C OPT2Q06593 877 aa6.58□□□□□ -1.36
NUP42YDR192C MET5P47169 1442 aa6.58□□□□□ -1.36
NUP42YDR192C CDC19P00549 500 aaKnown RBP6.57□□□□□ -1.36
NUP42YDR192C NCL1P38205 684 aaKnown RBP6.57□□□□□ -1.36
NUP42YDR192C BSD2P38356 321 aa6.57□□□□□ -1.36
NUP42YDR192C AIM46P38885 310 aa6.57□□□□□ -1.36
NUP42YDR192C DAK2P43550 591 aa6.57□□□□□ -1.36
NUP42YDR192C OYE2Q03558 400 aaKnown RBP6.57□□□□□ -1.36
NUP42YDR192C TIF6Q12522 245 aaKnown RBP6.57□□□□□ -1.36
NUP42YDR192C APM2P38700 605 aa6.56□□□□□ -1.36
NUP42YDR192C OSH7P38755 437 aa6.56□□□□□ -1.36
NUP42YDR192C MMS1Q06211 1407 aa6.56□□□□□ -1.36
NUP42YDR192C ECM2P38241 364 aaKnown RBP6.55□□□□□ -1.36
Retrieved 100 of 5,963 RNA–protein pairs in 30.4 ms