RNA–Protein interactions for RNA: YBL022C

PIM1, Transcript of ATP-dependent Lon protease, yeast

Gene PIM1, Length 3,402 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PIM1	YBL022C	GCD7	P32502	381 aa	Predicted RBP	4.66	□□□□□ -1.66
PIM1	YBL022C	SRL3	P36167	246 aa		4.66	□□□□□ -1.66
PIM1	YBL022C	PEA2	P40091	420 aa		4.66	□□□□□ -1.66
PIM1	YBL022C	FYV10	P40492	516 aa		4.66	□□□□□ -1.66
PIM1	YBL022C	ORM1	P53224	222 aa		4.66	□□□□□ -1.66
PIM1	YBL022C	PAP2	P53632	584 aa	Known RBP	4.66	□□□□□ -1.66
PIM1	YBL022C	VTC3	Q02725	835 aa		4.66	□□□□□ -1.66
PIM1	YBL022C	STE20	Q03497	939 aa	Known RBP	4.66	□□□□□ -1.66
PIM1	YBL022C	PMR1	P13586	950 aa		4.65	□□□□□ -1.66
PIM1	YBL022C	SRP40	P32583	406 aa	Predicted RBP	4.65	□□□□□ -1.66
PIM1	YBL022C	GDT1	P38301	280 aa	Predicted RBP	4.65	□□□□□ -1.66
PIM1	YBL022C	DMA1	P38823	416 aa		4.65	□□□□□ -1.66
PIM1	YBL022C	POL31	P46957	487 aa		4.65	□□□□□ -1.66
PIM1	YBL022C	ALD2	P47771	506 aa		4.65	□□□□□ -1.66
PIM1	YBL022C	BOP3	P53958	396 aa		4.65	□□□□□ -1.66
PIM1	YBL022C	CTI6	Q08923	506 aa		4.65	□□□□□ -1.66
PIM1	YBL022C	APL4	Q12028	832 aa		4.65	□□□□□ -1.66
PIM1	YBL022C	YPL150W	Q12152	901 aa		4.65	□□□□□ -1.66
PIM1	YBL022C	RPS19A	P07280	144 aa	Known RBP	4.65	□□□□□ -1.67
PIM1	YBL022C	RPS19B	P07281	144 aa	Predicted RBP	4.65	□□□□□ -1.67
PIM1	YBL022C	RNR2	P09938	399 aa	Known RBP	4.65	□□□□□ -1.67
PIM1	YBL022C	KEX2	P13134	814 aa		4.65	□□□□□ -1.67
PIM1	YBL022C	TY1B-A	O13527	1196 aa	Known RBP	4.65	□□□□□ -1.67
PIM1	YBL022C	KAR3	P17119	729 aa		4.65	□□□□□ -1.67
PIM1	YBL022C	IME1	P21190	360 aa		4.65	□□□□□ -1.67
PIM1	YBL022C	HSP104	P31539	908 aa	Known RBP	4.65	□□□□□ -1.67
PIM1	YBL022C	CSE4	P36012	229 aa		4.65	□□□□□ -1.67
PIM1	YBL022C	CCT5	P40413	562 aa	Known RBP	4.65	□□□□□ -1.67
PIM1	YBL022C	ARO80	Q04052	950 aa		4.65	□□□□□ -1.67
PIM1	YBL022C	PDB1	P32473	366 aa	Known RBP	4.64	□□□□□ -1.67
PIM1	YBL022C	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	4.64	□□□□□ -1.67	not detected
PIM1	YBL022C	TLG1	Q03322	224 aa		4.64	□□□□□ -1.67
PIM1	YBL022C	TAP42	Q04372	366 aa		4.64	□□□□□ -1.67
PIM1	YBL022C	HIM1	Q06674	414 aa		4.64	□□□□□ -1.67
PIM1	YBL022C	TRS33	Q99394	268 aa		4.64	□□□□□ -1.67
PIM1	YBL022C	RPL5	P26321	297 aa	Known RBP	4.64	□□□□□ -1.67
PIM1	YBL022C	INP52	P50942	1183 aa		4.64	□□□□□ -1.67
PIM1	YBL022C	YSH1	Q06224	779 aa	Predicted RBP	4.64	□□□□□ -1.67
PIM1	YBL022C	BIK1	P11709	440 aa		4.63	□□□□□ -1.67
PIM1	YBL022C	KRS1	P15180	591 aa	Known RBP	4.63	□□□□□ -1.67
PIM1	YBL022C	KCC4	P25389	1037 aa		4.63	□□□□□ -1.67
PIM1	YBL022C	YSW1	P38280	609 aa		4.63	□□□□□ -1.67
PIM1	YBL022C	YOR389W	Q08912	624 aa		4.63	□□□□□ -1.67
PIM1	YBL022C	PCH2	P38126	564 aa		4.63	□□□□□ -1.67
PIM1	YBL022C	DSF2	P38213	736 aa		4.63	□□□□□ -1.67
PIM1	YBL022C	VID28	P40547	921 aa		4.63	□□□□□ -1.67
PIM1	YBL022C	BDP1	P46678	594 aa		4.63	□□□□□ -1.67
PIM1	YBL022C	YJR079W	P47126	109 aa		4.63	□□□□□ -1.67
PIM1	YBL022C	FMP30	Q02883	468 aa		4.63	□□□□□ -1.67
PIM1	YBL022C	WAR1	Q03631	944 aa		4.63	□□□□□ -1.67
PIM1	YBL022C	CMS1	Q07897	291 aa	Known RBP	4.63	□□□□□ -1.67
PIM1	YBL022C	ZUO1	P32527	433 aa	Known RBP	4.63	□□□□□ -1.67
PIM1	YBL022C	HUL4	P40985	892 aa		4.63	□□□□□ -1.67
PIM1	YBL022C	ECM32	P32644	1121 aa	Known RBP	4.62	□□□□□ -1.67
PIM1	YBL022C	RRP14	P36080	434 aa	Known RBP	4.62	□□□□□ -1.67
PIM1	YBL022C	YGL242C	P53066	181 aa		4.62	□□□□□ -1.67
PIM1	YBL022C	STE23	Q06010	1027 aa		4.62	□□□□□ -1.67
PIM1	YBL022C	PSO2	P30620	661 aa		4.62	□□□□□ -1.67
PIM1	YBL022C	CDC27	P38042	758 aa		4.62	□□□□□ -1.67
PIM1	YBL022C	PTC4	P38089	393 aa		4.62	□□□□□ -1.67
PIM1	YBL022C	RFT1	P38206	574 aa	Predicted RBP	4.62	□□□□□ -1.67
PIM1	YBL022C	RIA1	P53893	1110 aa		4.62	□□□□□ -1.67
PIM1	YBL022C	PHO13	P19881	312 aa		4.62	□□□□□ -1.67
PIM1	YBL022C	YME2	P32843	850 aa		4.62	□□□□□ -1.67
PIM1	YBL022C	HEL1	P36113	551 aa		4.62	□□□□□ -1.67
PIM1	YBL022C	LEM3	P42838	414 aa		4.62	□□□□□ -1.67
PIM1	YBL022C	ALD4	P46367	519 aa	Known RBP	4.62	□□□□□ -1.67
PIM1	YBL022C	MAG2	Q06436	670 aa	Known RBP	4.62	□□□□□ -1.67
PIM1	YBL022C	UBC1	P21734	215 aa	Known RBP	4.61	□□□□□ -1.67
PIM1	YBL022C	MRPS28	P21771	286 aa		4.61	□□□□□ -1.67
PIM1	YBL022C	DPB3	P27344	201 aa		4.61	□□□□□ -1.67
PIM1	YBL022C	MET10	P39692	1035 aa		4.61	□□□□□ -1.67
PIM1	YBL022C	YPT11	P48559	417 aa		4.61	□□□□□ -1.67
PIM1	YBL022C	SRC1	Q03707	834 aa		4.61	□□□□□ -1.67
PIM1	YBL022C	PSR1	Q07800	427 aa		4.61	□□□□□ -1.67
PIM1	YBL022C	SES1	P07284	462 aa	Known RBP	4.61	□□□□□ -1.67
PIM1	YBL022C	GPA1	P08539	472 aa		4.61	□□□□□ -1.67
PIM1	YBL022C	AAP1	P37898	856 aa	Known RBP	4.61	□□□□□ -1.67
PIM1	YBL022C	TBS1	P38114	1094 aa		4.61	□□□□□ -1.67
PIM1	YBL022C	MGA2	P40578	1113 aa		4.61	□□□□□ -1.67
PIM1	YBL022C	YNL247W	P53852	767 aa	Known RBP	4.61	□□□□□ -1.67
PIM1	YBL022C	ARP5	P53946	755 aa		4.61	□□□□□ -1.67
PIM1	YBL022C	CSI1	Q04368	295 aa		4.61	□□□□□ -1.67
PIM1	YBL022C	RRP1	P35178	278 aa	Predicted RBP	4.6	□□□□□ -1.67
PIM1	YBL022C	MAK21	Q12176	1025 aa	Known RBP	4.6	□□□□□ -1.67
PIM1	YBL022C	GSY2	P27472	705 aa		4.6	□□□□□ -1.67
PIM1	YBL022C	SPT16	P32558	1035 aa	Known RBP	4.6	□□□□□ -1.67
PIM1	YBL022C	SAP1	P39955	897 aa	Known RBP	4.6	□□□□□ -1.67
PIM1	YBL022C	MRX1	P40050	688 aa		4.6	□□□□□ -1.67
PIM1	YBL022C	ALF1	P53904	254 aa		4.6	□□□□□ -1.67
PIM1	YBL022C	SEC5	P89102	971 aa		4.6	□□□□□ -1.67
PIM1	YBL022C	MDM38	Q08179	573 aa		4.6	□□□□□ -1.67
PIM1	YBL022C	SAC3	P46674	1301 aa		4.6	□□□□□ -1.67
PIM1	YBL022C	GAL11	P19659	1081 aa		4.6	□□□□□ -1.67
PIM1	YBL022C	PRX1	P34227	261 aa	Known RBP	4.6	□□□□□ -1.67
PIM1	YBL022C	NDC80	P40460	691 aa		4.6	□□□□□ -1.67
PIM1	YBL022C	SRT1	Q03175	343 aa		4.6	□□□□□ -1.67
PIM1	YBL022C	TMA16	Q08687	178 aa		4.6	□□□□□ -1.67
PIM1	YBL022C	PIF1	P07271	859 aa		4.59	□□□□□ -1.67
PIM1	YBL022C	PRE10	P21242	288 aa	Known RBP RIP-Chip data	4.59	□□□□□ -1.67	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 15.8 ms