RNA–Protein interactions for RNA: YAL021C

CCR4, Transcript of Component of the CCR4-NOT transcriptional complex, yeastyeast

Gene CCR4, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CCR4YAL021C SMC4Q12267 1418 aa8.18□□□□□ -1.1
CCR4YAL021C RIO2P40160 425 aaKnown RBP8.18□□□□□ -1.1
CCR4YAL021C KRE28Q04431 385 aa8.18□□□□□ -1.1
CCR4YAL021C SFI1Q12369 946 aa8.18□□□□□ -1.1
CCR4YAL021C TAF2P23255 1407 aa8.17□□□□□ -1.1
CCR4YAL021C VPS41P38959 992 aa8.17□□□□□ -1.1
CCR4YAL021C DLD1P32891 587 aa8.17□□□□□ -1.1
CCR4YAL021C RRP1P35178 278 aaPredicted RBP8.17□□□□□ -1.1
CCR4YAL021C ATG19P35193 415 aa8.17□□□□□ -1.1
CCR4YAL021C YHR218WP38899 603 aa8.17□□□□□ -1.1
CCR4YAL021C TGL3P40308 642 aa8.17□□□□□ -1.1
CCR4YAL021C YFR006WP43590 535 aa8.17□□□□□ -1.1
CCR4YAL021C YMR111CQ04461 462 aaPredicted RBP8.17□□□□□ -1.1
CCR4YAL021C SSQ1Q05931 657 aaPredicted RBP8.17□□□□□ -1.1
CCR4YAL021C CDC48P25694 835 aaKnown RBP8.16□□□□□ -1.1
CCR4YAL021C PTH2P34222 208 aa8.16□□□□□ -1.1
CCR4YAL021C RPC37P36121 282 aa8.16□□□□□ -1.1
CCR4YAL021C SSZ1P38788 538 aaKnown RBP8.16□□□□□ -1.1
CCR4YAL021C GGA2P38817 585 aaKnown RBP8.16□□□□□ -1.1
CCR4YAL021C ARB1P40024 610 aaKnown RBP8.16□□□□□ -1.1
CCR4YAL021C HMI1Q12039 706 aa8.16□□□□□ -1.1
CCR4YAL021C SSM4P40318 1319 aa8.16□□□□□ -1.1
CCR4YAL021C HIR2P32480 875 aa8.15□□□□□ -1.1
CCR4YAL021C YME2P32843 850 aa8.15□□□□□ -1.1
CCR4YAL021C PEP12P32854 288 aa8.15□□□□□ -1.1
CCR4YAL021C CSE1P33307 960 aa8.15□□□□□ -1.1
CCR4YAL021C TBS1P38114 1094 aa8.15□□□□□ -1.1
CCR4YAL021C IRC20Q06554 1556 aa8.15□□□□□ -1.1
CCR4YAL021C SEC15P22224 910 aa8.15□□□□□ -1.1
CCR4YAL021C MSH1P25846 959 aa8.15□□□□□ -1.1
CCR4YAL021C UBP14P38237 781 aaKnown RBP8.15□□□□□ -1.1
CCR4YAL021C UBX5Q06682 500 aa8.15□□□□□ -1.1
CCR4YAL021C TY4A-HQ6Q5P6 413 aa8.15□□□□□ -1.1
CCR4YAL021C PWP2P25635 923 aaKnown RBP8.14□□□□□ -1.11
CCR4YAL021C MSN5P52918 1224 aa8.14□□□□□ -1.11
CCR4YAL021C LCD1Q04377 747 aa8.14□□□□□ -1.11
CCR4YAL021C RPO31P04051 1460 aa8.14□□□□□ -1.11
CCR4YAL021C STE11P23561 717 aa8.14□□□□□ -1.11
CCR4YAL021C BLI1P35727 113 aa8.14□□□□□ -1.11
CCR4YAL021C ERP2P39704 215 aa8.14□□□□□ -1.11
CCR4YAL021C VHR2P40041 505 aa8.14□□□□□ -1.11
CCR4YAL021C SPO71Q03868 1245 aa8.14□□□□□ -1.11
CCR4YAL021C YIG1Q08956 461 aa8.14□□□□□ -1.11
CCR4YAL021C PUF4P25339 888 aaKnown RBP RIP-Chip data8.13□□□□□ -1.11 RIP-Chip
CCR4YAL021C VPS35P34110 944 aa8.13□□□□□ -1.11
CCR4YAL021C RTC4P53850 401 aa8.13□□□□□ -1.11
CCR4YAL021C ITT1Q04638 464 aa8.13□□□□□ -1.11
CCR4YAL021C DBP10Q12389 995 aaKnown RBP8.13□□□□□ -1.11
CCR4YAL021C PET494P07390 489 aaPredicted RBP8.13□□□□□ -1.11
CCR4YAL021C PET100P38958 111 aa8.13□□□□□ -1.11
CCR4YAL021C ERB1Q04660 807 aaKnown RBP8.13□□□□□ -1.11
CCR4YAL021C YDL121CQ07541 149 aa8.13□□□□□ -1.11
CCR4YAL021C DNL4Q08387 944 aaPredicted RBP8.13□□□□□ -1.11
CCR4YAL021C MPC54Q08550 464 aa8.13□□□□□ -1.11
CCR4YAL021C TTI1P36097 1038 aa8.12□□□□□ -1.11
CCR4YAL021C APD1P38281 316 aa8.12□□□□□ -1.11
CCR4YAL021C PNG1Q02890 363 aa8.12□□□□□ -1.11
CCR4YAL021C GNT1Q12096 491 aa8.12□□□□□ -1.11
CCR4YAL021C OCA5P38738 679 aa8.12□□□□□ -1.11
CCR4YAL021C GPI8P49018 411 aa8.12□□□□□ -1.11
CCR4YAL021C FMP30Q02883 468 aa8.12□□□□□ -1.11
CCR4YAL021C YPL225WQ08971 146 aaKnown RBP8.12□□□□□ -1.11
CCR4YAL021C ERP4Q12450 207 aa8.12□□□□□ -1.11
CCR4YAL021C MAK16P10962 306 aaPredicted RBP8.11□□□□□ -1.11
CCR4YAL021C KAR9P32526 644 aa8.11□□□□□ -1.11
CCR4YAL021C SEC66P33754 206 aa8.11□□□□□ -1.11
CCR4YAL021C PET112P33893 541 aa8.11□□□□□ -1.11
CCR4YAL021C MAL31P38156 614 aa8.11□□□□□ -1.11
CCR4YAL021C BOI2P39969 1040 aa8.11□□□□□ -1.11
CCR4YAL021C MET18P40469 1032 aa8.11□□□□□ -1.11
CCR4YAL021C MAD1P40957 749 aa8.11□□□□□ -1.11
CCR4YAL021C RTF1P53064 558 aa8.11□□□□□ -1.11
CCR4YAL021C PAP1P29468 568 aaKnown RBP8.11□□□□□ -1.11
CCR4YAL021C SWC3P31376 625 aa8.11□□□□□ -1.11
CCR4YAL021C SMY2P32909 740 aaKnown RBP8.11□□□□□ -1.11
CCR4YAL021C OSH3P38713 996 aaKnown RBP8.11□□□□□ -1.11
CCR4YAL021C INP2Q03824 705 aa8.11□□□□□ -1.11
CCR4YAL021C PHO84P25297 587 aaKnown RBP8.1□□□□□ -1.11
CCR4YAL021C SPC72P39723 622 aa8.1□□□□□ -1.11
CCR4YAL021C CWH41P53008 833 aa8.1□□□□□ -1.11
CCR4YAL021C NOP15P53927 220 aaPredicted RBP8.1□□□□□ -1.11
CCR4YAL021C PDR18P53756 1333 aa8.1□□□□□ -1.11
CCR4YAL021C STN1P38960 494 aa8.1□□□□□ -1.11
CCR4YAL021C ORM1P53224 222 aa8.1□□□□□ -1.11
CCR4YAL021C STE20Q03497 939 aaKnown RBP8.1□□□□□ -1.11
CCR4YAL021C VMA4P22203 233 aaKnown RBP8.09□□□□□ -1.11
CCR4YAL021C TLG2Q08144 397 aa8.09□□□□□ -1.11
CCR4YAL021C RFC1P38630 861 aaKnown RBP8.09□□□□□ -1.11
CCR4YAL021C YJR142WP47173 342 aa8.09□□□□□ -1.11
CCR4YAL021C ARV1Q06541 321 aa8.09□□□□□ -1.11
CCR4YAL021C IOC2Q12072 812 aa8.09□□□□□ -1.11
CCR4YAL021C NIP100P33420 868 aa8.08□□□□□ -1.12
CCR4YAL021C SLX8P40072 274 aa8.08□□□□□ -1.12
CCR4YAL021C SET2P46995 733 aaKnown RBP8.08□□□□□ -1.12
CCR4YAL021C SRP1Q02821 542 aaKnown RBP8.08□□□□□ -1.12
CCR4YAL021C CSR1Q06705 408 aaKnown RBP8.08□□□□□ -1.12
CCR4YAL021C YIL002W-AQ3E7Z5 69 aa8.08□□□□□ -1.12
CCR4YAL021C MRE11P32829 692 aa8.08□□□□□ -1.12
CCR4YAL021C MEF2P39677 819 aa8.08□□□□□ -1.12
CCR4YAL021C PHM6Q05637 104 aa8.08□□□□□ -1.12
Retrieved 100 of 5,963 RNA–protein pairs in 20.4 ms