RNA–Protein interactions for RNA: ENST00000617767.4

CPNE4-214, Transcript of copine 4, humanhuman

TSL 2 BASIC

Gene CPNE4, Length 3,556 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-214ENST00000617767 GPRASP1Q5JY77 1395 aa7.22□□□□□ -1.25
CPNE4-214ENST00000617767 EFCAB6Q5THR3 1501 aa7.22□□□□□ -1.25
CPNE4-214ENST00000617767 PLIN1O60240 522 aa7.21□□□□□ -1.25
CPNE4-214ENST00000617767 NUTM2FA1L443 756 aa7.21□□□□□ -1.26
CPNE4-214ENST00000617767 RNF17Q9BXT8 1623 aaKnown RBP7.21□□□□□ -1.26
CPNE4-214ENST00000617767 VGLL3A8MV65 326 aa7.21□□□□□ -1.26
CPNE4-214ENST00000617767 PPM1GO15355 546 aaPredicted RBP7.21□□□□□ -1.26
CPNE4-214ENST00000617767 SRPK2P78362 688 aaKnown RBP7.21□□□□□ -1.26
CPNE4-214ENST00000617767 WDR43Q15061 677 aaKnown RBP eCLIP7.21□□□□□ -1.26
CPNE4-214ENST00000617767 CENPJQ9HC77 1338 aaPredicted RBP7.21□□□□□ -1.26
CPNE4-214ENST00000617767 SCAF11Q99590 1463 aaKnown RBP7.2□□□□□ -1.26
CPNE4-214ENST00000617767 CEBPAP49715 358 aaPredicted RBP7.2□□□□□ -1.26
CPNE4-214ENST00000617767 CARD14Q9BXL6 1004 aa7.2□□□□□ -1.26
CPNE4-214ENST00000617767 ZHX1Q9UKY1 873 aaPredicted RBP7.2□□□□□ -1.26
CPNE4-214ENST00000617767 PPP2R1AP30153 589 aa7.2□□□□□ -1.26
CPNE4-214ENST00000617767 FTSJ3Q8IY81 847 aaKnown RBP7.2□□□□□ -1.26
CPNE4-214ENST00000617767 ZNF830Q96NB3 372 aaPredicted RBP7.2□□□□□ -1.26
CPNE4-214ENST00000617767 EIF2AK4Q9P2K8 1649 aaKnown RBP7.2□□□□□ -1.26
CPNE4-214ENST00000617767 POGKQ9P215 609 aa7.2□□□□□ -1.26
CPNE4-214ENST00000617767 SIGLEC1Q9BZZ2 1709 aa7.2□□□□□ -1.26
CPNE4-214ENST00000617767 FBLN1P23142 703 aa7.19□□□□□ -1.26
CPNE4-214ENST00000617767 RRP7AQ9Y3A4 280 aaKnown RBP7.19□□□□□ -1.26
CPNE4-214ENST00000617767 MYO5BQ9ULV0 1848 aa7.19□□□□□ -1.26
CPNE4-214ENST00000617767 MLH3Q9UHC1 1453 aa7.19□□□□□ -1.26
CPNE4-214ENST00000617767 NUDCQ9Y266 331 aa7.19□□□□□ -1.26
CPNE4-214ENST00000617767 EIF3AQ14152 1382 aaKnown RBP7.19□□□□□ -1.26
CPNE4-214ENST00000617767 ABCC3O15438 1527 aa7.19□□□□□ -1.26
CPNE4-214ENST00000617767 AMER1Q5JTC6 1135 aaPredicted RBP7.19□□□□□ -1.26
CPNE4-214ENST00000617767 WAPLQ7Z5K2 1190 aa7.19□□□□□ -1.26
CPNE4-214ENST00000617767 DIP2CQ9Y2E4 1556 aa7.19□□□□□ -1.26
CPNE4-214ENST00000617767 PARD3Q8TEW0 1356 aa7.18□□□□□ -1.26
CPNE4-214ENST00000617767 CDCA8Q53HL2 280 aa7.18□□□□□ -1.26
CPNE4-214ENST00000617767 VWDEQ8N2E2 1590 aa7.18□□□□□ -1.26
CPNE4-214ENST00000617767 BRD4O60885 1362 aaPredicted RBP7.18□□□□□ -1.26
CPNE4-214ENST00000617767 VGFO15240 615 aaPredicted RBP7.18□□□□□ -1.26
CPNE4-214ENST00000617767 PRAM1Q96QH2 718 aa7.18□□□□□ -1.26
CPNE4-214ENST00000617767 PDCL3Q9H2J4 239 aa7.18□□□□□ -1.26
CPNE4-214ENST00000617767 C14orf93Q9H972 538 aaKnown RBP7.18□□□□□ -1.26
CPNE4-214ENST00000617767 MAP3K4Q9Y6R4 1608 aa7.17□□□□□ -1.26
CPNE4-214ENST00000617767 RICTORQ6R327 1708 aa7.17□□□□□ -1.26
CPNE4-214ENST00000617767 C14orf37Q86TY3 774 aa7.17□□□□□ -1.26
CPNE4-214ENST00000617767 NEO1Q92859 1461 aa7.17□□□□□ -1.26
CPNE4-214ENST00000617767 CFAP74Q9C0B2 1584 aa7.17□□□□□ -1.26
CPNE4-214ENST00000617767 MORC1Q86VD1 984 aa7.17□□□□□ -1.26
CPNE4-214ENST00000617767 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.17□□□□□ -1.26
CPNE4-214ENST00000617767 APAF1O14727 1248 aa7.16□□□□□ -1.26
CPNE4-214ENST00000617767 SKAP1Q86WV1 359 aa7.16□□□□□ -1.26
CPNE4-214ENST00000617767 GGNBP2Q9H3C7 697 aa7.16□□□□□ -1.26
CPNE4-214ENST00000617767 CAMSAP1Q5T5Y3 1602 aa7.16□□□□□ -1.26
CPNE4-214ENST00000617767 IQGAP1P46940 1657 aa7.16□□□□□ -1.26
CPNE4-214ENST00000617767 TEX2Q8IWB9 1127 aa7.16□□□□□ -1.26
CPNE4-214ENST00000617767 NCKAP5LQ9HCH0 1330 aa7.16□□□□□ -1.26
CPNE4-214ENST00000617767 ERVK-7P63135 1459 aa7.16□□□□□ -1.26
CPNE4-214ENST00000617767 NFKBIBQ15653 356 aa7.16□□□□□ -1.26
CPNE4-214ENST00000617767 SOX12O15370 315 aa7.15□□□□□ -1.26
CPNE4-214ENST00000617767 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.15□□□□□ -1.26
CPNE4-214ENST00000617767 SYNMO15061 1565 aa7.15□□□□□ -1.26
CPNE4-214ENST00000617767 DIP2BQ9P265 1576 aa7.15□□□□□ -1.26
CPNE4-214ENST00000617767 NSD3Q9BZ95 1437 aa7.15□□□□□ -1.26
CPNE4-214ENST00000617767 TXNDC2Q86VQ3 553 aa7.15□□□□□ -1.26
CPNE4-214ENST00000617767 EXOC6Q8TAG9 804 aa7.15□□□□□ -1.27
CPNE4-214ENST00000617767 RCAN3Q9UKA8 241 aa7.15□□□□□ -1.27
CPNE4-214ENST00000617767 TMEM51Q9NW97 253 aa7.14□□□□□ -1.27
CPNE4-214ENST00000617767 U2SURPO15042 1029 aaKnown RBP7.14□□□□□ -1.27
CPNE4-214ENST00000617767 DDRGK1Q96HY6 314 aa7.14□□□□□ -1.27
CPNE4-214ENST00000617767 ADGRB3O60242 1522 aa7.14□□□□□ -1.27
CPNE4-214ENST00000617767 PIK3C2GO75747 1445 aa7.14□□□□□ -1.27
CPNE4-214ENST00000617767 KDM5AP29375 1690 aaKnown RBP7.13□□□□□ -1.27
CPNE4-214ENST00000617767 LRPPRCP42704 1394 aaKnown RBP7.13□□□□□ -1.27
CPNE4-214ENST00000617767 MTHFSP49914 203 aa7.13□□□□□ -1.27
CPNE4-214ENST00000617767 SLC52A1Q9NWF4 448 aa7.13□□□□□ -1.27
CPNE4-214ENST00000617767 DMRT2Q9Y5R5 561 aa7.13□□□□□ -1.27
CPNE4-214ENST00000617767 PPLO60437 1756 aa7.13□□□□□ -1.27
CPNE4-214ENST00000617767 RBM33Q96EV2 1170 aaKnown RBP7.13□□□□□ -1.27
CPNE4-214ENST00000617767 SLC26A8Q96RN1 970 aa7.13□□□□□ -1.27
CPNE4-214ENST00000617767 SPINK5Q9NQ38 1064 aaPredicted RBP7.13□□□□□ -1.27
CPNE4-214ENST00000617767 CLTCQ00610 1675 aaKnown RBP7.13□□□□□ -1.27
CPNE4-214ENST00000617767 C20orf194Q5TEA3 1177 aa7.13□□□□□ -1.27
CPNE4-214ENST00000617767 CNPY4Q8N129 248 aa7.13□□□□□ -1.27
CPNE4-214ENST00000617767 CABP1Q9NZU7 370 aa7.13□□□□□ -1.27
CPNE4-214ENST00000617767 EVC2Q86UK5 1308 aa7.12□□□□□ -1.27
CPNE4-214ENST00000617767 SMG6Q86US8 1419 aaKnown RBP7.12□□□□□ -1.27
CPNE4-214ENST00000617767 PLEKHH1Q9ULM0 1364 aa7.12□□□□□ -1.27
CPNE4-214ENST00000617767 CHRM1P11229 460 aaPredicted RBP7.12□□□□□ -1.27
CPNE4-214ENST00000617767 QRICH2Q9H0J4 1663 aa7.12□□□□□ -1.27
CPNE4-214ENST00000617767 ASXL1Q8IXJ9 1541 aa7.12□□□□□ -1.27
CPNE4-214ENST00000617767 LAMC1P11047 1609 aa7.12□□□□□ -1.27
CPNE4-214ENST00000617767 MYOM1P52179 1685 aa7.12□□□□□ -1.27
CPNE4-214ENST00000617767 MYOM2P54296 1465 aa7.12□□□□□ -1.27
CPNE4-214ENST00000617767 CDK19Q9BWU1 502 aa7.12□□□□□ -1.27
CPNE4-214ENST00000617767 PRDM10Q9NQV6 1147 aa7.12□□□□□ -1.27
CPNE4-214ENST00000617767 KCNG1Q9UIX4 513 aa7.12□□□□□ -1.27
CPNE4-214ENST00000617767 IFT172Q9UG01 1749 aa7.11□□□□□ -1.27
CPNE4-214ENST00000617767 U2AF1L5P0DN76 240 aaPredicted RBP7.11□□□□□ -1.27
CPNE4-214ENST00000617767 CLCN1P35523 988 aa7.11□□□□□ -1.27
CPNE4-214ENST00000617767 U2AF1Q01081 240 aaKnown RBP eCLIP7.11□□□□□ -1.27
CPNE4-214ENST00000617767 BCL2L13Q9BXK5 485 aa7.11□□□□□ -1.27
CPNE4-214ENST00000617767 PIK3C2BO00750 1634 aa7.11□□□□□ -1.27
CPNE4-214ENST00000617767 RRP1P56182 461 aaKnown RBP7.11□□□□□ -1.27
CPNE4-214ENST00000617767 LMTK2Q8IWU2 1503 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms