RNA–Protein interactions for RNA: ENST00000606715.3

SHANK2-219, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

Gene SHANK2, Length 5,738 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-219ENST00000606715 NLRP6P59044 892 aa13.56□□□□□ -0.24
SHANK2-219ENST00000606715 API5Q9BZZ5 524 aaKnown RBP13.56□□□□□ -0.24
SHANK2-219ENST00000606715 H3BQV1 296 aa13.55□□□□□ -0.24
SHANK2-219ENST00000606715 GNAI1P63096 354 aa13.55□□□□□ -0.24
SHANK2-219ENST00000606715 CFAP70Q5T0N1 1121 aa13.55□□□□□ -0.24
SHANK2-219ENST00000606715 IFFO2Q5TF58 517 aa13.55□□□□□ -0.24
SHANK2-219ENST00000606715 TPM2P07951 284 aa13.55□□□□□ -0.24
SHANK2-219ENST00000606715 ESCO1Q5FWF5 840 aa13.55□□□□□ -0.24
SHANK2-219ENST00000606715 MFAP1P55081 439 aaKnown RBP13.55□□□□□ -0.24
SHANK2-219ENST00000606715 CPLX2Q6PUV4 134 aaKnown RBP13.55□□□□□ -0.24
SHANK2-219ENST00000606715 MAP3K1Q13233 1512 aa13.55□□□□□ -0.24
SHANK2-219ENST00000606715 CDK13Q14004 1512 aaKnown RBP13.55□□□□□ -0.24
SHANK2-219ENST00000606715 PIP4K2BP78356 416 aa13.55□□□□□ -0.24
SHANK2-219ENST00000606715 RILPL2Q969X0 211 aa13.54□□□□□ -0.24
SHANK2-219ENST00000606715 TMEM132EQ6IEE7 984 aa13.54□□□□□ -0.24
SHANK2-219ENST00000606715 FAM184AQ8NB25 1140 aa13.54□□□□□ -0.24
SHANK2-219ENST00000606715 ARHGEF11O15085 1522 aa13.54□□□□□ -0.24
SHANK2-219ENST00000606715 SMG6Q86US8 1419 aaKnown RBP13.53□□□□□ -0.24
SHANK2-219ENST00000606715 RRP7AQ9Y3A4 280 aaKnown RBP13.53□□□□□ -0.24
SHANK2-219ENST00000606715 R3HCC1Q9Y3T6 440 aaKnown RBP13.53□□□□□ -0.24
SHANK2-219ENST00000606715 ZBED9Q6R2W3 1325 aa13.53□□□□□ -0.24
SHANK2-219ENST00000606715 RIPK4P57078 832 aa13.53□□□□□ -0.24
SHANK2-219ENST00000606715 CABP2Q9NPB3 220 aa13.53□□□□□ -0.24
SHANK2-219ENST00000606715 TRIM29Q14134 588 aa13.53□□□□□ -0.24
SHANK2-219ENST00000606715 NECTIN2Q92692 538 aa13.52□□□□□ -0.24
SHANK2-219ENST00000606715 KIF7Q2M1P5 1343 aa13.52□□□□□ -0.24
SHANK2-219ENST00000606715 TSR1Q2NL82 804 aaKnown RBP13.52□□□□□ -0.25
SHANK2-219ENST00000606715 CNTLNQ9NXG0 1405 aa13.52□□□□□ -0.25
SHANK2-219ENST00000606715 PRAM1Q96QH2 718 aa13.51□□□□□ -0.25
SHANK2-219ENST00000606715 FANCAO15360 1455 aa13.51□□□□□ -0.25
SHANK2-219ENST00000606715 APAF1O14727 1248 aa13.51□□□□□ -0.25
SHANK2-219ENST00000606715 AAMPQ13685 434 aa13.51□□□□□ -0.25
SHANK2-219ENST00000606715 CCDC47Q96A33 483 aaKnown RBP13.51□□□□□ -0.25
SHANK2-219ENST00000606715 ABTB2Q8N961 1025 aa13.51□□□□□ -0.25
SHANK2-219ENST00000606715 GAS2L2Q8NHY3 880 aa13.51□□□□□ -0.25
SHANK2-219ENST00000606715 STRN4Q9NRL3 753 aa13.51□□□□□ -0.25
SHANK2-219ENST00000606715 ERICH2A1L162 156 aa13.51□□□□□ -0.25
SHANK2-219ENST00000606715 DIAPH3Q9NSV4 1193 aa13.51□□□□□ -0.25
SHANK2-219ENST00000606715 TRDNQ13061 729 aa13.5□□□□□ -0.25
SHANK2-219ENST00000606715 NUTM2GQ5VZR2 741 aa13.5□□□□□ -0.25
SHANK2-219ENST00000606715 ATAD2Q6PL18 1390 aa13.5□□□□□ -0.25
SHANK2-219ENST00000606715 IFIT2P09913 472 aaKnown RBP13.5□□□□□ -0.25
SHANK2-219ENST00000606715 IKQ13123 557 aaPredicted RBP13.5□□□□□ -0.25
SHANK2-219ENST00000606715 CCDC27Q2M243 656 aa13.5□□□□□ -0.25
SHANK2-219ENST00000606715 DDX19BQ9UMR2 479 aa13.5□□□□□ -0.25
SHANK2-219ENST00000606715 ERBINQ96RT1 1412 aa13.49□□□□□ -0.25
SHANK2-219ENST00000606715 FBXO3Q9UK99 471 aa13.49□□□□□ -0.25
SHANK2-219ENST00000606715 ST18O60284 1047 aa13.49□□□□□ -0.25
SHANK2-219ENST00000606715 GGNBP2Q9H3C7 697 aa13.49□□□□□ -0.25
SHANK2-219ENST00000606715 BRD4O60885 1362 aaPredicted RBP13.49□□□□□ -0.25
SHANK2-219ENST00000606715 FYB1O15117 783 aa13.48□□□□□ -0.25
SHANK2-219ENST00000606715 G3BP1Q13283 466 aaKnown RBP eCLIP13.48□□□□□ -0.25
SHANK2-219ENST00000606715 PLEKHO1Q53GL0 409 aaPredicted RBP13.48□□□□□ -0.25
SHANK2-219ENST00000606715 ARID3AQ99856 593 aa13.48□□□□□ -0.25
SHANK2-219ENST00000606715 WDR62O43379 1518 aa13.48□□□□□ -0.25
SHANK2-219ENST00000606715 CAMSAP2Q08AD1 1489 aa13.48□□□□□ -0.25
SHANK2-219ENST00000606715 NFXL1Q6ZNB6 911 aa13.48□□□□□ -0.25
SHANK2-219ENST00000606715 RBM42Q9BTD8 480 aaKnown RBP13.48□□□□□ -0.25
SHANK2-219ENST00000606715 FAM177BA6PVY3 158 aa13.48□□□□□ -0.25
SHANK2-219ENST00000606715 WWC2Q6AWC2 1192 aa13.47□□□□□ -0.25
SHANK2-219ENST00000606715 HSP90AB4PQ58FF6 505 aa13.47□□□□□ -0.25
SHANK2-219ENST00000606715 RTEL1-TNFRSF6BF6WH68 1400 aa13.47□□□□□ -0.25
SHANK2-219ENST00000606715 RIC3Q7Z5B4 369 aa13.47□□□□□ -0.25
SHANK2-219ENST00000606715 TSPYL4Q9UJ04 414 aa13.47□□□□□ -0.25
SHANK2-219ENST00000606715 PCF11O94913 1555 aaKnown RBP13.47□□□□□ -0.25
SHANK2-219ENST00000606715 CPLX1O14810 134 aa13.47□□□□□ -0.25
SHANK2-219ENST00000606715 CENPQQ7L2Z9 268 aaPredicted RBP13.47□□□□□ -0.25
SHANK2-219ENST00000606715 MCTP1Q6DN14 999 aa13.46□□□□□ -0.25
SHANK2-219ENST00000606715 RUFY2Q8WXA3 655 aa13.46□□□□□ -0.25
SHANK2-219ENST00000606715 ASXL2Q76L83 1435 aa13.46□□□□□ -0.26
SHANK2-219ENST00000606715 GOLGA6L1Q8N7Z2 621 aa13.46□□□□□ -0.26
SHANK2-219ENST00000606715 PCMTD1Q96MG8 357 aaPredicted RBP13.45□□□□□ -0.26
SHANK2-219ENST00000606715 TMEM132AQ24JP5 1023 aa13.45□□□□□ -0.26
SHANK2-219ENST00000606715 CDK19Q9BWU1 502 aa13.45□□□□□ -0.26
SHANK2-219ENST00000606715 AIMP1Q12904 312 aaKnown RBP13.45□□□□□ -0.26
SHANK2-219ENST00000606715 TPM1P09493 284 aa13.45□□□□□ -0.26
SHANK2-219ENST00000606715 PLIN1O60240 522 aa13.44□□□□□ -0.26
SHANK2-219ENST00000606715 SLC4A3P48751 1232 aa13.44□□□□□ -0.26
SHANK2-219ENST00000606715 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.44□□□□□ -0.26
SHANK2-219ENST00000606715 WDR97A6NE52 1622 aa13.44□□□□□ -0.26
SHANK2-219ENST00000606715 FKBP5Q13451 457 aaPredicted RBP13.44□□□□□ -0.26
SHANK2-219ENST00000606715 FOXD4L1Q9NU39 408 aa13.44□□□□□ -0.26
SHANK2-219ENST00000606715 KIF6Q6ZMV9 814 aa13.44□□□□□ -0.26
SHANK2-219ENST00000606715 SLKQ9H2G2 1235 aaPredicted RBP13.44□□□□□ -0.26
SHANK2-219ENST00000606715 TNNT3P45378 269 aaPredicted RBP13.44□□□□□ -0.26
SHANK2-219ENST00000606715 WDR7Q9Y4E6 1490 aa13.43□□□□□ -0.26
SHANK2-219ENST00000606715 TATP17735 454 aaPredicted RBP13.43□□□□□ -0.26
SHANK2-219ENST00000606715 ADAMTS12P58397 1594 aa13.43□□□□□ -0.26
SHANK2-219ENST00000606715 THOC2Q8NI27 1593 aaKnown RBP13.43□□□□□ -0.26
SHANK2-219ENST00000606715 PAF1Q8N7H5 531 aa13.43□□□□□ -0.26
SHANK2-219ENST00000606715 NEUROD6Q96NK8 337 aa13.43□□□□□ -0.26
SHANK2-219ENST00000606715 DZIP1LQ8IYY4 767 aaKnown RBP13.43□□□□□ -0.26
SHANK2-219ENST00000606715 PNISRQ8TF01 805 aaKnown RBP13.43□□□□□ -0.26
SHANK2-219ENST00000606715 ZKSCAN1P17029 563 aaPredicted RBP13.42□□□□□ -0.26
SHANK2-219ENST00000606715 MTHFSP49914 203 aa13.42□□□□□ -0.26
SHANK2-219ENST00000606715 ANKRD45Q5TZF3 282 aa13.42□□□□□ -0.26
SHANK2-219ENST00000606715 FOXD4L5Q5VV16 416 aaPredicted RBP13.42□□□□□ -0.26
SHANK2-219ENST00000606715 FOXD4L4Q8WXT5 416 aaPredicted RBP13.42□□□□□ -0.26
SHANK2-219ENST00000606715 RAPGEF6Q8TEU7 1601 aa13.42□□□□□ -0.26
SHANK2-219ENST00000606715 RRP1P56182 461 aaKnown RBP13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms