RNA–Protein interactions for RNA: ENST00000606715.3

SHANK2-219, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

Gene SHANK2, Length 5,738 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-219ENST00000606715 DCAF8L2P0C7V8 631 aa19.51■□□□□ 0.71
SHANK2-219ENST00000606715 NISCHQ9Y2I1 1504 aa19.39■□□□□ 0.7
SHANK2-219ENST00000606715 SUPT5HO00267 1087 aaKnown RBP18.01■□□□□ 0.47
SHANK2-219ENST00000606715 SHROOM4Q9ULL8 1493 aa17.83■□□□□ 0.45
SHANK2-219ENST00000606715 FAM9AQ8IZU1 332 aaPredicted RBP17.73■□□□□ 0.43
SHANK2-219ENST00000606715 EHMT2Q96KQ7 1210 aa17.63■□□□□ 0.41
SHANK2-219ENST00000606715 APLP2Q06481 763 aa17.5■□□□□ 0.39
SHANK2-219ENST00000606715 PELP1Q8IZL8 1130 aaKnown RBP17.17■□□□□ 0.34
SHANK2-219ENST00000606715 ATP1B4Q9UN42 357 aaPredicted RBP17.05■□□□□ 0.32
SHANK2-219ENST00000606715 RANGAP1P46060 587 aaPredicted RBP17.02■□□□□ 0.32
SHANK2-219ENST00000606715 TTBK1Q5TCY1 1321 aaPredicted RBP16.96■□□□□ 0.31
SHANK2-219ENST00000606715 TRIM41Q8WV44 630 aa16.91■□□□□ 0.3
SHANK2-219ENST00000606715 ABCC9O60706 1549 aa16.91■□□□□ 0.3
SHANK2-219ENST00000606715 MYT1LQ9UL68 1186 aa16.77■□□□□ 0.27
SHANK2-219ENST00000606715 UBTFP17480 764 aaKnown RBP16.66■□□□□ 0.26
SHANK2-219ENST00000606715 ERICH6Q7L0X2 663 aa16.55■□□□□ 0.24
SHANK2-219ENST00000606715 PCGF6Q9BYE7 350 aa16.54■□□□□ 0.24
SHANK2-219ENST00000606715 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.54■□□□□ 0.24
SHANK2-219ENST00000606715 HNRNPUL2Q1KMD3 747 aaKnown RBP16.54■□□□□ 0.24
SHANK2-219ENST00000606715 PABPN1Q86U42 306 aaKnown RBP eCLIP16.51■□□□□ 0.23
SHANK2-219ENST00000606715 CCER1Q8TC90 406 aaPredicted RBP16.46■□□□□ 0.23
SHANK2-219ENST00000606715 ZEB1P37275 1124 aaPredicted RBP16.41■□□□□ 0.22
SHANK2-219ENST00000606715 CHIC1Q5VXU3 224 aa16.4■□□□□ 0.22
SHANK2-219ENST00000606715 CCDC180Q9P1Z9 1646 aa16.4■□□□□ 0.22
SHANK2-219ENST00000606715 POLR3GLQ9BT43 218 aa16.23■□□□□ 0.19
SHANK2-219ENST00000606715 NEFLP07196 543 aa16.22■□□□□ 0.19
SHANK2-219ENST00000606715 CENPBP07199 599 aaPredicted RBP16.2■□□□□ 0.18
SHANK2-219ENST00000606715 SLC4A1APQ9BWU0 796 aaKnown RBP16.19■□□□□ 0.18
SHANK2-219ENST00000606715 ITGAEP38570 1179 aa16.12■□□□□ 0.17
SHANK2-219ENST00000606715 RB1CC1Q8TDY2 1594 aa16.12■□□□□ 0.17
SHANK2-219ENST00000606715 SCRIBQ14160 1630 aa16.06■□□□□ 0.16
SHANK2-219ENST00000606715 ZCCHC6Q5VYS8 1495 aaKnown RBP16.04■□□□□ 0.16
SHANK2-219ENST00000606715 TRIM26Q12899 539 aaPredicted RBP16.01■□□□□ 0.15
SHANK2-219ENST00000606715 PPARGC1BQ86YN6 1023 aaKnown RBP15.99■□□□□ 0.15
SHANK2-219ENST00000606715 CNGB1Q14028 1251 aaPredicted RBP15.98■□□□□ 0.15
SHANK2-219ENST00000606715 DAXXQ9UER7 740 aaPredicted RBP15.97■□□□□ 0.15
SHANK2-219ENST00000606715 YTHDC1Q96MU7 727 aaKnown RBP15.96■□□□□ 0.15
SHANK2-219ENST00000606715 NACADO15069 1562 aa15.94■□□□□ 0.14
SHANK2-219ENST00000606715 MYT1Q01538 1121 aa15.91■□□□□ 0.14
SHANK2-219ENST00000606715 FBLN2P98095 1184 aa15.9■□□□□ 0.14
SHANK2-219ENST00000606715 BCANQ96GW7 911 aa15.84■□□□□ 0.13
SHANK2-219ENST00000606715 LOC105371045A0A1W2PR82 267 aa15.83■□□□□ 0.12
SHANK2-219ENST00000606715 SLC24A1O60721 1099 aa15.74■□□□□ 0.11
SHANK2-219ENST00000606715 TRIM52Q96A61 297 aa15.72■□□□□ 0.11
SHANK2-219ENST00000606715 CLSPNQ9HAW4 1339 aa15.69■□□□□ 0.1
SHANK2-219ENST00000606715 FAM50AQ14320 339 aaKnown RBP15.69■□□□□ 0.1
SHANK2-219ENST00000606715 ESF1Q9H501 851 aaKnown RBP15.69■□□□□ 0.1
SHANK2-219ENST00000606715 CSRNP3Q8WYN3 585 aa15.67■□□□□ 0.1
SHANK2-219ENST00000606715 CDK11AQ9UQ88 783 aaPredicted RBP15.63■□□□□ 0.09
SHANK2-219ENST00000606715 NPM1P06748 294 aaKnown RBP eCLIP15.62■□□□□ 0.09
SHANK2-219ENST00000606715 PLPPR3Q6T4P5 718 aa15.61■□□□□ 0.09
SHANK2-219ENST00000606715 ZBTB47Q9UFB7 747 aaPredicted RBP15.6■□□□□ 0.09
SHANK2-219ENST00000606715 ZNF326Q5BKZ1 582 aaKnown RBP15.56■□□□□ 0.08
SHANK2-219ENST00000606715 DCAF1Q9Y4B6 1507 aa15.55■□□□□ 0.08
SHANK2-219ENST00000606715 NEFMP07197 916 aa15.53■□□□□ 0.08
SHANK2-219ENST00000606715 ZNF316A6NFI3 1004 aaPredicted RBP15.52■□□□□ 0.08
SHANK2-219ENST00000606715 BAZ1BQ9UIG0 1483 aaKnown RBP15.51■□□□□ 0.07
SHANK2-219ENST00000606715 STAG3Q9UJ98 1225 aa15.47■□□□□ 0.07
SHANK2-219ENST00000606715 ERCC6Q03468 1493 aa15.45■□□□□ 0.06
SHANK2-219ENST00000606715 ARID3CA6NKF2 412 aa15.45■□□□□ 0.06
SHANK2-219ENST00000606715 HRCP23327 699 aa15.45■□□□□ 0.06
SHANK2-219ENST00000606715 CHMP7Q8WUX9 453 aaPredicted RBP15.44■□□□□ 0.06
SHANK2-219ENST00000606715 BCL11AQ9H165 835 aa15.44■□□□□ 0.06
SHANK2-219ENST00000606715 NEUROD1Q13562 356 aa15.42■□□□□ 0.06
SHANK2-219ENST00000606715 P3H3Q8IVL6 736 aa15.42■□□□□ 0.06
SHANK2-219ENST00000606715 ZNF777Q9ULD5 760 aaPredicted RBP15.39■□□□□ 0.05
SHANK2-219ENST00000606715 BAZ1AQ9NRL2 1556 aaPredicted RBP15.37■□□□□ 0.05
SHANK2-219ENST00000606715 CANXP27824 592 aaKnown RBP15.36■□□□□ 0.05
SHANK2-219ENST00000606715 CHGAP10645 457 aaKnown RBP15.34■□□□□ 0.05
SHANK2-219ENST00000606715 RTL5Q5HYW3 569 aaPredicted RBP15.32■□□□□ 0.04
SHANK2-219ENST00000606715 RSF1Q96T23 1441 aaPredicted RBP15.31■□□□□ 0.04
SHANK2-219ENST00000606715 EEA1Q15075 1411 aa15.3■□□□□ 0.04
SHANK2-219ENST00000606715 MYO15BQ96JP2 1530 aa15.28■□□□□ 0.04
SHANK2-219ENST00000606715 SCAF1Q9H7N4 1312 aaKnown RBP15.28■□□□□ 0.04
SHANK2-219ENST00000606715 A0A0G2JS52 829 aa15.24■□□□□ 0.03
SHANK2-219ENST00000606715 SMARCA2P51531 1590 aa15.22■□□□□ 0.03
SHANK2-219ENST00000606715 WRNQ14191 1432 aaPredicted RBP eCLIP15.17■□□□□ 0.02
SHANK2-219ENST00000606715 ACIN1Q9UKV3 1341 aaKnown RBP15.17■□□□□ 0.02
SHANK2-219ENST00000606715 PDS5BQ9NTI5 1447 aa15.17■□□□□ 0.02
SHANK2-219ENST00000606715 ANP32CO43423 234 aa15.16■□□□□ 0.02
SHANK2-219ENST00000606715 DIEXFQ68CQ4 756 aaKnown RBP15.16■□□□□ 0.02
SHANK2-219ENST00000606715 TSPY4P0CV99 314 aa15.15■□□□□ 0.02
SHANK2-219ENST00000606715 TSPY10P0CW01 314 aa15.15■□□□□ 0.02
SHANK2-219ENST00000606715 KIF27Q86VH2 1401 aa15.15■□□□□ 0.02
SHANK2-219ENST00000606715 MTUS2Q5JR59 1369 aa15.14■□□□□ 0.01
SHANK2-219ENST00000606715 NPM2Q86SE8 214 aaKnown RBP15.11■□□□□ 0.01
SHANK2-219ENST00000606715 CLIP1P30622 1438 aa15.09■□□□□ 0.01
SHANK2-219ENST00000606715 C14orf37Q86TY3 774 aa15.08■□□□□ 0
SHANK2-219ENST00000606715 GOLGA3Q08378 1498 aa15.08■□□□□ 0
SHANK2-219ENST00000606715 PLEKHD1A6NEE1 506 aa15.07■□□□□ 0
SHANK2-219ENST00000606715 CECR2Q9BXF3 1484 aa15.04■□□□□ -0
SHANK2-219ENST00000606715 PLEKHG5O94827 1062 aa15.04■□□□□ -0
SHANK2-219ENST00000606715 TONSLQ96HA7 1378 aa15.04■□□□□ -0
SHANK2-219ENST00000606715 ZBTB7CA1YPR0 619 aa15.04■□□□□ -0
SHANK2-219ENST00000606715 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.04■□□□□ -0
SHANK2-219ENST00000606715 HAP1P54257 671 aaPredicted RBP15.04■□□□□ -0
SHANK2-219ENST00000606715 ARID4BQ4LE39 1312 aaPredicted RBP15.01□□□□□ -0.01
SHANK2-219ENST00000606715 CEP164Q9UPV0 1460 aa15□□□□□ -0.01
SHANK2-219ENST00000606715 PPP1R15AO75807 674 aaPredicted RBP14.99□□□□□ -0.01
SHANK2-219ENST00000606715 KCNH8Q96L42 1107 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms