RNA–Protein interactions for RNA: ENST00000582331.2

CCDC47-205, Transcript of coiled-coil domain containing 47, humanhuman

TSL 3

Gene CCDC47, Length 693 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-205ENST00000582331 FAM50AQ14320 339 aaKnown RBP11.82□□□□□ -0.52
CCDC47-205ENST00000582331 DDX17Q92841 729 aaKnown RBP11.82□□□□□ -0.52
CCDC47-205ENST00000582331 USP21Q9UK80 565 aa11.8□□□□□ -0.52
CCDC47-205ENST00000582331 UNC13BO14795 1591 aa11.79□□□□□ -0.52
CCDC47-205ENST00000582331 TRPC5Q9UL62 973 aaPredicted RBP11.79□□□□□ -0.52
CCDC47-205ENST00000582331 E9PCH4 1651 aa11.78□□□□□ -0.52
CCDC47-205ENST00000582331 XRN1Q8IZH2 1706 aaKnown RBP11.77□□□□□ -0.52
CCDC47-205ENST00000582331 CCDC125Q86Z20 511 aa11.77□□□□□ -0.53
CCDC47-205ENST00000582331 FNBP4Q8N3X1 1017 aaPredicted RBP11.77□□□□□ -0.53
CCDC47-205ENST00000582331 AKT1S1Q96B36 256 aa11.77□□□□□ -0.53
CCDC47-205ENST00000582331 METP08581 1390 aa11.77□□□□□ -0.53
CCDC47-205ENST00000582331 ADGRL3Q9HAR2 1447 aa11.77□□□□□ -0.53
CCDC47-205ENST00000582331 ZNF326Q5BKZ1 582 aaKnown RBP11.76□□□□□ -0.53
CCDC47-205ENST00000582331 SETBP1Q9Y6X0 1596 aa11.75□□□□□ -0.53
CCDC47-205ENST00000582331 POTEHQ6S545 545 aa11.75□□□□□ -0.53
CCDC47-205ENST00000582331 SOS2Q07890 1332 aaPredicted RBP11.75□□□□□ -0.53
CCDC47-205ENST00000582331 NRXN3Q9Y4C0 1643 aa11.75□□□□□ -0.53
CCDC47-205ENST00000582331 NUP155O75694 1391 aa11.74□□□□□ -0.53
CCDC47-205ENST00000582331 PTCH1Q13635 1447 aa11.74□□□□□ -0.53
CCDC47-205ENST00000582331 C1orf167Q5SNV9 1468 aa11.74□□□□□ -0.53
CCDC47-205ENST00000582331 ATRNO75882 1429 aa11.73□□□□□ -0.53
CCDC47-205ENST00000582331 IQGAP3Q86VI3 1631 aa11.73□□□□□ -0.53
CCDC47-205ENST00000582331 ORAI2Q96SN7 254 aa11.73□□□□□ -0.53
CCDC47-205ENST00000582331 NALCNQ8IZF0 1738 aa11.72□□□□□ -0.53
CCDC47-205ENST00000582331 EP400Q96L91 3159 aa11.71□□□□□ -0.53
CCDC47-205ENST00000582331 LAMC1P11047 1609 aa11.71□□□□□ -0.54
CCDC47-205ENST00000582331 ROCK1Q13464 1354 aa11.7□□□□□ -0.54
CCDC47-205ENST00000582331 GJD4Q96KN9 370 aaPredicted RBP11.7□□□□□ -0.54
CCDC47-205ENST00000582331 BCL9LQ86UU0 1499 aa11.68□□□□□ -0.54
CCDC47-205ENST00000582331 COL22A1Q8NFW1 1626 aaPredicted RBP11.67□□□□□ -0.54
CCDC47-205ENST00000582331 ROBO2Q9HCK4 1378 aa11.67□□□□□ -0.54
CCDC47-205ENST00000582331 NPHP3Q7Z494 1330 aa11.66□□□□□ -0.54
CCDC47-205ENST00000582331 MYOM2P54296 1465 aa11.66□□□□□ -0.54
CCDC47-205ENST00000582331 ESCO1Q5FWF5 840 aa11.66□□□□□ -0.54
CCDC47-205ENST00000582331 BLMP54132 1417 aaPredicted RBP11.66□□□□□ -0.54
CCDC47-205ENST00000582331 SPHKAPQ2M3C7 1700 aa11.66□□□□□ -0.54
CCDC47-205ENST00000582331 NEXMIFQ5QGS0 1516 aa11.65□□□□□ -0.54
CCDC47-205ENST00000582331 SPDYE2BA6NHP3 402 aa11.65□□□□□ -0.54
CCDC47-205ENST00000582331 VGFO15240 615 aaPredicted RBP11.65□□□□□ -0.54
CCDC47-205ENST00000582331 SPDYE6P0CI01 402 aa11.65□□□□□ -0.54
CCDC47-205ENST00000582331 SF3B2Q13435 895 aaKnown RBP11.65□□□□□ -0.54
CCDC47-205ENST00000582331 SPDYE2Q495Y8 402 aa11.65□□□□□ -0.54
CCDC47-205ENST00000582331 DEFB132Q7Z7B7 95 aa11.65□□□□□ -0.54
CCDC47-205ENST00000582331 FOXO3O43524 673 aa11.64□□□□□ -0.55
CCDC47-205ENST00000582331 ITGAEP38570 1179 aa11.64□□□□□ -0.55
CCDC47-205ENST00000582331 CHRDL2Q6WN34 429 aa11.64□□□□□ -0.55
CCDC47-205ENST00000582331 UNC5CLQ8IV45 518 aa11.64□□□□□ -0.55
CCDC47-205ENST00000582331 HFM1A2PYH4 1435 aa11.63□□□□□ -0.55
CCDC47-205ENST00000582331 XPCQ01831 940 aaPredicted RBP11.63□□□□□ -0.55
CCDC47-205ENST00000582331 MKRN4PQ13434 485 aaPredicted RBP11.63□□□□□ -0.55
CCDC47-205ENST00000582331 MARF1Q9Y4F3 1742 aaKnown RBP11.62□□□□□ -0.55
CCDC47-205ENST00000582331 LRPPRCP42704 1394 aaKnown RBP11.62□□□□□ -0.55
CCDC47-205ENST00000582331 PXDNQ92626 1479 aa11.62□□□□□ -0.55
CCDC47-205ENST00000582331 REM2Q8IYK8 340 aaPredicted RBP11.61□□□□□ -0.55
CCDC47-205ENST00000582331 RALGAPBQ86X10 1494 aa11.61□□□□□ -0.55
CCDC47-205ENST00000582331 PRAG1Q86YV5 1406 aa11.6□□□□□ -0.55
CCDC47-205ENST00000582331 CLTCL1P53675 1640 aa11.6□□□□□ -0.55
CCDC47-205ENST00000582331 SEPT12Q8IYM1 358 aa11.6□□□□□ -0.55
CCDC47-205ENST00000582331 RPGRIP1LQ68CZ1 1315 aa11.6□□□□□ -0.55
CCDC47-205ENST00000582331 GLI3P10071 1580 aa11.59□□□□□ -0.55
CCDC47-205ENST00000582331 KIF1BO60333 1816 aa11.59□□□□□ -0.55
CCDC47-205ENST00000582331 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.59□□□□□ -0.55
CCDC47-205ENST00000582331 SLIT2O94813 1529 aa11.59□□□□□ -0.55
CCDC47-205ENST00000582331 LRP5O75197 1615 aa11.58□□□□□ -0.56
CCDC47-205ENST00000582331 NUTM2FA1L443 756 aa11.58□□□□□ -0.56
CCDC47-205ENST00000582331 SPATA31A3Q5VYP0 1347 aa11.58□□□□□ -0.56
CCDC47-205ENST00000582331 PSDA5PKW4 1024 aaPredicted RBP11.57□□□□□ -0.56
CCDC47-205ENST00000582331 ONECUT3O60422 494 aaPredicted RBP11.57□□□□□ -0.56
CCDC47-205ENST00000582331 HAP1P54257 671 aaPredicted RBP11.57□□□□□ -0.56
CCDC47-205ENST00000582331 VPS72Q15906 364 aa11.57□□□□□ -0.56
CCDC47-205ENST00000582331 KRT27Q7Z3Y8 459 aa11.57□□□□□ -0.56
CCDC47-205ENST00000582331 CCDC9Q9Y3X0 531 aaKnown RBP11.57□□□□□ -0.56
CCDC47-205ENST00000582331 CDC42BPGQ6DT37 1551 aa11.57□□□□□ -0.56
CCDC47-205ENST00000582331 BRWD3Q6RI45 1802 aa11.56□□□□□ -0.56
CCDC47-205ENST00000582331 BAG6P46379 1132 aa11.56□□□□□ -0.56
CCDC47-205ENST00000582331 NAIPQ13075 1403 aa11.56□□□□□ -0.56
CCDC47-205ENST00000582331 KRT28Q7Z3Y7 464 aa11.56□□□□□ -0.56
CCDC47-205ENST00000582331 STK26Q9P289 416 aa11.56□□□□□ -0.56
CCDC47-205ENST00000582331 HRCP23327 699 aa11.55□□□□□ -0.56
CCDC47-205ENST00000582331 WAPLQ7Z5K2 1190 aa11.55□□□□□ -0.56
CCDC47-205ENST00000582331 CCDC144AA2RUR9 1427 aa11.53□□□□□ -0.56
CCDC47-205ENST00000582331 A0A0G2JS52 829 aa11.53□□□□□ -0.56
CCDC47-205ENST00000582331 MYT1Q01538 1121 aa11.53□□□□□ -0.56
CCDC47-205ENST00000582331 PSME1Q06323 249 aa11.53□□□□□ -0.56
CCDC47-205ENST00000582331 CABLES1Q8TDN4 633 aa11.53□□□□□ -0.56
CCDC47-205ENST00000582331 USP32Q8NFA0 1604 aa11.53□□□□□ -0.56
CCDC47-205ENST00000582331 PLEKHG5O94827 1062 aa11.52□□□□□ -0.57
CCDC47-205ENST00000582331 ZNF692Q9BU19 519 aaPredicted RBP11.52□□□□□ -0.57
CCDC47-205ENST00000582331 PPLO60437 1756 aa11.5□□□□□ -0.57
CCDC47-205ENST00000582331 EN1Q05925 392 aaPredicted RBP11.5□□□□□ -0.57
CCDC47-205ENST00000582331 LMOD2Q6P5Q4 547 aa11.5□□□□□ -0.57
CCDC47-205ENST00000582331 PHF8Q9UPP1 1060 aa11.5□□□□□ -0.57
CCDC47-205ENST00000582331 ADGRF5Q8IZF2 1346 aa11.5□□□□□ -0.57
CCDC47-205ENST00000582331 ABCC11Q96J66 1382 aa11.5□□□□□ -0.57
CCDC47-205ENST00000582331 TECPR2O15040 1411 aa11.5□□□□□ -0.57
CCDC47-205ENST00000582331 KIF1AQ12756 1690 aa11.49□□□□□ -0.57
CCDC47-205ENST00000582331 FAM83GA6ND36 823 aa11.49□□□□□ -0.57
CCDC47-205ENST00000582331 R3HDM1Q15032 1099 aaKnown RBP11.49□□□□□ -0.57
CCDC47-205ENST00000582331 FAM98CQ17RN3 349 aaKnown RBP11.49□□□□□ -0.57
CCDC47-205ENST00000582331 TMEM132EQ6IEE7 984 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms