RNA–Protein interactions for RNA: ENST00000576713.6

NPLOC4-219, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-219ENST00000576713 TIE1P35590 1138 aa14.13□□□□□ -0.15
NPLOC4-219ENST00000576713 EFCAB3Q8N7B9 438 aa14.13□□□□□ -0.15
NPLOC4-219ENST00000576713 ADGRB3O60242 1522 aa14.13□□□□□ -0.15
NPLOC4-219ENST00000576713 RYDENQ9NUL5 291 aaKnown RBP14.12□□□□□ -0.15
NPLOC4-219ENST00000576713 TMEM131LA2VDJ0 1609 aa14.12□□□□□ -0.15
NPLOC4-219ENST00000576713 TRPM2O94759 1503 aa14.11□□□□□ -0.15
NPLOC4-219ENST00000576713 MPHOSPH9Q99550 1183 aa14.11□□□□□ -0.15
NPLOC4-219ENST00000576713 ARHGAP23Q9P227 1491 aa14.11□□□□□ -0.15
NPLOC4-219ENST00000576713 TSHZ2Q9NRE2 1034 aa14.1□□□□□ -0.15
NPLOC4-219ENST00000576713 MYO5BQ9ULV0 1848 aa14.1□□□□□ -0.15
NPLOC4-219ENST00000576713 SLIT1O75093 1534 aa14.1□□□□□ -0.15
NPLOC4-219ENST00000576713 MFRPQ9BY79 579 aa14.09□□□□□ -0.15
NPLOC4-219ENST00000576713 BMP2KQ9NSY1 1161 aaPredicted RBP14.09□□□□□ -0.15
NPLOC4-219ENST00000576713 KDM5AP29375 1690 aaKnown RBP14.09□□□□□ -0.15
NPLOC4-219ENST00000576713 POLR1AO95602 1720 aaPredicted RBP14.09□□□□□ -0.15
NPLOC4-219ENST00000576713 TTLL13PA6NNM8 815 aa14.08□□□□□ -0.16
NPLOC4-219ENST00000576713 LTKP29376 864 aa14.08□□□□□ -0.16
NPLOC4-219ENST00000576713 THEMISQ8N1K5 641 aaPredicted RBP14.08□□□□□ -0.16
NPLOC4-219ENST00000576713 SLC52A1Q9NWF4 448 aa14.08□□□□□ -0.16
NPLOC4-219ENST00000576713 SOX12O15370 315 aa14.07□□□□□ -0.16
NPLOC4-219ENST00000576713 TRIM26Q12899 539 aaPredicted RBP14.07□□□□□ -0.16
NPLOC4-219ENST00000576713 TMEM2Q9UHN6 1383 aa14.07□□□□□ -0.16
NPLOC4-219ENST00000576713 GABBR2O75899 941 aa14.06□□□□□ -0.16
NPLOC4-219ENST00000576713 FBXO41Q8TF61 875 aa14.06□□□□□ -0.16
NPLOC4-219ENST00000576713 ZFYVE9O95405 1425 aa14.06□□□□□ -0.16
NPLOC4-219ENST00000576713 LTBP4Q8N2S1 1624 aa14.05□□□□□ -0.16
NPLOC4-219ENST00000576713 VSIG10Q8N0Z9 540 aa14.05□□□□□ -0.16
NPLOC4-219ENST00000576713 CERKQ8TCT0 537 aa14.05□□□□□ -0.16
NPLOC4-219ENST00000576713 MED14O60244 1454 aa14.05□□□□□ -0.16
NPLOC4-219ENST00000576713 HRCP23327 699 aa14.04□□□□□ -0.16
NPLOC4-219ENST00000576713 SCAF11Q99590 1463 aaKnown RBP14.04□□□□□ -0.16
NPLOC4-219ENST00000576713 GOLGA2Q08379 1002 aa14.03□□□□□ -0.16
NPLOC4-219ENST00000576713 NPHP4O75161 1426 aaPredicted RBP14.03□□□□□ -0.16
NPLOC4-219ENST00000576713 IQGAP1P46940 1657 aa14.02□□□□□ -0.16
NPLOC4-219ENST00000576713 ANKLE2Q86XL3 938 aa14.02□□□□□ -0.17
NPLOC4-219ENST00000576713 FBXO22Q8NEZ5 403 aa14.02□□□□□ -0.17
NPLOC4-219ENST00000576713 PHF8Q9UPP1 1060 aa14.02□□□□□ -0.17
NPLOC4-219ENST00000576713 RIMS2Q9UQ26 1411 aa14.01□□□□□ -0.17
NPLOC4-219ENST00000576713 NLRP6P59044 892 aa14.01□□□□□ -0.17
NPLOC4-219ENST00000576713 NUTM2DQ5VT03 806 aaPredicted RBP14.01□□□□□ -0.17
NPLOC4-219ENST00000576713 TXNDC2Q86VQ3 553 aa14.01□□□□□ -0.17
NPLOC4-219ENST00000576713 NEXMIFQ5QGS0 1516 aa14□□□□□ -0.17
NPLOC4-219ENST00000576713 ANKRD30BQ9BXX2 1392 aa13.99□□□□□ -0.17
NPLOC4-219ENST00000576713 ZNF335Q9H4Z2 1342 aaPredicted RBP13.99□□□□□ -0.17
NPLOC4-219ENST00000576713 SPATA31E1Q6ZUB1 1445 aa13.98□□□□□ -0.17
NPLOC4-219ENST00000576713 MKRN3Q13064 507 aaKnown RBP13.98□□□□□ -0.17
NPLOC4-219ENST00000576713 TRIM35Q9UPQ4 493 aa13.98□□□□□ -0.17
NPLOC4-219ENST00000576713 KDM2AQ9Y2K7 1162 aa13.98□□□□□ -0.17
NPLOC4-219ENST00000576713 KIF1BO60333 1816 aa13.97□□□□□ -0.17
NPLOC4-219ENST00000576713 STRCP1A6NGW2 1772 aa13.97□□□□□ -0.17
NPLOC4-219ENST00000576713 CCDC144AA2RUR9 1427 aa13.97□□□□□ -0.17
NPLOC4-219ENST00000576713 ATMINO43313 823 aaPredicted RBP13.96□□□□□ -0.17
NPLOC4-219ENST00000576713 ATN1P54259 1190 aaPredicted RBP13.96□□□□□ -0.17
NPLOC4-219ENST00000576713 ASTLQ6HA08 431 aaPredicted RBP13.96□□□□□ -0.17
NPLOC4-219ENST00000576713 NRXN3Q9Y4C0 1643 aa13.96□□□□□ -0.17
NPLOC4-219ENST00000576713 ACIN1Q9UKV3 1341 aaKnown RBP13.95□□□□□ -0.18
NPLOC4-219ENST00000576713 IQSEC2Q5JU85 1478 aa13.95□□□□□ -0.18
NPLOC4-219ENST00000576713 SLC26A8Q96RN1 970 aa13.95□□□□□ -0.18
NPLOC4-219ENST00000576713 PLEKHG1Q9ULL1 1385 aa13.95□□□□□ -0.18
NPLOC4-219ENST00000576713 ADAMTS13Q76LX8 1427 aa13.94□□□□□ -0.18
NPLOC4-219ENST00000576713 EID1Q9Y6B2 187 aa13.94□□□□□ -0.18
NPLOC4-219ENST00000576713 DHX57Q6P158 1386 aaKnown RBP13.94□□□□□ -0.18
NPLOC4-219ENST00000576713 IFT172Q9UG01 1749 aa13.93□□□□□ -0.18
NPLOC4-219ENST00000576713 ZNF326Q5BKZ1 582 aaKnown RBP13.93□□□□□ -0.18
NPLOC4-219ENST00000576713 MS4A4AQ96JQ5 239 aa13.93□□□□□ -0.18
NPLOC4-219ENST00000576713 PCGF6Q9BYE7 350 aa13.93□□□□□ -0.18
NPLOC4-219ENST00000576713 PPLO60437 1756 aa13.93□□□□□ -0.18
NPLOC4-219ENST00000576713 PPP1R37O75864 691 aa13.92□□□□□ -0.18
NPLOC4-219ENST00000576713 RGL3Q3MIN7 710 aa13.92□□□□□ -0.18
NPLOC4-219ENST00000576713 SP7Q8TDD2 431 aaPredicted RBP13.91□□□□□ -0.18
NPLOC4-219ENST00000576713 SETBP1Q9Y6X0 1596 aa13.91□□□□□ -0.18
NPLOC4-219ENST00000576713 PPP1R15AO75807 674 aaPredicted RBP13.9□□□□□ -0.18
NPLOC4-219ENST00000576713 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.89□□□□□ -0.19
NPLOC4-219ENST00000576713 SETD1AO15047 1707 aaKnown RBP13.89□□□□□ -0.19
NPLOC4-219ENST00000576713 ADGRF5Q8IZF2 1346 aa13.89□□□□□ -0.19
NPLOC4-219ENST00000576713 DCBLD2Q96PD2 775 aa13.88□□□□□ -0.19
NPLOC4-219ENST00000576713 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.88□□□□□ -0.197e-8■■□□□ 12.6
NPLOC4-219ENST00000576713 CPS1P31327 1500 aa13.88□□□□□ -0.19
NPLOC4-219ENST00000576713 PTPRUQ92729 1446 aa13.88□□□□□ -0.19
NPLOC4-219ENST00000576713 SIN3AQ96ST3 1273 aa13.87□□□□□ -0.19
NPLOC4-219ENST00000576713 NWD1Q149M9 1564 aa13.87□□□□□ -0.19
NPLOC4-219ENST00000576713 METP08581 1390 aa13.86□□□□□ -0.19
NPLOC4-219ENST00000576713 BCANQ96GW7 911 aa13.86□□□□□ -0.19
NPLOC4-219ENST00000576713 DIP2AQ14689 1571 aa13.86□□□□□ -0.19
NPLOC4-219ENST00000576713 RPGRIP1LQ68CZ1 1315 aa13.86□□□□□ -0.19
NPLOC4-219ENST00000576713 LRRC7Q96NW7 1537 aa13.85□□□□□ -0.19
NPLOC4-219ENST00000576713 ASXL1Q8IXJ9 1541 aa13.85□□□□□ -0.19
NPLOC4-219ENST00000576713 ALKQ9UM73 1620 aa13.84□□□□□ -0.19
NPLOC4-219ENST00000576713 RBM33Q96EV2 1170 aaKnown RBP13.84□□□□□ -0.19
NPLOC4-219ENST00000576713 TBX22Q9Y458 520 aa13.84□□□□□ -0.19
NPLOC4-219ENST00000576713 CHD2O14647 1828 aaKnown RBP13.84□□□□□ -0.19
NPLOC4-219ENST00000576713 XIRP1Q702N8 1843 aaKnown RBP13.84□□□□□ -0.19
NPLOC4-219ENST00000576713 NRXN1Q9ULB1 1477 aa13.84□□□□□ -0.19
NPLOC4-219ENST00000576713 PIK3C2GO75747 1445 aa13.83□□□□□ -0.2
NPLOC4-219ENST00000576713 MYOM2P54296 1465 aa13.83□□□□□ -0.2
NPLOC4-219ENST00000576713 HDGFP51858 240 aaKnown RBP13.83□□□□□ -0.2
NPLOC4-219ENST00000576713 IER5LQ5T953 404 aa13.83□□□□□ -0.2
NPLOC4-219ENST00000576713 PELP1Q8IZL8 1130 aaKnown RBP13.83□□□□□ -0.2
NPLOC4-219ENST00000576713 XRN1Q8IZH2 1706 aaKnown RBP13.82□□□□□ -0.2
NPLOC4-219ENST00000576713 CADPS2Q86UW7 1296 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms