RNA–Protein interactions for RNA: ENST00000570415.5

ITGAE-203, Transcript of integrin subunit alpha E, humanhuman

TSL 3

Gene ITGAE, Length 1,115 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGAE-203ENST00000570415 ABCC1P33527 1531 aa16.03■□□□□ 0.16
ITGAE-203ENST00000570415 KIDINS220Q9ULH0 1771 aa16.02■□□□□ 0.15
ITGAE-203ENST00000570415 TRAPPC8Q9Y2L5 1435 aa16.02■□□□□ 0.15
ITGAE-203ENST00000570415 TULP1O00294 542 aaPredicted RBP16.01■□□□□ 0.15
ITGAE-203ENST00000570415 EFCAB2Q5VUJ9 269 aa16.01■□□□□ 0.15
ITGAE-203ENST00000570415 TROQ12816 1431 aaPredicted RBP16.01■□□□□ 0.15
ITGAE-203ENST00000570415 EN1Q05925 392 aaPredicted RBP16■□□□□ 0.15
ITGAE-203ENST00000570415 ADAM33Q9BZ11 813 aa16■□□□□ 0.15
ITGAE-203ENST00000570415 MYT1LQ9UL68 1186 aa16■□□□□ 0.15
ITGAE-203ENST00000570415 PTPRTO14522 1441 aa16■□□□□ 0.15
ITGAE-203ENST00000570415 RBM33Q96EV2 1170 aaKnown RBP15.99■□□□□ 0.15
ITGAE-203ENST00000570415 NCOA1Q15788 1441 aa15.99■□□□□ 0.15
ITGAE-203ENST00000570415 CAMSAP1Q5T5Y3 1602 aa15.98■□□□□ 0.15
ITGAE-203ENST00000570415 CDC42BPAQ5VT25 1732 aa15.98■□□□□ 0.15
ITGAE-203ENST00000570415 RBM26Q5T8P6 1007 aaKnown RBP15.97■□□□□ 0.15
ITGAE-203ENST00000570415 POTEGQ6S5H5 508 aa15.97■□□□□ 0.15
ITGAE-203ENST00000570415 AGLP35573 1532 aa15.97■□□□□ 0.15
ITGAE-203ENST00000570415 MLH3Q9UHC1 1453 aa15.97■□□□□ 0.15
ITGAE-203ENST00000570415 FMN1Q68DA7 1419 aa15.96■□□□□ 0.15
ITGAE-203ENST00000570415 POTEMA6NI47 508 aa15.96■□□□□ 0.15
ITGAE-203ENST00000570415 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.96■□□□□ 0.15
ITGAE-203ENST00000570415 BCL2L12Q9HB09 334 aa15.96■□□□□ 0.15
ITGAE-203ENST00000570415 SUPT6HQ7KZ85 1726 aaKnown RBP15.96■□□□□ 0.15
ITGAE-203ENST00000570415 SETD1BQ9UPS6 1966 aaKnown RBP15.95■□□□□ 0.14
ITGAE-203ENST00000570415 MYO3AQ8NEV4 1616 aa15.95■□□□□ 0.14
ITGAE-203ENST00000570415 MAP3K7O43318 606 aa15.95■□□□□ 0.14
ITGAE-203ENST00000570415 ZNF687Q8N1G0 1237 aa15.95■□□□□ 0.14
ITGAE-203ENST00000570415 CLTCQ00610 1675 aaKnown RBP15.95■□□□□ 0.14
ITGAE-203ENST00000570415 MROH2AA6NES4 1674 aa15.93■□□□□ 0.14
ITGAE-203ENST00000570415 SAMD9LQ8IVG5 1584 aa15.93■□□□□ 0.14
ITGAE-203ENST00000570415 LMOD2Q6P5Q4 547 aa15.93■□□□□ 0.14
ITGAE-203ENST00000570415 CLIP1P30622 1438 aa15.93■□□□□ 0.14
ITGAE-203ENST00000570415 TSR1Q2NL82 804 aaKnown RBP15.92■□□□□ 0.14
ITGAE-203ENST00000570415 ZNF335Q9H4Z2 1342 aaPredicted RBP15.92■□□□□ 0.14
ITGAE-203ENST00000570415 SYCP2Q9BX26 1530 aa15.91■□□□□ 0.14
ITGAE-203ENST00000570415 ZNF142P52746 1687 aaPredicted RBP15.91■□□□□ 0.14
ITGAE-203ENST00000570415 UBTFP17480 764 aaKnown RBP15.9■□□□□ 0.14
ITGAE-203ENST00000570415 C6orf132Q5T0Z8 1188 aa15.9■□□□□ 0.14
ITGAE-203ENST00000570415 POTEEQ6S8J3 1075 aa15.9■□□□□ 0.14
ITGAE-203ENST00000570415 IQSEC2Q5JU85 1478 aa15.9■□□□□ 0.14
ITGAE-203ENST00000570415 PTPREP23469 700 aa15.89■□□□□ 0.13
ITGAE-203ENST00000570415 CDHR5Q9HBB8 845 aa15.89■□□□□ 0.13
ITGAE-203ENST00000570415 KCNK17Q96T54 332 aa15.87■□□□□ 0.13
ITGAE-203ENST00000570415 CEP170BQ9Y4F5 1589 aaPredicted RBP15.87■□□□□ 0.13
ITGAE-203ENST00000570415 NUTM2FA1L443 756 aa15.86■□□□□ 0.13
ITGAE-203ENST00000570415 CDK11AQ9UQ88 783 aaPredicted RBP15.86■□□□□ 0.13
ITGAE-203ENST00000570415 AXIN2Q9Y2T1 843 aa15.86■□□□□ 0.13
ITGAE-203ENST00000570415 PLXNC1O60486 1568 aa15.86■□□□□ 0.13
ITGAE-203ENST00000570415 INO80Q9ULG1 1556 aaPredicted RBP15.86■□□□□ 0.13
ITGAE-203ENST00000570415 ARHGAP33O14559 1287 aa15.85■□□□□ 0.13
ITGAE-203ENST00000570415 PBX2P40425 430 aa15.85■□□□□ 0.13
ITGAE-203ENST00000570415 GPIHBP1Q8IV16 184 aa15.85■□□□□ 0.13
ITGAE-203ENST00000570415 ESF1Q9H501 851 aaKnown RBP15.85■□□□□ 0.13
ITGAE-203ENST00000570415 CNTLNQ9NXG0 1405 aa15.85■□□□□ 0.13
ITGAE-203ENST00000570415 ATP7AQ04656 1500 aa15.84■□□□□ 0.13
ITGAE-203ENST00000570415 PSEN2P49810 448 aa15.84■□□□□ 0.13
ITGAE-203ENST00000570415 UBAP1LF5GYI3 381 aa15.83■□□□□ 0.12
ITGAE-203ENST00000570415 NPATQ14207 1427 aa15.83■□□□□ 0.12
ITGAE-203ENST00000570415 MED1Q15648 1581 aaPredicted RBP15.83■□□□□ 0.12
ITGAE-203ENST00000570415 COL9A1P20849 921 aa15.82■□□□□ 0.12
ITGAE-203ENST00000570415 ZNF777Q9ULD5 760 aaPredicted RBP15.82■□□□□ 0.12
ITGAE-203ENST00000570415 ZMYM3Q14202 1370 aa15.82■□□□□ 0.12
ITGAE-203ENST00000570415 TCOF1Q13428 1488 aaKnown RBP15.82■□□□□ 0.12
ITGAE-203ENST00000570415 PPP1R3GB7ZBB8 358 aa15.81■□□□□ 0.12
ITGAE-203ENST00000570415 CCDC18Q5T9S5 1454 aa15.81■□□□□ 0.12
ITGAE-203ENST00000570415 CASKIN1Q8WXD9 1431 aa15.81■□□□□ 0.12
ITGAE-203ENST00000570415 PTPRKQ15262 1439 aa15.8■□□□□ 0.12
ITGAE-203ENST00000570415 NPDC1Q9NQX5 325 aaPredicted RBP15.8■□□□□ 0.12
ITGAE-203ENST00000570415 GPR37O15354 613 aa15.79■□□□□ 0.12
ITGAE-203ENST00000570415 HNRNPMP52272 730 aaKnown RBP eCLIP15.79■□□□□ 0.12
ITGAE-203ENST00000570415 PTGDRQ13258 359 aa15.79■□□□□ 0.12
ITGAE-203ENST00000570415 NEURL4Q96JN8 1562 aa15.79■□□□□ 0.12
ITGAE-203ENST00000570415 GPATCH8Q9UKJ3 1502 aaKnown RBP15.78■□□□□ 0.12
ITGAE-203ENST00000570415 PLA2R1Q13018 1463 aa15.78■□□□□ 0.12
ITGAE-203ENST00000570415 POLR1AO95602 1720 aaPredicted RBP15.78■□□□□ 0.12
ITGAE-203ENST00000570415 DMRTA1Q5VZB9 504 aa15.78■□□□□ 0.12
ITGAE-203ENST00000570415 CDAN1Q8IWY9 1227 aa15.78■□□□□ 0.12
ITGAE-203ENST00000570415 DNMT1P26358 1616 aaKnown RBP15.78■□□□□ 0.12
ITGAE-203ENST00000570415 A2MP01023 1474 aa15.78■□□□□ 0.12
ITGAE-203ENST00000570415 SPAG9O60271 1321 aaKnown RBP15.76■□□□□ 0.11
ITGAE-203ENST00000570415 FCHSD2O94868 740 aa15.76■□□□□ 0.11
ITGAE-203ENST00000570415 KRTAP3-3Q9BYR6 98 aa15.75■□□□□ 0.11
ITGAE-203ENST00000570415 KRTAP3-2Q9BYR7 98 aa15.75■□□□□ 0.11
ITGAE-203ENST00000570415 FYCO1Q9BQS8 1478 aa15.75■□□□□ 0.11
ITGAE-203ENST00000570415 ADGBQ8N7X0 1667 aa15.75■□□□□ 0.11
ITGAE-203ENST00000570415 ALKQ9UM73 1620 aa15.75■□□□□ 0.11
ITGAE-203ENST00000570415 HSPA1LP34931 641 aa15.74■□□□□ 0.11
ITGAE-203ENST00000570415 PIP4K2BP78356 416 aa15.73■□□□□ 0.11
ITGAE-203ENST00000570415 GGT6Q6P531 493 aa15.73■□□□□ 0.11
ITGAE-203ENST00000570415 ZBED2Q9BTP6 218 aa15.73■□□□□ 0.11
ITGAE-203ENST00000570415 LSM11P83369 360 aaKnown RBP eCLIP15.72■□□□□ 0.11
ITGAE-203ENST00000570415 ZC3H15Q8WU90 426 aaKnown RBP15.72■□□□□ 0.11
ITGAE-203ENST00000570415 TIAM1Q13009 1591 aa15.71■□□□□ 0.11
ITGAE-203ENST00000570415 HIC1Q14526 733 aa15.71■□□□□ 0.11
ITGAE-203ENST00000570415 A2ML1A8K2U0 1454 aa15.71■□□□□ 0.1
ITGAE-203ENST00000570415 ZNF644Q9H582 1327 aaPredicted RBP15.7■□□□□ 0.1
ITGAE-203ENST00000570415 PRSS12P56730 875 aa15.69■□□□□ 0.1
ITGAE-203ENST00000570415 PROX2Q3B8N5 592 aa15.69■□□□□ 0.1
ITGAE-203ENST00000570415 CDCA7LQ96GN5 454 aa15.69■□□□□ 0.1
ITGAE-203ENST00000570415 VWDEQ8N2E2 1590 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms