RNA–Protein interactions for RNA: ENST00000558535.1

IDH3A-206, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 1 (best)

Gene IDH3A, Length 2,586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-206ENST00000558535 TNRQ92752 1358 aa8.34□□□□□ -1.07
IDH3A-206ENST00000558535 ERBINQ96RT1 1412 aa8.34□□□□□ -1.07
IDH3A-206ENST00000558535 CNPY4Q8N129 248 aa8.34□□□□□ -1.07
IDH3A-206ENST00000558535 DNAJC2Q99543 621 aaKnown RBP8.34□□□□□ -1.07
IDH3A-206ENST00000558535 KIF3BO15066 747 aa8.33□□□□□ -1.08
IDH3A-206ENST00000558535 ARHGAP31Q2M1Z3 1444 aa8.32□□□□□ -1.08
IDH3A-206ENST00000558535 NFKBIBQ15653 356 aa8.32□□□□□ -1.08
IDH3A-206ENST00000558535 LTBP4Q8N2S1 1624 aa8.32□□□□□ -1.08
IDH3A-206ENST00000558535 GEMIN8Q9NWZ8 242 aaKnown RBP8.31□□□□□ -1.08
IDH3A-206ENST00000558535 SPATA31D1Q6ZQQ2 1576 aa8.31□□□□□ -1.08
IDH3A-206ENST00000558535 THEMISQ8N1K5 641 aaPredicted RBP8.31□□□□□ -1.08
IDH3A-206ENST00000558535 ZNF830Q96NB3 372 aaPredicted RBP8.31□□□□□ -1.08
IDH3A-206ENST00000558535 HDAC5Q9UQL6 1122 aa8.31□□□□□ -1.08
IDH3A-206ENST00000558535 ABCC3O15438 1527 aa8.31□□□□□ -1.08
IDH3A-206ENST00000558535 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.3□□□□□ -1.08
IDH3A-206ENST00000558535 DNMT1P26358 1616 aaKnown RBP8.3□□□□□ -1.08
IDH3A-206ENST00000558535 CPS1P31327 1500 aa8.3□□□□□ -1.08
IDH3A-206ENST00000558535 PRDM15P57071 1507 aaPredicted RBP8.3□□□□□ -1.08
IDH3A-206ENST00000558535 KANK4Q5T7N3 995 aaPredicted RBP8.3□□□□□ -1.08
IDH3A-206ENST00000558535 DEPDC5O75140 1603 aa8.3□□□□□ -1.08
IDH3A-206ENST00000558535 FGD6Q6ZV73 1430 aa8.3□□□□□ -1.08
IDH3A-206ENST00000558535 MED14O60244 1454 aa8.29□□□□□ -1.08
IDH3A-206ENST00000558535 PTPN23Q9H3S7 1636 aa8.29□□□□□ -1.08
IDH3A-206ENST00000558535 WWC1Q8IX03 1113 aa8.29□□□□□ -1.08
IDH3A-206ENST00000558535 KANK1Q14678 1352 aa8.29□□□□□ -1.08
IDH3A-206ENST00000558535 ANKRD30AQ9BXX3 1397 aa8.29□□□□□ -1.08
IDH3A-206ENST00000558535 CROCC2H7BZ55 1655 aa8.29□□□□□ -1.08
IDH3A-206ENST00000558535 ABCC5O15440 1437 aa8.29□□□□□ -1.08
IDH3A-206ENST00000558535 DAPK1P53355 1430 aa8.29□□□□□ -1.08
IDH3A-206ENST00000558535 NBPF20Q3BBV1 942 aa8.29□□□□□ -1.08
IDH3A-206ENST00000558535 PSMD1Q99460 953 aa8.29□□□□□ -1.08
IDH3A-206ENST00000558535 LMTK2Q8IWU2 1503 aa8.29□□□□□ -1.08
IDH3A-206ENST00000558535 KIF15Q9NS87 1388 aa8.29□□□□□ -1.08
IDH3A-206ENST00000558535 APPP05067 770 aa8.28□□□□□ -1.08
IDH3A-206ENST00000558535 DNTTIP2Q5QJE6 756 aaKnown RBP8.28□□□□□ -1.08
IDH3A-206ENST00000558535 ANKLE2Q86XL3 938 aa8.28□□□□□ -1.08
IDH3A-206ENST00000558535 ADGRL2O95490 1459 aa8.28□□□□□ -1.08
IDH3A-206ENST00000558535 ERVK-7P63135 1459 aa8.28□□□□□ -1.08
IDH3A-206ENST00000558535 RALBP1Q15311 655 aa8.28□□□□□ -1.08
IDH3A-206ENST00000558535 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.28□□□□□ -1.08
IDH3A-206ENST00000558535 DCAF11Q8TEB1 546 aa8.27□□□□□ -1.08
IDH3A-206ENST00000558535 UGGT1Q9NYU2 1555 aa8.27□□□□□ -1.09
IDH3A-206ENST00000558535 MROH1Q8NDA8 1641 aa8.27□□□□□ -1.09
IDH3A-206ENST00000558535 CC2D1BQ5T0F9 858 aaKnown RBP8.27□□□□□ -1.09
IDH3A-206ENST00000558535 SENP3Q9H4L4 574 aaPredicted RBP8.26□□□□□ -1.09
IDH3A-206ENST00000558535 POLR1AO95602 1720 aaPredicted RBP8.26□□□□□ -1.09
IDH3A-206ENST00000558535 NCKAP5LQ9HCH0 1330 aa8.26□□□□□ -1.09
IDH3A-206ENST00000558535 ANP32CO43423 234 aa8.26□□□□□ -1.09
IDH3A-206ENST00000558535 PSEN1P49768 467 aa8.26□□□□□ -1.09
IDH3A-206ENST00000558535 KDM5AP29375 1690 aaKnown RBP8.25□□□□□ -1.09
IDH3A-206ENST00000558535 DYNC1I1O14576 645 aa8.25□□□□□ -1.09
IDH3A-206ENST00000558535 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.25□□□□□ -1.09
IDH3A-206ENST00000558535 NPHP4O75161 1426 aaPredicted RBP8.25□□□□□ -1.09
IDH3A-206ENST00000558535 RPRD2Q5VT52 1461 aaKnown RBP8.25□□□□□ -1.09
IDH3A-206ENST00000558535 VWDEQ8N2E2 1590 aa8.25□□□□□ -1.09
IDH3A-206ENST00000558535 NEURL4Q96JN8 1562 aa8.25□□□□□ -1.09
IDH3A-206ENST00000558535 ESPNB1AK53 854 aa8.24□□□□□ -1.09
IDH3A-206ENST00000558535 CCDC94Q9BW85 323 aaPredicted RBP8.24□□□□□ -1.09
IDH3A-206ENST00000558535 FBXO31Q5XUX0 539 aaPredicted RBP8.24□□□□□ -1.09
IDH3A-206ENST00000558535 SLIT1O75093 1534 aa8.24□□□□□ -1.09
IDH3A-206ENST00000558535 ARHGAP23Q9P227 1491 aa8.23□□□□□ -1.09
IDH3A-206ENST00000558535 ROCK1Q13464 1354 aa8.23□□□□□ -1.09
IDH3A-206ENST00000558535 ZSCAN20P17040 1043 aaPredicted RBP8.23□□□□□ -1.09
IDH3A-206ENST00000558535 CC2D2BQ6DHV5 1058 aa8.23□□□□□ -1.09
IDH3A-206ENST00000558535 PPP4R3CPQ6ZMV5 832 aa8.23□□□□□ -1.09
IDH3A-206ENST00000558535 EFCC1Q9HA90 598 aa8.23□□□□□ -1.09
IDH3A-206ENST00000558535 ZBED9Q6R2W3 1325 aa8.23□□□□□ -1.09
IDH3A-206ENST00000558535 SYNMO15061 1565 aa8.23□□□□□ -1.09
IDH3A-206ENST00000558535 MRE11P49959 708 aa8.22□□□□□ -1.09
IDH3A-206ENST00000558535 OFD1O75665 1012 aa8.22□□□□□ -1.09
IDH3A-206ENST00000558535 ZNF335Q9H4Z2 1342 aaPredicted RBP8.22□□□□□ -1.09
IDH3A-206ENST00000558535 CFAP65Q6ZU64 1925 aaKnown RBP8.22□□□□□ -1.09
IDH3A-206ENST00000558535 SCAF11Q99590 1463 aaKnown RBP8.22□□□□□ -1.09
IDH3A-206ENST00000558535 HSP90AB3PQ58FF7 597 aa8.21□□□□□ -1.09
IDH3A-206ENST00000558535 SLC52A1Q9NWF4 448 aa8.21□□□□□ -1.09
IDH3A-206ENST00000558535 CCDC66A2RUB6 948 aa8.21□□□□□ -1.1
IDH3A-206ENST00000558535 TOM1O60784 492 aa8.21□□□□□ -1.1
IDH3A-206ENST00000558535 RRP7BPQ9NSQ0 103 aa8.21□□□□□ -1.1
IDH3A-206ENST00000558535 EID1Q9Y6B2 187 aa8.21□□□□□ -1.1
IDH3A-206ENST00000558535 NINLQ9Y2I6 1382 aa8.21□□□□□ -1.1
IDH3A-206ENST00000558535 IQGAP1P46940 1657 aa8.21□□□□□ -1.1
IDH3A-206ENST00000558535 EFCAB6Q5THR3 1501 aa8.2□□□□□ -1.1
IDH3A-206ENST00000558535 NOS1P29475 1434 aa8.2□□□□□ -1.1
IDH3A-206ENST00000558535 RNF123Q5XPI4 1314 aa8.2□□□□□ -1.1
IDH3A-206ENST00000558535 FSD2A1L4K1 749 aa8.2□□□□□ -1.1
IDH3A-206ENST00000558535 PATL2C9JE40 543 aaKnown RBP8.2□□□□□ -1.1
IDH3A-206ENST00000558535 CTR9Q6PD62 1173 aa8.2□□□□□ -1.1
IDH3A-206ENST00000558535 CREBRFQ8IUR6 639 aa8.2□□□□□ -1.1
IDH3A-206ENST00000558535 ANKRD50Q9ULJ7 1429 aa8.2□□□□□ -1.1
IDH3A-206ENST00000558535 ZNF592Q92610 1267 aa8.2□□□□□ -1.1
IDH3A-206ENST00000558535 CARD10Q9BWT7 1032 aa8.2□□□□□ -1.1
IDH3A-206ENST00000558535 BACH2Q9BYV9 841 aa8.2□□□□□ -1.1
IDH3A-206ENST00000558535 KCNG1Q9UIX4 513 aa8.2□□□□□ -1.1
IDH3A-206ENST00000558535 CEP152O94986 1710 aa8.2□□□□□ -1.1
IDH3A-206ENST00000558535 UBR1Q8IWV7 1749 aa8.2□□□□□ -1.1
IDH3A-206ENST00000558535 MAFGO15525 162 aa8.19□□□□□ -1.1
IDH3A-206ENST00000558535 HDGFP51858 240 aaKnown RBP8.19□□□□□ -1.1
IDH3A-206ENST00000558535 HS1BP3Q53T59 392 aa8.19□□□□□ -1.1
IDH3A-206ENST00000558535 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.19□□□□□ -1.1
IDH3A-206ENST00000558535 RBM28Q9NW13 759 aaKnown RBP8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms