RNA–Protein interactions for RNA: ENST00000543898.5

ABCB1-210, Transcript of ATP binding cassette subfamily B member 1, humanhuman

TSL 5 BASIC

Gene ABCB1, Length 4,524 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-210ENST00000543898 RIPK4P57078 832 aa10.63□□□□□ -0.71
ABCB1-210ENST00000543898 KIAA0586Q9BVV6 1533 aa10.63□□□□□ -0.71
ABCB1-210ENST00000543898 TPM2P07951 284 aa10.63□□□□□ -0.71
ABCB1-210ENST00000543898 TMEM132EQ6IEE7 984 aa10.63□□□□□ -0.71
ABCB1-210ENST00000543898 NAP1L2Q9ULW6 460 aaPredicted RBP10.63□□□□□ -0.71
ABCB1-210ENST00000543898 KDM5CP41229 1560 aa10.62□□□□□ -0.71
ABCB1-210ENST00000543898 BLMP54132 1417 aaPredicted RBP10.62□□□□□ -0.71
ABCB1-210ENST00000543898 KANK1Q14678 1352 aa10.62□□□□□ -0.71
ABCB1-210ENST00000543898 RNF214Q8ND24 703 aa10.62□□□□□ -0.71
ABCB1-210ENST00000543898 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.62□□□□□ -0.71
ABCB1-210ENST00000543898 STAG3Q9UJ98 1225 aa10.62□□□□□ -0.71
ABCB1-210ENST00000543898 KIF14Q15058 1648 aa10.62□□□□□ -0.71
ABCB1-210ENST00000543898 ZMYM4Q5VZL5 1548 aa10.62□□□□□ -0.71
ABCB1-210ENST00000543898 GGT6Q6P531 493 aa10.62□□□□□ -0.71
ABCB1-210ENST00000543898 NUP153P49790 1475 aaKnown RBP10.61□□□□□ -0.71
ABCB1-210ENST00000543898 MPNDQ8N594 471 aa10.61□□□□□ -0.71
ABCB1-210ENST00000543898 DNMT1P26358 1616 aaKnown RBP10.61□□□□□ -0.71
ABCB1-210ENST00000543898 SAMD9Q5K651 1589 aa10.61□□□□□ -0.71
ABCB1-210ENST00000543898 BRD2P25440 801 aaKnown RBP10.61□□□□□ -0.71
ABCB1-210ENST00000543898 CCDC173Q0VFZ6 552 aa10.61□□□□□ -0.71
ABCB1-210ENST00000543898 WDR63Q8IWG1 891 aa10.61□□□□□ -0.71
ABCB1-210ENST00000543898 NINLQ9Y2I6 1382 aa10.61□□□□□ -0.71
ABCB1-210ENST00000543898 USP19O94966 1318 aa10.6□□□□□ -0.71
ABCB1-210ENST00000543898 ATF7IPQ6VMQ6 1270 aa10.6□□□□□ -0.71
ABCB1-210ENST00000543898 SSFA2P28290 1259 aa10.6□□□□□ -0.71
ABCB1-210ENST00000543898 TMEM57Q8N5G2 664 aa10.6□□□□□ -0.71
ABCB1-210ENST00000543898 GGNBP2Q9H3C7 697 aa10.6□□□□□ -0.71
ABCB1-210ENST00000543898 PRPF40AO75400 957 aaKnown RBP10.6□□□□□ -0.71
ABCB1-210ENST00000543898 PTPRGP23470 1445 aa10.6□□□□□ -0.71
ABCB1-210ENST00000543898 SSH1Q8WYL5 1049 aa10.59□□□□□ -0.71
ABCB1-210ENST00000543898 ISY1Q9ULR0 285 aaKnown RBP10.59□□□□□ -0.71
ABCB1-210ENST00000543898 K7ELQ4 463 aaPredicted RBP10.59□□□□□ -0.71
ABCB1-210ENST00000543898 AFAP1Q8N556 730 aa10.59□□□□□ -0.71
ABCB1-210ENST00000543898 ZSCAN30Q86W11 494 aa10.59□□□□□ -0.71
ABCB1-210ENST00000543898 ST18O60284 1047 aa10.58□□□□□ -0.72
ABCB1-210ENST00000543898 KIAA2012Q0VF49 1180 aa10.58□□□□□ -0.72
ABCB1-210ENST00000543898 CHD1LQ86WJ1 897 aa10.58□□□□□ -0.72
ABCB1-210ENST00000543898 ANTXR1Q9H6X2 564 aa10.58□□□□□ -0.72
ABCB1-210ENST00000543898 TRIM27P14373 513 aa10.58□□□□□ -0.72
ABCB1-210ENST00000543898 WDR62O43379 1518 aa10.58□□□□□ -0.72
ABCB1-210ENST00000543898 LAMC3Q9Y6N6 1575 aa10.58□□□□□ -0.72
ABCB1-210ENST00000543898 RBM42Q9BTD8 480 aaKnown RBP10.58□□□□□ -0.72
ABCB1-210ENST00000543898 COL17A1Q9UMD9 1497 aaPredicted RBP10.57□□□□□ -0.72
ABCB1-210ENST00000543898 XPCQ01831 940 aaPredicted RBP10.57□□□□□ -0.72
ABCB1-210ENST00000543898 PLCD3Q8N3E9 789 aa10.57□□□□□ -0.72
ABCB1-210ENST00000543898 ABCA5Q8WWZ7 1642 aa10.57□□□□□ -0.72
ABCB1-210ENST00000543898 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.57□□□□□ -0.72
ABCB1-210ENST00000543898 CABP2Q9NPB3 220 aa10.57□□□□□ -0.72
ABCB1-210ENST00000543898 ARHGEF12Q9NZN5 1544 aa10.57□□□□□ -0.72
ABCB1-210ENST00000543898 NUCB2P80303 420 aa10.56□□□□□ -0.72
ABCB1-210ENST00000543898 CARD14Q9BXL6 1004 aa10.56□□□□□ -0.72
ABCB1-210ENST00000543898 CIZ1Q9ULV3 898 aaPredicted RBP10.56□□□□□ -0.72
ABCB1-210ENST00000543898 ZNF521Q96K83 1311 aa10.56□□□□□ -0.72
ABCB1-210ENST00000543898 MBD5Q9P267 1494 aa10.56□□□□□ -0.72
ABCB1-210ENST00000543898 ERCC6Q03468 1493 aa10.56□□□□□ -0.72
ABCB1-210ENST00000543898 KIF16BQ96L93 1317 aa10.56□□□□□ -0.72
ABCB1-210ENST00000543898 DNAJC5Q9H3Z4 198 aa10.56□□□□□ -0.72
ABCB1-210ENST00000543898 APPP05067 770 aa10.56□□□□□ -0.72
ABCB1-210ENST00000543898 PDCL3Q9H2J4 239 aa10.55□□□□□ -0.72
ABCB1-210ENST00000543898 CDC45O75419 566 aa10.55□□□□□ -0.72
ABCB1-210ENST00000543898 UQCRHLA0A096LP55 91 aa10.55□□□□□ -0.72
ABCB1-210ENST00000543898 UQCRHP07919 91 aa10.55□□□□□ -0.72
ABCB1-210ENST00000543898 HMOX1P09601 288 aa10.55□□□□□ -0.72
ABCB1-210ENST00000543898 MAGI1Q96QZ7 1491 aaPredicted RBP10.54□□□□□ -0.72
ABCB1-210ENST00000543898 GAS2L3Q86XJ1 694 aa10.54□□□□□ -0.72
ABCB1-210ENST00000543898 NSD3Q9BZ95 1437 aa10.54□□□□□ -0.72
ABCB1-210ENST00000543898 FSD2A1L4K1 749 aa10.54□□□□□ -0.72
ABCB1-210ENST00000543898 DIAPH1O60610 1272 aaKnown RBP10.54□□□□□ -0.72
ABCB1-210ENST00000543898 SLC4A10Q6U841 1118 aa10.54□□□□□ -0.72
ABCB1-210ENST00000543898 TRMT2AQ8IZ69 625 aaKnown RBP10.54□□□□□ -0.72
ABCB1-210ENST00000543898 SOX12O15370 315 aa10.54□□□□□ -0.72
ABCB1-210ENST00000543898 ARHGAP5Q13017 1502 aa10.54□□□□□ -0.72
ABCB1-210ENST00000543898 TRIM6-TRIM34B2RNG4 842 aa10.53□□□□□ -0.72
ABCB1-210ENST00000543898 TMPOP42166 694 aaKnown RBP10.53□□□□□ -0.72
ABCB1-210ENST00000543898 CHAF1AQ13111 956 aaPredicted RBP10.53□□□□□ -0.72
ABCB1-210ENST00000543898 SYAP1Q96A49 352 aaPredicted RBP10.53□□□□□ -0.72
ABCB1-210ENST00000543898 CFAP44Q96MT7 982 aa10.53□□□□□ -0.72
ABCB1-210ENST00000543898 PRDM10Q9NQV6 1147 aa10.53□□□□□ -0.72
ABCB1-210ENST00000543898 EVC2Q86UK5 1308 aa10.53□□□□□ -0.72
ABCB1-210ENST00000543898 A2MP01023 1474 aa10.52□□□□□ -0.72
ABCB1-210ENST00000543898 CCDC141Q6ZP82 1450 aa10.52□□□□□ -0.72
ABCB1-210ENST00000543898 HDGFL2Q7Z4V5 671 aaPredicted RBP10.52□□□□□ -0.72
ABCB1-210ENST00000543898 STAC3Q96MF2 364 aa10.52□□□□□ -0.72
ABCB1-210ENST00000543898 ASXL1Q8IXJ9 1541 aa10.52□□□□□ -0.72
ABCB1-210ENST00000543898 BAG4O95429 457 aaKnown RBP10.52□□□□□ -0.73
ABCB1-210ENST00000543898 MCCP23508 829 aa10.52□□□□□ -0.73
ABCB1-210ENST00000543898 CSPP1Q1MSJ5 1256 aa10.52□□□□□ -0.73
ABCB1-210ENST00000543898 FAM135AQ9P2D6 1515 aa10.52□□□□□ -0.73
ABCB1-210ENST00000543898 ADGRF5Q8IZF2 1346 aa10.52□□□□□ -0.73
ABCB1-210ENST00000543898 MINK1Q8N4C8 1332 aaPredicted RBP10.52□□□□□ -0.73
ABCB1-210ENST00000543898 ZNF608Q9ULD9 1512 aaPredicted RBP10.52□□□□□ -0.73
ABCB1-210ENST00000543898 PATL2C9JE40 543 aaKnown RBP10.52□□□□□ -0.73
ABCB1-210ENST00000543898 TERF2IPQ9NYB0 399 aa10.52□□□□□ -0.73
ABCB1-210ENST00000543898 THUMPD2Q9BTF0 503 aaKnown RBP10.52□□□□□ -0.73
ABCB1-210ENST00000543898 MAGI2Q86UL8 1455 aa10.51□□□□□ -0.73
ABCB1-210ENST00000543898 GPRASP1Q5JY77 1395 aa10.51□□□□□ -0.73
ABCB1-210ENST00000543898 LRRIQ1Q96JM4 1722 aa10.51□□□□□ -0.73
ABCB1-210ENST00000543898 SYCE3A1L190 88 aa10.51□□□□□ -0.73
ABCB1-210ENST00000543898 TBC1D9Q6ZT07 1266 aa10.51□□□□□ -0.73
ABCB1-210ENST00000543898 RBM27Q9P2N5 1060 aaKnown RBP10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms