RNA–Protein interactions for RNA: ENST00000543604.1

AC053513.1-201, humanhuman

TSL 3 BASIC

Gene AC053513.1, Length 738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC053513.1-201ENST00000543604 MFSD10Q14728 455 aa12.94□□□□□ -0.34
AC053513.1-201ENST00000543604 UPF1Q92900 1129 aaKnown RBP eCLIP12.94□□□□□ -0.34
AC053513.1-201ENST00000543604 GPATCH8Q9UKJ3 1502 aaKnown RBP12.93□□□□□ -0.34
AC053513.1-201ENST00000543604 SYCP2Q9BX26 1530 aa12.93□□□□□ -0.34
AC053513.1-201ENST00000543604 LHX6Q9UPM6 363 aa12.92□□□□□ -0.34
AC053513.1-201ENST00000543604 CEP170BQ9Y4F5 1589 aaPredicted RBP12.92□□□□□ -0.34
AC053513.1-201ENST00000543604 CCNB3Q8WWL7 1395 aa12.92□□□□□ -0.34
AC053513.1-201ENST00000543604 FYCO1Q9BQS8 1478 aa12.91□□□□□ -0.34
AC053513.1-201ENST00000543604 ATP7AQ04656 1500 aa12.91□□□□□ -0.34
AC053513.1-201ENST00000543604 ANKLE2Q86XL3 938 aa12.9□□□□□ -0.34
AC053513.1-201ENST00000543604 OXER1Q8TDS5 423 aa12.9□□□□□ -0.34
AC053513.1-201ENST00000543604 KRTAP3-3Q9BYR6 98 aa12.9□□□□□ -0.34
AC053513.1-201ENST00000543604 KRTAP3-2Q9BYR7 98 aa12.9□□□□□ -0.34
AC053513.1-201ENST00000543604 A2ML1A8K2U0 1454 aa12.9□□□□□ -0.34
AC053513.1-201ENST00000543604 MYO3AQ8NEV4 1616 aa12.89□□□□□ -0.35
AC053513.1-201ENST00000543604 TBC1D12O60347 775 aa12.89□□□□□ -0.35
AC053513.1-201ENST00000543604 PLXNC1O60486 1568 aa12.89□□□□□ -0.35
AC053513.1-201ENST00000543604 CPS1P31327 1500 aa12.88□□□□□ -0.35
AC053513.1-201ENST00000543604 THEMISQ8N1K5 641 aaPredicted RBP12.88□□□□□ -0.35
AC053513.1-201ENST00000543604 ZNF142P52746 1687 aaPredicted RBP12.88□□□□□ -0.35
AC053513.1-201ENST00000543604 CDC42BPAQ5VT25 1732 aa12.88□□□□□ -0.35
AC053513.1-201ENST00000543604 LRRIQ1Q96JM4 1722 aa12.88□□□□□ -0.35
AC053513.1-201ENST00000543604 SHANK2Q9UPX8 1470 aa12.87□□□□□ -0.35
AC053513.1-201ENST00000543604 MTUS2Q5JR59 1369 aa12.87□□□□□ -0.35
AC053513.1-201ENST00000543604 TNRQ92752 1358 aa12.87□□□□□ -0.35
AC053513.1-201ENST00000543604 ZNF687Q8N1G0 1237 aa12.87□□□□□ -0.35
AC053513.1-201ENST00000543604 SUPT6HQ7KZ85 1726 aaKnown RBP12.87□□□□□ -0.35
AC053513.1-201ENST00000543604 CLTCQ00610 1675 aaKnown RBP12.86□□□□□ -0.35
AC053513.1-201ENST00000543604 DHX29Q7Z478 1369 aaKnown RBP12.86□□□□□ -0.35
AC053513.1-201ENST00000543604 WASHC2CQ9Y4E1 1318 aa12.86□□□□□ -0.35
AC053513.1-201ENST00000543604 KIF3BO15066 747 aa12.85□□□□□ -0.35
AC053513.1-201ENST00000543604 FBXO31Q5XUX0 539 aaPredicted RBP12.85□□□□□ -0.35
AC053513.1-201ENST00000543604 RTEL1-TNFRSF6BF6WH68 1400 aa12.85□□□□□ -0.35
AC053513.1-201ENST00000543604 INO80Q9ULG1 1556 aaPredicted RBP12.85□□□□□ -0.35
AC053513.1-201ENST00000543604 EMILIN3Q9NT22 766 aa12.84□□□□□ -0.35
AC053513.1-201ENST00000543604 MED1Q15648 1581 aaPredicted RBP12.84□□□□□ -0.35
AC053513.1-201ENST00000543604 ZNF644Q9H582 1327 aaPredicted RBP12.84□□□□□ -0.35
AC053513.1-201ENST00000543604 RSPH4AQ5TD94 716 aa12.83□□□□□ -0.36
AC053513.1-201ENST00000543604 DNMT1P26358 1616 aaKnown RBP12.83□□□□□ -0.36
AC053513.1-201ENST00000543604 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.82□□□□□ -0.36
AC053513.1-201ENST00000543604 MIA2Q96PC5 1412 aa12.81□□□□□ -0.36
AC053513.1-201ENST00000543604 PZPP20742 1482 aa12.81□□□□□ -0.36
AC053513.1-201ENST00000543604 MBD5Q9P267 1494 aa12.81□□□□□ -0.36
AC053513.1-201ENST00000543604 NLRP1Q9C000 1473 aa12.8□□□□□ -0.36
AC053513.1-201ENST00000543604 FAM135AQ9P2D6 1515 aa12.8□□□□□ -0.36
AC053513.1-201ENST00000543604 NPHP4O75161 1426 aaPredicted RBP12.79□□□□□ -0.36
AC053513.1-201ENST00000543604 MAP3K9P80192 1104 aa12.79□□□□□ -0.36
AC053513.1-201ENST00000543604 SPNS2Q8IVW8 549 aa12.79□□□□□ -0.36
AC053513.1-201ENST00000543604 ADGBQ8N7X0 1667 aa12.79□□□□□ -0.36
AC053513.1-201ENST00000543604 TSHZ2Q9NRE2 1034 aa12.78□□□□□ -0.36
AC053513.1-201ENST00000543604 MED14O60244 1454 aa12.78□□□□□ -0.36
AC053513.1-201ENST00000543604 KDM5DQ9BY66 1539 aa12.78□□□□□ -0.36
AC053513.1-201ENST00000543604 NEURL4Q96JN8 1562 aa12.77□□□□□ -0.36
AC053513.1-201ENST00000543604 TSPY4P0CV99 314 aa12.77□□□□□ -0.37
AC053513.1-201ENST00000543604 TSPY10P0CW01 314 aa12.77□□□□□ -0.37
AC053513.1-201ENST00000543604 UGGT1Q9NYU2 1555 aa12.77□□□□□ -0.37
AC053513.1-201ENST00000543604 EVI5O60447 810 aa12.76□□□□□ -0.37
AC053513.1-201ENST00000543604 CAMK2BQ13554 666 aa12.76□□□□□ -0.37
AC053513.1-201ENST00000543604 POTEEQ6S8J3 1075 aa12.76□□□□□ -0.37
AC053513.1-201ENST00000543604 CEP162Q5TB80 1403 aa12.75□□□□□ -0.37
AC053513.1-201ENST00000543604 VWDEQ8N2E2 1590 aa12.75□□□□□ -0.37
AC053513.1-201ENST00000543604 AXIN2Q9Y2T1 843 aa12.75□□□□□ -0.37
AC053513.1-201ENST00000543604 CCDC141Q6ZP82 1450 aa12.74□□□□□ -0.37
AC053513.1-201ENST00000543604 PSDA5PKW4 1024 aaPredicted RBP12.74□□□□□ -0.37
AC053513.1-201ENST00000543604 POLR1AO95602 1720 aaPredicted RBP12.73□□□□□ -0.37
AC053513.1-201ENST00000543604 DEPDC5O75140 1603 aa12.73□□□□□ -0.37
AC053513.1-201ENST00000543604 ANO8Q9HCE9 1232 aaPredicted RBP12.72□□□□□ -0.37
AC053513.1-201ENST00000543604 TIAM1Q13009 1591 aa12.72□□□□□ -0.37
AC053513.1-201ENST00000543604 DPYSL4O14531 572 aa12.71□□□□□ -0.37
AC053513.1-201ENST00000543604 PPP4R3BQ5MIZ7 849 aa12.71□□□□□ -0.37
AC053513.1-201ENST00000543604 WDR70Q9NW82 654 aa12.71□□□□□ -0.37
AC053513.1-201ENST00000543604 EHBP1L1Q8N3D4 1523 aa12.71□□□□□ -0.38
AC053513.1-201ENST00000543604 LRRC7Q96NW7 1537 aa12.71□□□□□ -0.38
AC053513.1-201ENST00000543604 ZNF454Q8N9F8 522 aa12.7□□□□□ -0.38
AC053513.1-201ENST00000543604 ALKQ9UM73 1620 aa12.7□□□□□ -0.38
AC053513.1-201ENST00000543604 ANKRD13DQ6ZTN6 518 aa12.69□□□□□ -0.38
AC053513.1-201ENST00000543604 EID1Q9Y6B2 187 aa12.69□□□□□ -0.38
AC053513.1-201ENST00000543604 CAMSAP2Q08AD1 1489 aa12.68□□□□□ -0.38
AC053513.1-201ENST00000543604 MMRN1Q13201 1228 aa12.68□□□□□ -0.38
AC053513.1-201ENST00000543604 TXNDC2Q86VQ3 553 aa12.68□□□□□ -0.38
AC053513.1-201ENST00000543604 RGS17Q9UGC6 210 aaPredicted RBP12.68□□□□□ -0.38
AC053513.1-201ENST00000543604 PBX2P40425 430 aa12.67□□□□□ -0.38
AC053513.1-201ENST00000543604 IQGAP1P46940 1657 aa12.67□□□□□ -0.38
AC053513.1-201ENST00000543604 FOSBP53539 338 aa12.66□□□□□ -0.38
AC053513.1-201ENST00000543604 LSM11P83369 360 aaKnown RBP eCLIP12.66□□□□□ -0.38
AC053513.1-201ENST00000543604 PLCB2Q00722 1185 aa12.66□□□□□ -0.38
AC053513.1-201ENST00000543604 E2F4Q16254 413 aa12.66□□□□□ -0.38
AC053513.1-201ENST00000543604 RNF17Q9BXT8 1623 aaKnown RBP12.66□□□□□ -0.38
AC053513.1-201ENST00000543604 NCOA2Q15596 1464 aa12.65□□□□□ -0.38
AC053513.1-201ENST00000543604 SCAF11Q99590 1463 aaKnown RBP12.65□□□□□ -0.38
AC053513.1-201ENST00000543604 ARHGAP33O14559 1287 aa12.65□□□□□ -0.38
AC053513.1-201ENST00000543604 PSEN2P49810 448 aa12.65□□□□□ -0.38
AC053513.1-201ENST00000543604 ERVK-7P63135 1459 aa12.65□□□□□ -0.38
AC053513.1-201ENST00000543604 SYNMO15061 1565 aa12.64□□□□□ -0.39
AC053513.1-201ENST00000543604 FAM135BQ49AJ0 1406 aa12.64□□□□□ -0.39
AC053513.1-201ENST00000543604 ABCC3O15438 1527 aa12.64□□□□□ -0.39
AC053513.1-201ENST00000543604 LTKP29376 864 aa12.64□□□□□ -0.39
AC053513.1-201ENST00000543604 ARHGEF5Q12774 1597 aa12.62□□□□□ -0.39
AC053513.1-201ENST00000543604 DMRTA1Q5VZB9 504 aa12.61□□□□□ -0.39
AC053513.1-201ENST00000543604 POTEAQ6S8J7 498 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms