RNA–Protein interactions for RNA: ENST00000530646.1

RPL38-205, Transcript of ribosomal protein L38, humanhuman

TSL 1 (best)

Gene RPL38, Length 2,450 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL38-205ENST00000530646 RIMBP3CA6NJZ7 1639 aa22.98■■□□□ 1.27
RPL38-205ENST00000530646 RIMBP3BA6NNM3 1639 aa22.98■■□□□ 1.27
RPL38-205ENST00000530646 RIMBP3Q9UFD9 1639 aa22.98■■□□□ 1.27
RPL38-205ENST00000530646 RTEL1-TNFRSF6BF6WH68 1400 aa22.98■■□□□ 1.27
RPL38-205ENST00000530646 A0A0U1RQG5 324 aaPredicted RBP22.98■■□□□ 1.27
RPL38-205ENST00000530646 CCDC144AA2RUR9 1427 aa22.97■■□□□ 1.27
RPL38-205ENST00000530646 PDZRN3Q9UPQ7 1066 aa22.97■■□□□ 1.27
RPL38-205ENST00000530646 KIF3BO15066 747 aa22.97■■□□□ 1.27
RPL38-205ENST00000530646 ATP7AQ04656 1500 aa22.96■■□□□ 1.27
RPL38-205ENST00000530646 PIK3C2GO75747 1445 aa22.96■■□□□ 1.27
RPL38-205ENST00000530646 TRIM44Q96DX7 344 aaPredicted RBP22.96■■□□□ 1.27
RPL38-205ENST00000530646 PCDHB15Q9Y5E8 787 aa22.96■■□□□ 1.27
RPL38-205ENST00000530646 DDX11L8A8MPP1 907 aa22.96■■□□□ 1.27
RPL38-205ENST00000530646 RAPGEF3O95398 923 aa22.96■■□□□ 1.27
RPL38-205ENST00000530646 CANXP27824 592 aaKnown RBP22.96■■□□□ 1.27
RPL38-205ENST00000530646 PMFBP1Q8TBY8 1022 aa22.95■■□□□ 1.26
RPL38-205ENST00000530646 ZNF692Q9BU19 519 aaPredicted RBP22.95■■□□□ 1.26
RPL38-205ENST00000530646 GAS2L3Q86XJ1 694 aa22.94■■□□□ 1.26
RPL38-205ENST00000530646 AAMPQ13685 434 aa22.94■■□□□ 1.26
RPL38-205ENST00000530646 INO80Q9ULG1 1556 aaPredicted RBP22.92■■□□□ 1.26
RPL38-205ENST00000530646 C22orf23Q9BZE7 217 aa22.92■■□□□ 1.26
RPL38-205ENST00000530646 IQGAP3Q86VI3 1631 aa22.92■■□□□ 1.26
RPL38-205ENST00000530646 KIAA1211Q6ZU35 1233 aa22.91■■□□□ 1.26
RPL38-205ENST00000530646 EIF2AK4Q9P2K8 1649 aaKnown RBP22.9■■□□□ 1.26
RPL38-205ENST00000530646 ASXL1Q8IXJ9 1541 aa22.88■■□□□ 1.25
RPL38-205ENST00000530646 DDIT3P35638 169 aa22.88■■□□□ 1.25
RPL38-205ENST00000530646 KIDINS220Q9ULH0 1771 aa22.88■■□□□ 1.25
RPL38-205ENST00000530646 TNNQ9UQP3 1299 aa22.87■■□□□ 1.25
RPL38-205ENST00000530646 RLBP1P12271 317 aa22.87■■□□□ 1.25
RPL38-205ENST00000530646 MFAP1P55081 439 aaKnown RBP22.86■■□□□ 1.25
RPL38-205ENST00000530646 NCOA3Q9Y6Q9 1424 aa22.86■■□□□ 1.25
RPL38-205ENST00000530646 ZNF518AQ6AHZ1 1483 aa22.85■■□□□ 1.25
RPL38-205ENST00000530646 SYNMO15061 1565 aa22.84■■□□□ 1.25
RPL38-205ENST00000530646 FAM69CQ0P6D2 419 aa22.84■■□□□ 1.25
RPL38-205ENST00000530646 RNF17Q9BXT8 1623 aaKnown RBP22.84■■□□□ 1.25
RPL38-205ENST00000530646 HSCBQ8IWL3 235 aa22.84■■□□□ 1.25
RPL38-205ENST00000530646 RIPK4P57078 832 aa22.83■■□□□ 1.25
RPL38-205ENST00000530646 TNPO1Q92973 898 aaKnown RBP22.83■■□□□ 1.25
RPL38-205ENST00000530646 RWDD1Q9H446 243 aaPredicted RBP22.83■■□□□ 1.25
RPL38-205ENST00000530646 POGZQ7Z3K3 1410 aa22.83■■□□□ 1.25
RPL38-205ENST00000530646 RARSP54136 660 aaKnown RBP22.83■■□□□ 1.24
RPL38-205ENST00000530646 WWC1Q8IX03 1113 aa22.82■■□□□ 1.24
RPL38-205ENST00000530646 NGEFQ8N5V2 710 aa22.82■■□□□ 1.24
RPL38-205ENST00000530646 OFD1O75665 1012 aa22.81■■□□□ 1.24
RPL38-205ENST00000530646 NPC1L1Q9UHC9 1359 aa22.8■■□□□ 1.24
RPL38-205ENST00000530646 GGT6Q6P531 493 aa22.8■■□□□ 1.24
RPL38-205ENST00000530646 PPP1R9BQ96SB3 815 aa22.8■■□□□ 1.24
RPL38-205ENST00000530646 FGD1P98174 961 aa22.79■■□□□ 1.24
RPL38-205ENST00000530646 CCDC173Q0VFZ6 552 aa22.79■■□□□ 1.24
RPL38-205ENST00000530646 ZSCAN30Q86W11 494 aa22.79■■□□□ 1.24
RPL38-205ENST00000530646 MYOM1P52179 1685 aa22.77■■□□□ 1.24
RPL38-205ENST00000530646 SKOR2Q2VWA4 1001 aaPredicted RBP22.76■■□□□ 1.23
RPL38-205ENST00000530646 DEPDC5O75140 1603 aa22.76■■□□□ 1.23
RPL38-205ENST00000530646 MROH1Q8NDA8 1641 aa22.76■■□□□ 1.23
RPL38-205ENST00000530646 ATP10AO60312 1499 aa22.76■■□□□ 1.23
RPL38-205ENST00000530646 GBP4Q96PP9 640 aa22.75■■□□□ 1.23
RPL38-205ENST00000530646 IQGAP1P46940 1657 aa22.75■■□□□ 1.23
RPL38-205ENST00000530646 SMC5Q8IY18 1101 aa22.75■■□□□ 1.23
RPL38-205ENST00000530646 TERF1P54274 439 aa22.74■■□□□ 1.23
RPL38-205ENST00000530646 RAB3GAP1Q15042 981 aa22.74■■□□□ 1.23
RPL38-205ENST00000530646 BCL2L13Q9BXK5 485 aa22.74■■□□□ 1.23
RPL38-205ENST00000530646 TSPOAP1O95153 1857 aa22.74■■□□□ 1.23
RPL38-205ENST00000530646 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.73■■□□□ 1.23
RPL38-205ENST00000530646 SNX21Q969T3 373 aa22.73■■□□□ 1.23
RPL38-205ENST00000530646 CIZ1Q9ULV3 898 aaPredicted RBP22.73■■□□□ 1.23
RPL38-205ENST00000530646 KANK1Q14678 1352 aa22.73■■□□□ 1.23
RPL38-205ENST00000530646 NASPP49321 788 aaPredicted RBP22.73■■□□□ 1.23
RPL38-205ENST00000530646 FRMPD1Q5SYB0 1578 aa22.73■■□□□ 1.23
RPL38-205ENST00000530646 CFAP74Q9C0B2 1584 aa22.72■■□□□ 1.23
RPL38-205ENST00000530646 CDCA8Q53HL2 280 aa22.72■■□□□ 1.23
RPL38-205ENST00000530646 MAP3K4Q9Y6R4 1608 aa22.72■■□□□ 1.23
RPL38-205ENST00000530646 UGGT1Q9NYU2 1555 aa22.72■■□□□ 1.23
RPL38-205ENST00000530646 CFAP65Q6ZU64 1925 aaKnown RBP22.72■■□□□ 1.23
RPL38-205ENST00000530646 ABCA6Q8N139 1617 aa22.71■■□□□ 1.23
RPL38-205ENST00000530646 HECW2Q9P2P5 1572 aa22.71■■□□□ 1.23
RPL38-205ENST00000530646 RBM25P49756 843 aaKnown RBP22.7■■□□□ 1.22
RPL38-205ENST00000530646 NEO1Q92859 1461 aa22.7■■□□□ 1.22
RPL38-205ENST00000530646 MLH3Q9UHC1 1453 aa22.7■■□□□ 1.22
RPL38-205ENST00000530646 YEATS2Q9ULM3 1422 aa22.7■■□□□ 1.22
RPL38-205ENST00000530646 MSNP26038 577 aaKnown RBP22.69■■□□□ 1.22
RPL38-205ENST00000530646 VWDEQ8N2E2 1590 aa22.69■■□□□ 1.22
RPL38-205ENST00000530646 PTMSP20962 102 aa22.69■■□□□ 1.22
RPL38-205ENST00000530646 MVPQ14764 893 aaKnown RBP22.69■■□□□ 1.22
RPL38-205ENST00000530646 FAM13BQ9NYF5 915 aa22.69■■□□□ 1.22
RPL38-205ENST00000530646 MAP7D2Q96T17 732 aa22.68■■□□□ 1.22
RPL38-205ENST00000530646 NEUROD2Q15784 382 aa22.68■■□□□ 1.22
RPL38-205ENST00000530646 TET3O43151 1660 aa22.67■■□□□ 1.22
RPL38-205ENST00000530646 SLC24A1O60721 1099 aa22.67■■□□□ 1.22
RPL38-205ENST00000530646 RRP7AQ9Y3A4 280 aaKnown RBP22.67■■□□□ 1.22
RPL38-205ENST00000530646 CLTCL1P53675 1640 aa22.67■■□□□ 1.22
RPL38-205ENST00000530646 HSP90AB1P08238 724 aaKnown RBP22.67■■□□□ 1.22
RPL38-205ENST00000530646 R3HCC1Q9Y3T6 440 aaKnown RBP22.67■■□□□ 1.22
RPL38-205ENST00000530646 DIP2BQ9P265 1576 aa22.67■■□□□ 1.22
RPL38-205ENST00000530646 CEP152O94986 1710 aa22.66■■□□□ 1.22
RPL38-205ENST00000530646 SPHKAPQ2M3C7 1700 aa22.66■■□□□ 1.22
RPL38-205ENST00000530646 MADDQ8WXG6 1647 aa22.66■■□□□ 1.22
RPL38-205ENST00000530646 SMAP1Q8IYB5 467 aaPredicted RBP22.65■■□□□ 1.22
RPL38-205ENST00000530646 PTPRTO14522 1441 aa22.65■■□□□ 1.22
RPL38-205ENST00000530646 ANP32BQ92688 251 aaKnown RBP22.64■■□□□ 1.21
RPL38-205ENST00000530646 TRPM2O94759 1503 aa22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms