RNA–Protein interactions for RNA: ENST00000513206.5

TRIO-221, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 5

Gene TRIO, Length 7,995 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-221ENST00000513206 RUNDC1Q96C34 613 aa19.58■□□□□ 0.73
TRIO-221ENST00000513206 CRBNQ96SW2 442 aa19.58■□□□□ 0.72
TRIO-221ENST00000513206 GRIN2BQ13224 1484 aa19.58■□□□□ 0.72
TRIO-221ENST00000513206 ESCO1Q5FWF5 840 aa19.58■□□□□ 0.72
TRIO-221ENST00000513206 FYB1O15117 783 aa19.57■□□□□ 0.72
TRIO-221ENST00000513206 CABP2Q9NPB3 220 aa19.57■□□□□ 0.72
TRIO-221ENST00000513206 FYCO1Q9BQS8 1478 aa19.57■□□□□ 0.72
TRIO-221ENST00000513206 BECN2A8MW95 431 aa19.57■□□□□ 0.72
TRIO-221ENST00000513206 PCMTD1Q96MG8 357 aaPredicted RBP19.57■□□□□ 0.72
TRIO-221ENST00000513206 HOOK1Q9UJC3 728 aaKnown RBP19.56■□□□□ 0.72
TRIO-221ENST00000513206 KIF6Q6ZMV9 814 aa19.56■□□□□ 0.72
TRIO-221ENST00000513206 NLRP6P59044 892 aa19.56■□□□□ 0.72
TRIO-221ENST00000513206 ZNF644Q9H582 1327 aaPredicted RBP19.55■□□□□ 0.72
TRIO-221ENST00000513206 WASHC2AQ641Q2 1341 aa19.55■□□□□ 0.72
TRIO-221ENST00000513206 RRP1P56182 461 aaKnown RBP19.55■□□□□ 0.72
TRIO-221ENST00000513206 FGD6Q6ZV73 1430 aa19.55■□□□□ 0.72
TRIO-221ENST00000513206 PPP1R1BQ9UD71 204 aaPredicted RBP19.54■□□□□ 0.72
TRIO-221ENST00000513206 CALRP27797 417 aaKnown RBP19.54■□□□□ 0.72
TRIO-221ENST00000513206 FAM161AQ3B820 660 aa19.54■□□□□ 0.72
TRIO-221ENST00000513206 TMEM132EQ6IEE7 984 aa19.54■□□□□ 0.72
TRIO-221ENST00000513206 STRN4Q9NRL3 753 aa19.54■□□□□ 0.72
TRIO-221ENST00000513206 NEUROD6Q96NK8 337 aa19.54■□□□□ 0.72
TRIO-221ENST00000513206 CCDC47Q96A33 483 aaKnown RBP19.54■□□□□ 0.72
TRIO-221ENST00000513206 ZBED9Q6R2W3 1325 aa19.53■□□□□ 0.72
TRIO-221ENST00000513206 API5Q9BZZ5 524 aaKnown RBP19.53■□□□□ 0.72
TRIO-221ENST00000513206 LRRC9Q6ZRR7 1453 aa19.53■□□□□ 0.72
TRIO-221ENST00000513206 DZIP1LQ8IYY4 767 aaKnown RBP19.53■□□□□ 0.72
TRIO-221ENST00000513206 SF3B2Q13435 895 aaKnown RBP19.52■□□□□ 0.72
TRIO-221ENST00000513206 TXNDC2Q86VQ3 553 aa19.52■□□□□ 0.72
TRIO-221ENST00000513206 PRKRIP1Q9H875 184 aaPredicted RBP19.52■□□□□ 0.71
TRIO-221ENST00000513206 ERC2O15083 957 aa19.52■□□□□ 0.71
TRIO-221ENST00000513206 GNAI1P63096 354 aa19.51■□□□□ 0.71
TRIO-221ENST00000513206 ANKRD20A12PQ8NF67 263 aa19.51■□□□□ 0.71
TRIO-221ENST00000513206 ANKRD50Q9ULJ7 1429 aa19.5■□□□□ 0.71
TRIO-221ENST00000513206 CCAR2Q8N163 923 aaKnown RBP19.5■□□□□ 0.71
TRIO-221ENST00000513206 DDX49Q9Y6V7 483 aaKnown RBP19.5■□□□□ 0.71
TRIO-221ENST00000513206 RALYLQ86SE5 291 aaKnown RBP19.5■□□□□ 0.71
TRIO-221ENST00000513206 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.49■□□□□ 0.71
TRIO-221ENST00000513206 IKQ13123 557 aaPredicted RBP19.49■□□□□ 0.71
TRIO-221ENST00000513206 GGNBP2Q9H3C7 697 aa19.49■□□□□ 0.71
TRIO-221ENST00000513206 PDE4AP27815 886 aa19.48■□□□□ 0.71
TRIO-221ENST00000513206 WASHC4Q2M389 1173 aa19.48■□□□□ 0.71
TRIO-221ENST00000513206 HSP90AB4PQ58FF6 505 aa19.48■□□□□ 0.71
TRIO-221ENST00000513206 FAM177BA6PVY3 158 aa19.48■□□□□ 0.71
TRIO-221ENST00000513206 CCDC70Q6NSX1 233 aa19.48■□□□□ 0.71
TRIO-221ENST00000513206 SAFBQ15424 915 aaKnown RBP eCLIP19.48■□□□□ 0.71
TRIO-221ENST00000513206 SKOR2Q2VWA4 1001 aaPredicted RBP19.48■□□□□ 0.71
TRIO-221ENST00000513206 NCOA2Q15596 1464 aa19.47■□□□□ 0.71
TRIO-221ENST00000513206 MRC2Q9UBG0 1479 aa19.47■□□□□ 0.71
TRIO-221ENST00000513206 BRPF3Q9ULD4 1205 aa19.47■□□□□ 0.71
TRIO-221ENST00000513206 FOSBP53539 338 aa19.47■□□□□ 0.71
TRIO-221ENST00000513206 PROSER2Q86WR7 435 aaPredicted RBP19.47■□□□□ 0.71
TRIO-221ENST00000513206 NINLQ9Y2I6 1382 aa19.47■□□□□ 0.71
TRIO-221ENST00000513206 UBTFL1P0CB47 393 aaPredicted RBP19.47■□□□□ 0.71
TRIO-221ENST00000513206 PRG4Q92954 1404 aaPredicted RBP19.47■□□□□ 0.71
TRIO-221ENST00000513206 STAC3Q96MF2 364 aa19.46■□□□□ 0.71
TRIO-221ENST00000513206 ERICH3Q5RHP9 1530 aa19.46■□□□□ 0.71
TRIO-221ENST00000513206 IPO7O95373 1038 aaKnown RBP19.46■□□□□ 0.71
TRIO-221ENST00000513206 INTS3Q68E01 1043 aaKnown RBP19.46■□□□□ 0.71
TRIO-221ENST00000513206 CCAR1Q8IX12 1150 aaKnown RBP19.46■□□□□ 0.71
TRIO-221ENST00000513206 IGF1RP08069 1367 aa19.45■□□□□ 0.7
TRIO-221ENST00000513206 NUTM2BA6NNL0 878 aaPredicted RBP19.45■□□□□ 0.7
TRIO-221ENST00000513206 NUTM2EB1AL46 878 aaPredicted RBP19.45■□□□□ 0.7
TRIO-221ENST00000513206 NUTM2AQ8IVF1 878 aaPredicted RBP19.45■□□□□ 0.7
TRIO-221ENST00000513206 EHBP1L1Q8N3D4 1523 aa19.45■□□□□ 0.7
TRIO-221ENST00000513206 SYNJ1O43426 1573 aa19.45■□□□□ 0.7
TRIO-221ENST00000513206 MTMR7Q9Y216 660 aa19.45■□□□□ 0.7
TRIO-221ENST00000513206 AFAP1Q8N556 730 aa19.44■□□□□ 0.7
TRIO-221ENST00000513206 TEX35Q5T0J7 233 aa19.44■□□□□ 0.7
TRIO-221ENST00000513206 BICD2Q8TD16 824 aa19.44■□□□□ 0.7
TRIO-221ENST00000513206 EXOC6Q8TAG9 804 aa19.44■□□□□ 0.7
TRIO-221ENST00000513206 BRMS1Q9HCU9 246 aa19.44■□□□□ 0.7
TRIO-221ENST00000513206 CCDC30Q5VVM6 783 aa19.43■□□□□ 0.7
TRIO-221ENST00000513206 RBM42Q9BTD8 480 aaKnown RBP19.43■□□□□ 0.7
TRIO-221ENST00000513206 EPS15P42566 896 aa19.43■□□□□ 0.7
TRIO-221ENST00000513206 CCDC66A2RUB6 948 aa19.43■□□□□ 0.7
TRIO-221ENST00000513206 THEMISQ8N1K5 641 aaPredicted RBP19.43■□□□□ 0.7
TRIO-221ENST00000513206 CNTLNQ9NXG0 1405 aa19.43■□□□□ 0.7
TRIO-221ENST00000513206 PIP4K2BP78356 416 aa19.42■□□□□ 0.7
TRIO-221ENST00000513206 CASKIN1Q8WXD9 1431 aa19.42■□□□□ 0.7
TRIO-221ENST00000513206 CUL7Q14999 1698 aa19.42■□□□□ 0.7
TRIO-221ENST00000513206 NESP48681 1621 aa19.42■□□□□ 0.7
TRIO-221ENST00000513206 PLEKHO1Q53GL0 409 aaPredicted RBP19.42■□□□□ 0.7
TRIO-221ENST00000513206 PRAM1Q96QH2 718 aa19.42■□□□□ 0.7
TRIO-221ENST00000513206 EFCAB5A4FU69 1503 aa19.41■□□□□ 0.7
TRIO-221ENST00000513206 MTHFSP49914 203 aa19.41■□□□□ 0.7
TRIO-221ENST00000513206 R3HCC1Q9Y3T6 440 aaKnown RBP19.41■□□□□ 0.7
TRIO-221ENST00000513206 GAS2L2Q8NHY3 880 aa19.41■□□□□ 0.7
TRIO-221ENST00000513206 LNPKQ9C0E8 428 aa19.41■□□□□ 0.7
TRIO-221ENST00000513206 SMC3Q9UQE7 1217 aa19.41■□□□□ 0.7
TRIO-221ENST00000513206 TOP2BQ02880 1626 aa19.41■□□□□ 0.7
TRIO-221ENST00000513206 XBP1P17861 261 aa19.41■□□□□ 0.7
TRIO-221ENST00000513206 NOM1Q5C9Z4 860 aaKnown RBP19.41■□□□□ 0.7
TRIO-221ENST00000513206 NFKBIBQ15653 356 aa19.41■□□□□ 0.7
TRIO-221ENST00000513206 CNTROBQ8N137 903 aa19.41■□□□□ 0.7
TRIO-221ENST00000513206 VPS37CA5D8V6 355 aaPredicted RBP19.4■□□□□ 0.7
TRIO-221ENST00000513206 TOM1L2Q6ZVM7 507 aa19.4■□□□□ 0.7
TRIO-221ENST00000513206 TBC1D2BQ9UPU7 963 aa19.4■□□□□ 0.7
TRIO-221ENST00000513206 KIF14Q15058 1648 aa19.39■□□□□ 0.7
TRIO-221ENST00000513206 ODF2Q5BJF6 829 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms