RNA–Protein interactions for RNA: ENST00000513206.5

TRIO-221, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 5

Gene TRIO, Length 7,995 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-221ENST00000513206 DCAF8L2P0C7V8 631 aa28.23■■■□□ 2.11
TRIO-221ENST00000513206 NISCHQ9Y2I1 1504 aa26.45■■□□□ 1.83
TRIO-221ENST00000513206 SUPT5HO00267 1087 aaKnown RBP26.33■■□□□ 1.8
TRIO-221ENST00000513206 SHROOM4Q9ULL8 1493 aa26.02■■□□□ 1.76
TRIO-221ENST00000513206 EHMT2Q96KQ7 1210 aa25.82■■□□□ 1.72
TRIO-221ENST00000513206 PELP1Q8IZL8 1130 aaKnown RBP25.69■■□□□ 1.7
TRIO-221ENST00000513206 MYT1Q01538 1121 aa25.65■■□□□ 1.7
TRIO-221ENST00000513206 APLP2Q06481 763 aa25.38■■□□□ 1.65
TRIO-221ENST00000513206 FAM9AQ8IZU1 332 aaPredicted RBP25.33■■□□□ 1.65
TRIO-221ENST00000513206 TTBK1Q5TCY1 1321 aaPredicted RBP24.9■■□□□ 1.58
TRIO-221ENST00000513206 RANGAP1P46060 587 aaPredicted RBP24.78■■□□□ 1.56
TRIO-221ENST00000513206 ATP1B4Q9UN42 357 aaPredicted RBP24.74■■□□□ 1.55
TRIO-221ENST00000513206 PCGF6Q9BYE7 350 aa24.47■■□□□ 1.51
TRIO-221ENST00000513206 TRIM41Q8WV44 630 aa24.41■■□□□ 1.5
TRIO-221ENST00000513206 CENPBP07199 599 aaPredicted RBP24.4■■□□□ 1.5
TRIO-221ENST00000513206 UBTFP17480 764 aaKnown RBP24.34■■□□□ 1.49
TRIO-221ENST00000513206 ERICH6Q7L0X2 663 aa24.28■■□□□ 1.48
TRIO-221ENST00000513206 CCER1Q8TC90 406 aaPredicted RBP24.23■■□□□ 1.47
TRIO-221ENST00000513206 ZEB1P37275 1124 aaPredicted RBP24.02■■□□□ 1.44
TRIO-221ENST00000513206 MYT1LQ9UL68 1186 aa23.99■■□□□ 1.43
TRIO-221ENST00000513206 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.82■■□□□ 1.4
TRIO-221ENST00000513206 HNRNPUL2Q1KMD3 747 aaKnown RBP23.82■■□□□ 1.4
TRIO-221ENST00000513206 NEFLP07196 543 aa23.76■■□□□ 1.39
TRIO-221ENST00000513206 PPARGC1BQ86YN6 1023 aaKnown RBP23.75■■□□□ 1.39
TRIO-221ENST00000513206 CHIC1Q5VXU3 224 aa23.62■■□□□ 1.37
TRIO-221ENST00000513206 YTHDC1Q96MU7 727 aaKnown RBP23.61■■□□□ 1.37
TRIO-221ENST00000513206 ITGAEP38570 1179 aa23.6■■□□□ 1.37
TRIO-221ENST00000513206 POLR3GLQ9BT43 218 aa23.57■■□□□ 1.36
TRIO-221ENST00000513206 HRCP23327 699 aa23.55■■□□□ 1.36
TRIO-221ENST00000513206 SLC4A1APQ9BWU0 796 aaKnown RBP23.4■■□□□ 1.34
TRIO-221ENST00000513206 CNGB1Q14028 1251 aaPredicted RBP23.3■■□□□ 1.32
TRIO-221ENST00000513206 TRIM26Q12899 539 aaPredicted RBP23.3■■□□□ 1.32
TRIO-221ENST00000513206 DAXXQ9UER7 740 aaPredicted RBP23.28■■□□□ 1.32
TRIO-221ENST00000513206 ABCC9O60706 1549 aa23.26■■□□□ 1.31
TRIO-221ENST00000513206 PABPN1Q86U42 306 aaKnown RBP eCLIP23.11■■□□□ 1.29
TRIO-221ENST00000513206 LOC105371045A0A1W2PR82 267 aa23.09■■□□□ 1.29
TRIO-221ENST00000513206 FAM50AQ14320 339 aaKnown RBP23.02■■□□□ 1.28
TRIO-221ENST00000513206 FBLN2P98095 1184 aa22.93■■□□□ 1.26
TRIO-221ENST00000513206 TRIM52Q96A61 297 aa22.88■■□□□ 1.25
TRIO-221ENST00000513206 CLSPNQ9HAW4 1339 aa22.82■■□□□ 1.24
TRIO-221ENST00000513206 RTL5Q5HYW3 569 aaPredicted RBP22.79■■□□□ 1.24
TRIO-221ENST00000513206 GTF3C3Q9Y5Q9 886 aa22.74■■□□□ 1.23
TRIO-221ENST00000513206 NEUROD1Q13562 356 aa22.72■■□□□ 1.23
TRIO-221ENST00000513206 BCANQ96GW7 911 aa22.71■■□□□ 1.23
TRIO-221ENST00000513206 ZNF316A6NFI3 1004 aaPredicted RBP22.69■■□□□ 1.22
TRIO-221ENST00000513206 SLC24A1O60721 1099 aa22.69■■□□□ 1.22
TRIO-221ENST00000513206 ZNF326Q5BKZ1 582 aaKnown RBP22.63■■□□□ 1.21
TRIO-221ENST00000513206 SCRIBQ14160 1630 aa22.61■■□□□ 1.21
TRIO-221ENST00000513206 DIEXFQ68CQ4 756 aaKnown RBP22.59■■□□□ 1.21
TRIO-221ENST00000513206 ZBTB47Q9UFB7 747 aaPredicted RBP22.52■■□□□ 1.2
TRIO-221ENST00000513206 ARID3CA6NKF2 412 aa22.46■■□□□ 1.19
TRIO-221ENST00000513206 P3H3Q8IVL6 736 aa22.43■■□□□ 1.18
TRIO-221ENST00000513206 BCL11AQ9H165 835 aa22.41■■□□□ 1.18
TRIO-221ENST00000513206 ACIN1Q9UKV3 1341 aaKnown RBP22.41■■□□□ 1.18
TRIO-221ENST00000513206 NEFMP07197 916 aa22.41■■□□□ 1.18
TRIO-221ENST00000513206 ESF1Q9H501 851 aaKnown RBP22.4■■□□□ 1.18
TRIO-221ENST00000513206 ANP32CO43423 234 aa22.38■■□□□ 1.17
TRIO-221ENST00000513206 ZNF777Q9ULD5 760 aaPredicted RBP22.34■■□□□ 1.17
TRIO-221ENST00000513206 CANXP27824 592 aaKnown RBP22.33■■□□□ 1.17
TRIO-221ENST00000513206 PLPPR3Q6T4P5 718 aa22.33■■□□□ 1.17
TRIO-221ENST00000513206 CCDC180Q9P1Z9 1646 aa22.31■■□□□ 1.16
TRIO-221ENST00000513206 GLIPR1L2Q4G1C9 344 aa22.29■■□□□ 1.16
TRIO-221ENST00000513206 STAG3Q9UJ98 1225 aa22.24■■□□□ 1.15
TRIO-221ENST00000513206 CDK11AQ9UQ88 783 aaPredicted RBP22.23■■□□□ 1.15
TRIO-221ENST00000513206 EIF5BO60841 1220 aaKnown RBP22.23■■□□□ 1.15
TRIO-221ENST00000513206 NPM1P06748 294 aaKnown RBP eCLIP22.17■■□□□ 1.14
TRIO-221ENST00000513206 CHGAP10645 457 aaKnown RBP22.13■■□□□ 1.13
TRIO-221ENST00000513206 SCAF1Q9H7N4 1312 aaKnown RBP22.05■■□□□ 1.12
TRIO-221ENST00000513206 CSRNP3Q8WYN3 585 aa22■■□□□ 1.11
TRIO-221ENST00000513206 RB1CC1Q8TDY2 1594 aa21.92■■□□□ 1.1
TRIO-221ENST00000513206 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.92■■□□□ 1.17e-7■■■□□ 14.9
TRIO-221ENST00000513206 TONSLQ96HA7 1378 aa21.88■■□□□ 1.09
TRIO-221ENST00000513206 ANP32AP39687 249 aaKnown RBP21.83■■□□□ 1.09
TRIO-221ENST00000513206 CHMP7Q8WUX9 453 aaPredicted RBP21.82■■□□□ 1.08
TRIO-221ENST00000513206 HSP90AA1P07900 732 aaKnown RBP21.76■■□□□ 1.07
TRIO-221ENST00000513206 A0A0G2JS52 829 aa21.74■■□□□ 1.07
TRIO-221ENST00000513206 ANP32EQ9BTT0 268 aa21.74■■□□□ 1.07
TRIO-221ENST00000513206 CHIC2Q9UKJ5 165 aa21.74■■□□□ 1.07
TRIO-221ENST00000513206 ZCCHC6Q5VYS8 1495 aaKnown RBP21.72■■□□□ 1.07
TRIO-221ENST00000513206 NPM2Q86SE8 214 aaKnown RBP21.7■■□□□ 1.06
TRIO-221ENST00000513206 TSPY4P0CV99 314 aa21.7■■□□□ 1.06
TRIO-221ENST00000513206 TSPY10P0CW01 314 aa21.7■■□□□ 1.06
TRIO-221ENST00000513206 SALL2Q9Y467 1007 aaPredicted RBP21.69■■□□□ 1.06
TRIO-221ENST00000513206 KDM2AQ9Y2K7 1162 aa21.68■■□□□ 1.06
TRIO-221ENST00000513206 MTUS2Q5JR59 1369 aa21.66■■□□□ 1.06
TRIO-221ENST00000513206 UPF2Q9HAU5 1272 aaKnown RBP21.64■■□□□ 1.06
TRIO-221ENST00000513206 SENP3Q9H4L4 574 aaPredicted RBP21.64■■□□□ 1.05
TRIO-221ENST00000513206 PLEKHG5O94827 1062 aa21.64■■□□□ 1.05
TRIO-221ENST00000513206 FAM9BQ8IZU0 186 aa21.63■■□□□ 1.05
TRIO-221ENST00000513206 TMC1Q8TDI8 760 aa21.63■■□□□ 1.05
TRIO-221ENST00000513206 WDR43Q15061 677 aaKnown RBP eCLIP21.59■■□□□ 1.05
TRIO-221ENST00000513206 C14orf37Q86TY3 774 aa21.59■■□□□ 1.05
TRIO-221ENST00000513206 ANP32BQ92688 251 aaKnown RBP21.59■■□□□ 1.05
TRIO-221ENST00000513206 ZBTB7CA1YPR0 619 aa21.57■■□□□ 1.04
TRIO-221ENST00000513206 HNRNPUQ00839 825 aaKnown RBP eCLIP21.57■■□□□ 1.04
TRIO-221ENST00000513206 NBR1Q14596 966 aa21.57■■□□□ 1.04
TRIO-221ENST00000513206 KCNH8Q96L42 1107 aa21.57■■□□□ 1.04
TRIO-221ENST00000513206 ERCC6Q03468 1493 aa21.55■■□□□ 1.04
TRIO-221ENST00000513206 DDX10Q13206 875 aaKnown RBP21.55■■□□□ 1.04
TRIO-221ENST00000513206 ARID4BQ4LE39 1312 aaPredicted RBP21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms