RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 ZNF644Q9H582 1327 aaPredicted RBP6.52□□□□□ -1.37
HMGB3P16-201ENST00000508037 PTPRGP23470 1445 aa6.52□□□□□ -1.37
HMGB3P16-201ENST00000508037 C9orf84Q5VXU9 1444 aa6.52□□□□□ -1.37
HMGB3P16-201ENST00000508037 SPRYD3Q8NCJ5 442 aa6.52□□□□□ -1.37
HMGB3P16-201ENST00000508037 BACH2Q9BYV9 841 aa6.52□□□□□ -1.37
HMGB3P16-201ENST00000508037 E9PCH4 1651 aa6.52□□□□□ -1.37
HMGB3P16-201ENST00000508037 PRG4Q92954 1404 aaPredicted RBP6.51□□□□□ -1.37
HMGB3P16-201ENST00000508037 LAMC1P11047 1609 aa6.51□□□□□ -1.37
HMGB3P16-201ENST00000508037 PLEKHD1A6NEE1 506 aa6.51□□□□□ -1.37
HMGB3P16-201ENST00000508037 FOXK1P85037 733 aa6.51□□□□□ -1.37
HMGB3P16-201ENST00000508037 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.51□□□□□ -1.37
HMGB3P16-201ENST00000508037 GRIN2AQ12879 1464 aa6.51□□□□□ -1.37
HMGB3P16-201ENST00000508037 MAGI1Q96QZ7 1491 aaPredicted RBP6.51□□□□□ -1.37
HMGB3P16-201ENST00000508037 ARHGEF5Q12774 1597 aa6.51□□□□□ -1.37
HMGB3P16-201ENST00000508037 GPRASP1Q5JY77 1395 aa6.5□□□□□ -1.37
HMGB3P16-201ENST00000508037 ST20-MTHFSA0A0A6YYL1 179 aa6.5□□□□□ -1.37
HMGB3P16-201ENST00000508037 ARID3CA6NKF2 412 aa6.5□□□□□ -1.37
HMGB3P16-201ENST00000508037 NEFMP07197 916 aa6.5□□□□□ -1.37
HMGB3P16-201ENST00000508037 PLPP6Q8IY26 295 aa6.5□□□□□ -1.37
HMGB3P16-201ENST00000508037 EXOC6Q8TAG9 804 aa6.5□□□□□ -1.37
HMGB3P16-201ENST00000508037 ZNF777Q9ULD5 760 aaPredicted RBP6.5□□□□□ -1.37
HMGB3P16-201ENST00000508037 EIF2AK4Q9P2K8 1649 aaKnown RBP6.5□□□□□ -1.37
HMGB3P16-201ENST00000508037 BLMP54132 1417 aaPredicted RBP6.5□□□□□ -1.37
HMGB3P16-201ENST00000508037 NUP160Q12769 1436 aa6.5□□□□□ -1.37
HMGB3P16-201ENST00000508037 FAM205CA6NFA0 338 aa6.49□□□□□ -1.37
HMGB3P16-201ENST00000508037 SLC34A2O95436 690 aa6.49□□□□□ -1.37
HMGB3P16-201ENST00000508037 GPR153Q6NV75 609 aa6.49□□□□□ -1.37
HMGB3P16-201ENST00000508037 CENPQQ7L2Z9 268 aaPredicted RBP6.49□□□□□ -1.37
HMGB3P16-201ENST00000508037 NPM2Q86SE8 214 aaKnown RBP6.49□□□□□ -1.37
HMGB3P16-201ENST00000508037 CDAN1Q8IWY9 1227 aa6.49□□□□□ -1.37
HMGB3P16-201ENST00000508037 DCAF11Q8TEB1 546 aa6.49□□□□□ -1.37
HMGB3P16-201ENST00000508037 CCDC144AA2RUR9 1427 aa6.49□□□□□ -1.37
HMGB3P16-201ENST00000508037 PRAG1Q86YV5 1406 aa6.49□□□□□ -1.37
HMGB3P16-201ENST00000508037 ERBB3P21860 1342 aa6.49□□□□□ -1.37
HMGB3P16-201ENST00000508037 ABCC10Q5T3U5 1492 aa6.48□□□□□ -1.37
HMGB3P16-201ENST00000508037 EIF3AQ14152 1382 aaKnown RBP6.48□□□□□ -1.37
HMGB3P16-201ENST00000508037 SLC24A1O60721 1099 aa6.48□□□□□ -1.37
HMGB3P16-201ENST00000508037 DSG2Q14126 1118 aa6.48□□□□□ -1.37
HMGB3P16-201ENST00000508037 CDCA8Q53HL2 280 aa6.48□□□□□ -1.37
HMGB3P16-201ENST00000508037 ARSIQ5FYB1 569 aa6.48□□□□□ -1.37
HMGB3P16-201ENST00000508037 NGEFQ8N5V2 710 aa6.48□□□□□ -1.37
HMGB3P16-201ENST00000508037 STAC3Q96MF2 364 aa6.48□□□□□ -1.37
HMGB3P16-201ENST00000508037 CFAP44Q96MT7 982 aa6.48□□□□□ -1.37
HMGB3P16-201ENST00000508037 CRISPLD2Q9H0B8 497 aa6.48□□□□□ -1.37
HMGB3P16-201ENST00000508037 EIF4G3O43432 1585 aaKnown RBP6.48□□□□□ -1.37
HMGB3P16-201ENST00000508037 SYNJ2O15056 1496 aa6.47□□□□□ -1.37
HMGB3P16-201ENST00000508037 COL17A1Q9UMD9 1497 aaPredicted RBP6.47□□□□□ -1.37
HMGB3P16-201ENST00000508037 TMF1P82094 1093 aa6.47□□□□□ -1.37
HMGB3P16-201ENST00000508037 CNGB1Q14028 1251 aaPredicted RBP6.47□□□□□ -1.37
HMGB3P16-201ENST00000508037 PAXIP1Q6ZW49 1069 aaPredicted RBP6.47□□□□□ -1.37
HMGB3P16-201ENST00000508037 KDM2AQ9Y2K7 1162 aa6.47□□□□□ -1.37
HMGB3P16-201ENST00000508037 CCDC141Q6ZP82 1450 aa6.47□□□□□ -1.37
HMGB3P16-201ENST00000508037 TRPM1Q7Z4N2 1603 aa6.47□□□□□ -1.37
HMGB3P16-201ENST00000508037 FAM135AQ9P2D6 1515 aa6.46□□□□□ -1.37
HMGB3P16-201ENST00000508037 TBC1D12O60347 775 aa6.46□□□□□ -1.38
HMGB3P16-201ENST00000508037 PPP1R15BQ5SWA1 713 aa6.46□□□□□ -1.38
HMGB3P16-201ENST00000508037 CDC42BPAQ5VT25 1732 aa6.46□□□□□ -1.38
HMGB3P16-201ENST00000508037 CHMP7Q8WUX9 453 aaPredicted RBP6.46□□□□□ -1.38
HMGB3P16-201ENST00000508037 HS3ST6Q96QI5 342 aa6.46□□□□□ -1.38
HMGB3P16-201ENST00000508037 ERBINQ96RT1 1412 aa6.46□□□□□ -1.38
HMGB3P16-201ENST00000508037 LARP6Q9BRS8 491 aaKnown RBP6.46□□□□□ -1.38
HMGB3P16-201ENST00000508037 PCDHGA4Q9Y5G9 962 aa6.46□□□□□ -1.38
HMGB3P16-201ENST00000508037 PLB1Q6P1J6 1458 aa6.46□□□□□ -1.38
HMGB3P16-201ENST00000508037 NCKAP5LQ9HCH0 1330 aa6.46□□□□□ -1.38
HMGB3P16-201ENST00000508037 PRDM15P57071 1507 aaPredicted RBP6.45□□□□□ -1.38
HMGB3P16-201ENST00000508037 ABCA8O94911 1581 aa6.45□□□□□ -1.38
HMGB3P16-201ENST00000508037 PER1O15534 1290 aaPredicted RBP6.45□□□□□ -1.38
HMGB3P16-201ENST00000508037 WDR43Q15061 677 aaKnown RBP eCLIP6.45□□□□□ -1.38
HMGB3P16-201ENST00000508037 FAM161AQ3B820 660 aa6.45□□□□□ -1.38
HMGB3P16-201ENST00000508037 PTCD2Q8WV60 388 aaKnown RBP6.45□□□□□ -1.38
HMGB3P16-201ENST00000508037 DDX27Q96GQ7 796 aaKnown RBP6.45□□□□□ -1.38
HMGB3P16-201ENST00000508037 LAS1LQ9Y4W2 734 aaKnown RBP6.45□□□□□ -1.38
HMGB3P16-201ENST00000508037 CLASP1Q7Z460 1538 aa6.45□□□□□ -1.38
HMGB3P16-201ENST00000508037 NINLQ9Y2I6 1382 aa6.44□□□□□ -1.38
HMGB3P16-201ENST00000508037 UNC13BO14795 1591 aa6.44□□□□□ -1.38
HMGB3P16-201ENST00000508037 MAST1Q9Y2H9 1570 aa6.44□□□□□ -1.38
HMGB3P16-201ENST00000508037 AAMPQ13685 434 aa6.44□□□□□ -1.38
HMGB3P16-201ENST00000508037 KHSRPQ92945 711 aaKnown RBP eCLIP6.44□□□□□ -1.38
HMGB3P16-201ENST00000508037 CRBNQ96SW2 442 aa6.44□□□□□ -1.38
HMGB3P16-201ENST00000508037 ATP10AO60312 1499 aa6.44□□□□□ -1.38
HMGB3P16-201ENST00000508037 ZNF608Q9ULD9 1512 aaPredicted RBP6.44□□□□□ -1.38
HMGB3P16-201ENST00000508037 NPC1L1Q9UHC9 1359 aa6.44□□□□□ -1.38
HMGB3P16-201ENST00000508037 NUDT7P0C024 238 aa6.43□□□□□ -1.38
HMGB3P16-201ENST00000508037 VARS2Q5ST30 1063 aaKnown RBP6.43□□□□□ -1.38
HMGB3P16-201ENST00000508037 JPH4Q96JJ6 628 aa6.43□□□□□ -1.38
HMGB3P16-201ENST00000508037 KNSTRNQ9Y448 316 aa6.43□□□□□ -1.38
HMGB3P16-201ENST00000508037 KDM2BQ8NHM5 1336 aa6.43□□□□□ -1.38
HMGB3P16-201ENST00000508037 ATP10BO94823 1461 aa6.42□□□□□ -1.38
HMGB3P16-201ENST00000508037 CADPS2Q86UW7 1296 aa6.42□□□□□ -1.38
HMGB3P16-201ENST00000508037 TESK2Q96S53 571 aa6.42□□□□□ -1.38
HMGB3P16-201ENST00000508037 PANK3Q9H999 370 aa6.42□□□□□ -1.38
HMGB3P16-201ENST00000508037 PLXNC1O60486 1568 aa6.42□□□□□ -1.38
HMGB3P16-201ENST00000508037 PIK3C2GO75747 1445 aa6.42□□□□□ -1.38
HMGB3P16-201ENST00000508037 SCAPERQ9BY12 1400 aa6.42□□□□□ -1.38
HMGB3P16-201ENST00000508037 A2MP01023 1474 aa6.41□□□□□ -1.38
HMGB3P16-201ENST00000508037 PREX2Q70Z35 1606 aa6.41□□□□□ -1.38
HMGB3P16-201ENST00000508037 IQGAP3Q86VI3 1631 aa6.41□□□□□ -1.38
HMGB3P16-201ENST00000508037 POTEB3A0JP26 581 aa6.41□□□□□ -1.38
HMGB3P16-201ENST00000508037 BECN1Q14457 450 aa6.41□□□□□ -1.38
HMGB3P16-201ENST00000508037 MFSD10Q14728 455 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms