RNA–Protein interactions for RNA: ENST00000497236.1

CRIM1-208, Transcript of cysteine rich transmembrane BMP regulator 1, humanhuman

TSL 3

Gene CRIM1, Length 240 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRIM1-208ENST00000497236 CLGNO14967 610 aa3.54□□□□□ -1.84
CRIM1-208ENST00000497236 HSP90AB1P08238 724 aaKnown RBP3.54□□□□□ -1.84
CRIM1-208ENST00000497236 CT47B1P0C2W7 299 aaPredicted RBP3.54□□□□□ -1.84
CRIM1-208ENST00000497236 NASPP49321 788 aaPredicted RBP3.54□□□□□ -1.84
CRIM1-208ENST00000497236 ZNF445P59923 1031 aa3.54□□□□□ -1.84
CRIM1-208ENST00000497236 NUCB2P80303 420 aa3.54□□□□□ -1.84
CRIM1-208ENST00000497236 SYCP1Q15431 976 aa3.54□□□□□ -1.84
CRIM1-208ENST00000497236 KLHL40Q2TBA0 621 aa3.54□□□□□ -1.84
CRIM1-208ENST00000497236 NBPF1Q3BBV0 1214 aa3.54□□□□□ -1.84
CRIM1-208ENST00000497236 CCDC184Q52MB2 194 aa3.54□□□□□ -1.84
CRIM1-208ENST00000497236 CDCA8Q53HL2 280 aa3.54□□□□□ -1.84
CRIM1-208ENST00000497236 HSCBQ8IWL3 235 aa3.54□□□□□ -1.84
CRIM1-208ENST00000497236 SMC5Q8IY18 1101 aa3.54□□□□□ -1.84
CRIM1-208ENST00000497236 FTSJ3Q8IY81 847 aaKnown RBP3.54□□□□□ -1.84
CRIM1-208ENST00000497236 FAM184AQ8NB25 1140 aa3.54□□□□□ -1.84
CRIM1-208ENST00000497236 RWDD1Q9H446 243 aaPredicted RBP3.54□□□□□ -1.84
CRIM1-208ENST00000497236 CWC22Q9HCG8 908 aaKnown RBP3.54□□□□□ -1.84
CRIM1-208ENST00000497236 BCCIPQ9P287 314 aaKnown RBP eCLIP3.54□□□□□ -1.84
CRIM1-208ENST00000497236 NAP1L2Q9ULW6 460 aaPredicted RBP3.54□□□□□ -1.84
CRIM1-208ENST00000497236 KIF3AQ9Y496 699 aa3.54□□□□□ -1.84
CRIM1-208ENST00000497236 PTPN23Q9H3S7 1636 aa3.54□□□□□ -1.84
CRIM1-208ENST00000497236 THOC2Q8NI27 1593 aaKnown RBP3.54□□□□□ -1.84
CRIM1-208ENST00000497236 FGD5Q6ZNL6 1462 aa3.54□□□□□ -1.84
CRIM1-208ENST00000497236 ARHGAP31Q2M1Z3 1444 aa3.53□□□□□ -1.84
CRIM1-208ENST00000497236 UHRF1BP1Q6BDS2 1440 aa3.53□□□□□ -1.84
CRIM1-208ENST00000497236 YEATS2Q9ULM3 1422 aa3.53□□□□□ -1.84
CRIM1-208ENST00000497236 KIAA1107Q9UPP5 1409 aa3.53□□□□□ -1.84
CRIM1-208ENST00000497236 IGF1RP08069 1367 aa3.53□□□□□ -1.84
CRIM1-208ENST00000497236 CARMIL1Q5VZK9 1371 aa3.53□□□□□ -1.84
CRIM1-208ENST00000497236 CFAP43Q8NDM7 1665 aa3.53□□□□□ -1.84
CRIM1-208ENST00000497236 POTEFA5A3E0 1075 aa3.53□□□□□ -1.84
CRIM1-208ENST00000497236 PHF14O94880 888 aa3.53□□□□□ -1.84
CRIM1-208ENST00000497236 ZSCAN20P17040 1043 aaPredicted RBP3.53□□□□□ -1.84
CRIM1-208ENST00000497236 RGS3P49796 1198 aa3.53□□□□□ -1.84
CRIM1-208ENST00000497236 KIAA2012Q0VF49 1180 aa3.53□□□□□ -1.84
CRIM1-208ENST00000497236 CHAF1AQ13111 956 aaPredicted RBP3.53□□□□□ -1.84
CRIM1-208ENST00000497236 UVSSAQ2YD98 709 aa3.53□□□□□ -1.84
CRIM1-208ENST00000497236 PPP4R3BQ5MIZ7 849 aa3.53□□□□□ -1.84
CRIM1-208ENST00000497236 CAVIN1Q6NZI2 390 aaKnown RBP3.53□□□□□ -1.84
CRIM1-208ENST00000497236 C3orf67Q6ZVT6 689 aa3.53□□□□□ -1.84
CRIM1-208ENST00000497236 ILDR1Q86SU0 546 aaPredicted RBP3.53□□□□□ -1.84
CRIM1-208ENST00000497236 PDCD7Q8N8D1 485 aaKnown RBP3.53□□□□□ -1.84
CRIM1-208ENST00000497236 MYRIPQ8NFW9 859 aa3.53□□□□□ -1.84
CRIM1-208ENST00000497236 PDLIM2Q96JY6 352 aa3.53□□□□□ -1.84
CRIM1-208ENST00000497236 CRBNQ96SW2 442 aa3.53□□□□□ -1.84
CRIM1-208ENST00000497236 YY1AP1Q9H869 796 aa3.53□□□□□ -1.84
CRIM1-208ENST00000497236 FAM13BQ9NYF5 915 aa3.53□□□□□ -1.84
CRIM1-208ENST00000497236 CALCOCO1Q9P1Z2 691 aa3.53□□□□□ -1.84
CRIM1-208ENST00000497236 PHF8Q9UPP1 1060 aa3.53□□□□□ -1.84
CRIM1-208ENST00000497236 ZKSCAN5Q9Y2L8 839 aa3.53□□□□□ -1.84
CRIM1-208ENST00000497236 TCOF1Q13428 1488 aaKnown RBP3.53□□□□□ -1.84
CRIM1-208ENST00000497236 GAPVD1Q14C86 1478 aa3.53□□□□□ -1.84
CRIM1-208ENST00000497236 BLMP54132 1417 aaPredicted RBP3.53□□□□□ -1.85
CRIM1-208ENST00000497236 FHOD3Q2V2M9 1422 aa3.53□□□□□ -1.85
CRIM1-208ENST00000497236 PARD3Q8TEW0 1356 aa3.52□□□□□ -1.85
CRIM1-208ENST00000497236 HECW1Q76N89 1606 aa3.52□□□□□ -1.85
CRIM1-208ENST00000497236 UQCRHLA0A096LP55 91 aa3.52□□□□□ -1.85
CRIM1-208ENST00000497236 A0A0U1RQG5 324 aaPredicted RBP3.52□□□□□ -1.85
CRIM1-208ENST00000497236 E9PSI1 815 aa3.52□□□□□ -1.85
CRIM1-208ENST00000497236 UQCRHP07919 91 aa3.52□□□□□ -1.85
CRIM1-208ENST00000497236 BRD2P25440 801 aaKnown RBP3.52□□□□□ -1.85
CRIM1-208ENST00000497236 RIPK4P57078 832 aa3.52□□□□□ -1.85
CRIM1-208ENST00000497236 TEX2Q8IWB9 1127 aa3.52□□□□□ -1.85
CRIM1-208ENST00000497236 TRMT2AQ8IZ69 625 aaKnown RBP3.52□□□□□ -1.85
CRIM1-208ENST00000497236 SYAP1Q96A49 352 aaPredicted RBP3.52□□□□□ -1.85
CRIM1-208ENST00000497236 TBC1D2Q9BYX2 928 aa3.52□□□□□ -1.85
CRIM1-208ENST00000497236 DNAJC5Q9H3Z4 198 aa3.52□□□□□ -1.85
CRIM1-208ENST00000497236 EFCC1Q9HA90 598 aa3.52□□□□□ -1.85
CRIM1-208ENST00000497236 EIF2AK3Q9NZJ5 1116 aaKnown RBP3.52□□□□□ -1.85
CRIM1-208ENST00000497236 OGFRQ9NZT2 677 aa3.52□□□□□ -1.85
CRIM1-208ENST00000497236 BOLA1Q9Y3E2 137 aa3.52□□□□□ -1.85
CRIM1-208ENST00000497236 USP47Q96K76 1375 aa3.51□□□□□ -1.85
CRIM1-208ENST00000497236 NPC1L1Q9UHC9 1359 aa3.51□□□□□ -1.85
CRIM1-208ENST00000497236 ARHGEF12Q9NZN5 1544 aa3.51□□□□□ -1.85
CRIM1-208ENST00000497236 POTEB2H3BUK9 544 aa3.51□□□□□ -1.85
CRIM1-208ENST00000497236 MBD3O95983 291 aa3.51□□□□□ -1.85
CRIM1-208ENST00000497236 SLC4A3P48751 1232 aa3.51□□□□□ -1.85
CRIM1-208ENST00000497236 DHX8Q14562 1220 aaKnown RBP3.51□□□□□ -1.85
CRIM1-208ENST00000497236 RAB3GAP1Q15042 981 aa3.51□□□□□ -1.85
CRIM1-208ENST00000497236 DNTTIP2Q5QJE6 756 aaKnown RBP3.51□□□□□ -1.85
CRIM1-208ENST00000497236 CLUAP1Q96AJ1 413 aa3.51□□□□□ -1.85
CRIM1-208ENST00000497236 MFRPQ9BY79 579 aa3.51□□□□□ -1.85
CRIM1-208ENST00000497236 C22orf23Q9BZE7 217 aa3.51□□□□□ -1.85
CRIM1-208ENST00000497236 UHRF1BP1LA0JNW5 1464 aa3.51□□□□□ -1.85
CRIM1-208ENST00000497236 ATAD2Q6PL18 1390 aa3.51□□□□□ -1.85
CRIM1-208ENST00000497236 USP19O94966 1318 aa3.5□□□□□ -1.85
CRIM1-208ENST00000497236 TEX14Q8IWB6 1497 aa3.5□□□□□ -1.85
CRIM1-208ENST00000497236 ATAD2BQ9ULI0 1458 aa3.5□□□□□ -1.85
CRIM1-208ENST00000497236 TUBB4AP04350 444 aa3.5□□□□□ -1.85
CRIM1-208ENST00000497236 GTF2E1P29083 439 aaPredicted RBP3.5□□□□□ -1.85
CRIM1-208ENST00000497236 DDIT3P35638 169 aa3.5□□□□□ -1.85
CRIM1-208ENST00000497236 MFAP1P55081 439 aaKnown RBP3.5□□□□□ -1.85
CRIM1-208ENST00000497236 SLFN5Q08AF3 891 aa3.5□□□□□ -1.85
CRIM1-208ENST00000497236 WDR43Q15061 677 aaKnown RBP eCLIP3.5□□□□□ -1.85
CRIM1-208ENST00000497236 RNF20Q5VTR2 975 aa3.5□□□□□ -1.85
CRIM1-208ENST00000497236 DPY19L2Q6NUT2 758 aa3.5□□□□□ -1.85
CRIM1-208ENST00000497236 RPAINQ86UA6 219 aa3.5□□□□□ -1.85
CRIM1-208ENST00000497236 FBXO22Q8NEZ5 403 aa3.5□□□□□ -1.85
CRIM1-208ENST00000497236 TIGD1Q96MW7 591 aa3.5□□□□□ -1.85
CRIM1-208ENST00000497236 R3HCC1Q9Y3T6 440 aaKnown RBP3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms