RNA–Protein interactions for RNA: ENST00000494014.1

EPHA3-203, Transcript of EPH receptor A3, humanhuman

TSL 1 (best) BASIC

Gene EPHA3, Length 3,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-203ENST00000494014 HDGFP51858 240 aaKnown RBP9.37□□□□□ -0.91
EPHA3-203ENST00000494014 NUDCQ9Y266 331 aa9.37□□□□□ -0.91
EPHA3-203ENST00000494014 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.37□□□□□ -0.91
EPHA3-203ENST00000494014 TBX22Q9Y458 520 aa9.37□□□□□ -0.91
EPHA3-203ENST00000494014 HSPA1LP34931 641 aa9.37□□□□□ -0.91
EPHA3-203ENST00000494014 IDI1Q13907 227 aa9.37□□□□□ -0.91
EPHA3-203ENST00000494014 TXNDC2Q86VQ3 553 aa9.37□□□□□ -0.91
EPHA3-203ENST00000494014 RRP7BPQ9NSQ0 103 aa9.37□□□□□ -0.91
EPHA3-203ENST00000494014 KIF1BO60333 1816 aa9.37□□□□□ -0.91
EPHA3-203ENST00000494014 MRS2Q9HD23 443 aa9.36□□□□□ -0.91
EPHA3-203ENST00000494014 NEXMIFQ5QGS0 1516 aa9.36□□□□□ -0.91
EPHA3-203ENST00000494014 PRKRIP1Q9H875 184 aaPredicted RBP9.36□□□□□ -0.91
EPHA3-203ENST00000494014 FAM9BQ8IZU0 186 aa9.35□□□□□ -0.91
EPHA3-203ENST00000494014 KNDC1Q76NI1 1749 aa9.35□□□□□ -0.91
EPHA3-203ENST00000494014 NPM2Q86SE8 214 aaKnown RBP9.35□□□□□ -0.91
EPHA3-203ENST00000494014 IFT172Q9UG01 1749 aa9.34□□□□□ -0.91
EPHA3-203ENST00000494014 CLTCL1P53675 1640 aa9.34□□□□□ -0.91
EPHA3-203ENST00000494014 TMEM94Q12767 1356 aa9.34□□□□□ -0.91
EPHA3-203ENST00000494014 PDE4AP27815 886 aa9.34□□□□□ -0.91
EPHA3-203ENST00000494014 BACH2Q9BYV9 841 aa9.34□□□□□ -0.91
EPHA3-203ENST00000494014 PPLO60437 1756 aa9.34□□□□□ -0.91
EPHA3-203ENST00000494014 PTCH1Q13635 1447 aa9.33□□□□□ -0.92
EPHA3-203ENST00000494014 CDK12Q9NYV4 1490 aaPredicted RBP9.33□□□□□ -0.92
EPHA3-203ENST00000494014 NFKBIBQ15653 356 aa9.33□□□□□ -0.92
EPHA3-203ENST00000494014 CCDC184Q52MB2 194 aa9.33□□□□□ -0.92
EPHA3-203ENST00000494014 FRAT1Q92837 279 aaPredicted RBP9.33□□□□□ -0.92
EPHA3-203ENST00000494014 COL22A1Q8NFW1 1626 aaPredicted RBP9.32□□□□□ -0.92
EPHA3-203ENST00000494014 FAM50AQ14320 339 aaKnown RBP9.32□□□□□ -0.92
EPHA3-203ENST00000494014 MSH6P52701 1360 aa9.32□□□□□ -0.92
EPHA3-203ENST00000494014 HSPA5P11021 654 aaKnown RBP9.31□□□□□ -0.92
EPHA3-203ENST00000494014 EIF4G2P78344 907 aaKnown RBP eCLIP9.31□□□□□ -0.92
EPHA3-203ENST00000494014 HFM1A2PYH4 1435 aa9.31□□□□□ -0.92
EPHA3-203ENST00000494014 NALCNQ8IZF0 1738 aa9.3□□□□□ -0.92
EPHA3-203ENST00000494014 ZMYND15Q9H091 742 aa9.3□□□□□ -0.92
EPHA3-203ENST00000494014 CCDC7Q96M83 1385 aa9.3□□□□□ -0.92
EPHA3-203ENST00000494014 NAIPQ13075 1403 aa9.29□□□□□ -0.92
EPHA3-203ENST00000494014 JCADQ9P266 1359 aa9.29□□□□□ -0.92
EPHA3-203ENST00000494014 SPATA31A6Q5VVP1 1343 aa9.28□□□□□ -0.92
EPHA3-203ENST00000494014 VSIG10Q8N0Z9 540 aa9.28□□□□□ -0.92
EPHA3-203ENST00000494014 ASXL1Q8IXJ9 1541 aa9.28□□□□□ -0.92
EPHA3-203ENST00000494014 PTPRUQ92729 1446 aa9.28□□□□□ -0.92
EPHA3-203ENST00000494014 RRP9O43818 475 aaKnown RBP9.28□□□□□ -0.92
EPHA3-203ENST00000494014 CDC42BPGQ6DT37 1551 aa9.28□□□□□ -0.92
EPHA3-203ENST00000494014 DAXXQ9UER7 740 aaPredicted RBP9.28□□□□□ -0.92
EPHA3-203ENST00000494014 RPGRIP1LQ68CZ1 1315 aa9.27□□□□□ -0.93
EPHA3-203ENST00000494014 ADGRL3Q9HAR2 1447 aa9.27□□□□□ -0.93
EPHA3-203ENST00000494014 TECPR2O15040 1411 aa9.27□□□□□ -0.93
EPHA3-203ENST00000494014 MST1RQ04912 1400 aa9.26□□□□□ -0.93
EPHA3-203ENST00000494014 PODXL2Q9NZ53 605 aa9.26□□□□□ -0.93
EPHA3-203ENST00000494014 NUP155O75694 1391 aa9.25□□□□□ -0.93
EPHA3-203ENST00000494014 STAG3Q9UJ98 1225 aa9.25□□□□□ -0.93
EPHA3-203ENST00000494014 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.25□□□□□ -0.93
EPHA3-203ENST00000494014 MARF1Q9Y4F3 1742 aaKnown RBP9.25□□□□□ -0.93
EPHA3-203ENST00000494014 PIP4K2BP78356 416 aa9.24□□□□□ -0.93
EPHA3-203ENST00000494014 HSP90AA2PQ14568 343 aaPredicted RBP9.24□□□□□ -0.93
EPHA3-203ENST00000494014 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.24□□□□□ -0.93
EPHA3-203ENST00000494014 NRXN1Q9ULB1 1477 aa9.24□□□□□ -0.93
EPHA3-203ENST00000494014 KIF1AQ12756 1690 aa9.24□□□□□ -0.93
EPHA3-203ENST00000494014 L1TD1Q5T7N2 865 aaKnown RBP9.24□□□□□ -0.93
EPHA3-203ENST00000494014 CADPS2Q86UW7 1296 aa9.24□□□□□ -0.93
EPHA3-203ENST00000494014 PROSER2Q86WR7 435 aaPredicted RBP9.24□□□□□ -0.93
EPHA3-203ENST00000494014 RGS17Q9UGC6 210 aaPredicted RBP9.24□□□□□ -0.93
EPHA3-203ENST00000494014 RRP1P56182 461 aaKnown RBP9.23□□□□□ -0.93
EPHA3-203ENST00000494014 C19orf44Q9H6X5 657 aa9.23□□□□□ -0.93
EPHA3-203ENST00000494014 SLAIN2Q9P270 581 aa9.23□□□□□ -0.93
EPHA3-203ENST00000494014 CHIC2Q9UKJ5 165 aa9.23□□□□□ -0.93
EPHA3-203ENST00000494014 LRP6O75581 1613 aa9.23□□□□□ -0.93
EPHA3-203ENST00000494014 HSP90AA1P07900 732 aaKnown RBP9.22□□□□□ -0.93
EPHA3-203ENST00000494014 DCAF11Q8TEB1 546 aa9.22□□□□□ -0.93
EPHA3-203ENST00000494014 MYOM2P54296 1465 aa9.21□□□□□ -0.93
EPHA3-203ENST00000494014 ADGRB2O60241 1585 aa9.21□□□□□ -0.94
EPHA3-203ENST00000494014 FMN2Q9NZ56 1722 aa9.21□□□□□ -0.94
EPHA3-203ENST00000494014 SPATA31E1Q6ZUB1 1445 aa9.21□□□□□ -0.94
EPHA3-203ENST00000494014 DLC1Q96QB1 1528 aa9.2□□□□□ -0.94
EPHA3-203ENST00000494014 EXOC6Q8TAG9 804 aa9.2□□□□□ -0.94
EPHA3-203ENST00000494014 SLC26A8Q96RN1 970 aa9.19□□□□□ -0.94
EPHA3-203ENST00000494014 RRAGDQ9NQL2 400 aaPredicted RBP9.19□□□□□ -0.94
EPHA3-203ENST00000494014 SIRT1Q96EB6 747 aa9.19□□□□□ -0.94
EPHA3-203ENST00000494014 PNNQ9H307 717 aaKnown RBP9.19□□□□□ -0.94
EPHA3-203ENST00000494014 PHF23Q9BUL5 403 aaPredicted RBP9.18□□□□□ -0.94
EPHA3-203ENST00000494014 CLCN1P35523 988 aa9.18□□□□□ -0.94
EPHA3-203ENST00000494014 NAP1L5Q96NT1 182 aaPredicted RBP9.18□□□□□ -0.94
EPHA3-203ENST00000494014 METP08581 1390 aa9.18□□□□□ -0.94
EPHA3-203ENST00000494014 KIF7Q2M1P5 1343 aa9.18□□□□□ -0.94
EPHA3-203ENST00000494014 FRAT2O75474 233 aaPredicted RBP9.18□□□□□ -0.94
EPHA3-203ENST00000494014 C1orf167Q5SNV9 1468 aa9.18□□□□□ -0.94
EPHA3-203ENST00000494014 ANKRD30BQ9BXX2 1392 aa9.17□□□□□ -0.94
EPHA3-203ENST00000494014 PDE3BQ13370 1112 aa9.17□□□□□ -0.94
EPHA3-203ENST00000494014 RCAN3Q9UKA8 241 aa9.17□□□□□ -0.94
EPHA3-203ENST00000494014 PIK3C2GO75747 1445 aa9.17□□□□□ -0.94
EPHA3-203ENST00000494014 AMOTL2Q9Y2J4 779 aa9.16□□□□□ -0.94
EPHA3-203ENST00000494014 ZNF772Q68DY9 489 aaPredicted RBP9.16□□□□□ -0.94
EPHA3-203ENST00000494014 LRPPRCP42704 1394 aaKnown RBP9.16□□□□□ -0.94
EPHA3-203ENST00000494014 PNPLA6Q8IY17 1366 aa9.16□□□□□ -0.94
EPHA3-203ENST00000494014 BRINP3Q76B58 766 aa9.16□□□□□ -0.94
EPHA3-203ENST00000494014 PNISRQ8TF01 805 aaKnown RBP9.16□□□□□ -0.94
EPHA3-203ENST00000494014 PXDNQ92626 1479 aa9.15□□□□□ -0.94
EPHA3-203ENST00000494014 CENPJQ9HC77 1338 aaPredicted RBP9.15□□□□□ -0.94
EPHA3-203ENST00000494014 NWD2Q9ULI1 1742 aa9.15□□□□□ -0.94
EPHA3-203ENST00000494014 VGFO15240 615 aaPredicted RBP9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms