RNA–Protein interactions for RNA: ENST00000491541.1

SREBF2-208, Transcript of sterol regulatory element binding transcription factor 2, humanhuman

TSL 1 (best)

Gene SREBF2, Length 4,043 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2-208ENST00000491541 RIMBP3BA6NNM3 1639 aa13.52□□□□□ -0.25
SREBF2-208ENST00000491541 RIMBP3Q9UFD9 1639 aa13.52□□□□□ -0.25
SREBF2-208ENST00000491541 FAM161AQ3B820 660 aa13.52□□□□□ -0.25
SREBF2-208ENST00000491541 ARID3CA6NKF2 412 aa13.52□□□□□ -0.25
SREBF2-208ENST00000491541 TOPAZ1Q8N9V7 1692 aa13.51□□□□□ -0.25
SREBF2-208ENST00000491541 CHD2O14647 1828 aaKnown RBP13.5□□□□□ -0.25
SREBF2-208ENST00000491541 SLFN5Q08AF3 891 aa13.5□□□□□ -0.25
SREBF2-208ENST00000491541 PDE3AQ14432 1141 aa13.5□□□□□ -0.25
SREBF2-208ENST00000491541 NFKBIBQ15653 356 aa13.49□□□□□ -0.25
SREBF2-208ENST00000491541 EXOC6Q8TAG9 804 aa13.49□□□□□ -0.25
SREBF2-208ENST00000491541 ZNF692Q9BU19 519 aaPredicted RBP13.49□□□□□ -0.25
SREBF2-208ENST00000491541 NSD2O96028 1365 aa13.49□□□□□ -0.25
SREBF2-208ENST00000491541 DLC1Q96QB1 1528 aa13.49□□□□□ -0.25
SREBF2-208ENST00000491541 SLC24A1O60721 1099 aa13.48□□□□□ -0.25
SREBF2-208ENST00000491541 BRPF1P55201 1214 aaPredicted RBP13.48□□□□□ -0.25
SREBF2-208ENST00000491541 IL17RAQ96F46 866 aa13.47□□□□□ -0.25
SREBF2-208ENST00000491541 RRP7BPQ9NSQ0 103 aa13.47□□□□□ -0.25
SREBF2-208ENST00000491541 CDK12Q9NYV4 1490 aaPredicted RBP13.47□□□□□ -0.25
SREBF2-208ENST00000491541 NOS1P29475 1434 aa13.47□□□□□ -0.25
SREBF2-208ENST00000491541 TULP4Q9NRJ4 1543 aa13.47□□□□□ -0.25
SREBF2-208ENST00000491541 DLG5Q8TDM6 1919 aa13.47□□□□□ -0.25
SREBF2-208ENST00000491541 CLCN1P35523 988 aa13.45□□□□□ -0.26
SREBF2-208ENST00000491541 ZNF644Q9H582 1327 aaPredicted RBP13.45□□□□□ -0.26
SREBF2-208ENST00000491541 MAPK8IP3Q9UPT6 1336 aa13.45□□□□□ -0.26
SREBF2-208ENST00000491541 TRAPPC8Q9Y2L5 1435 aa13.44□□□□□ -0.26
SREBF2-208ENST00000491541 FBLN2P98095 1184 aa13.44□□□□□ -0.26
SREBF2-208ENST00000491541 SLC4A1APQ9BWU0 796 aaKnown RBP13.44□□□□□ -0.26
SREBF2-208ENST00000491541 ERCC6L2Q5T890 1561 aa13.43□□□□□ -0.26
SREBF2-208ENST00000491541 C3P01024 1663 aa13.43□□□□□ -0.26
SREBF2-208ENST00000491541 BRPF3Q9ULD4 1205 aa13.43□□□□□ -0.26
SREBF2-208ENST00000491541 RICTORQ6R327 1708 aa13.43□□□□□ -0.26
SREBF2-208ENST00000491541 CT47B1P0C2W7 299 aaPredicted RBP13.42□□□□□ -0.26
SREBF2-208ENST00000491541 PKD2Q13563 968 aa13.41□□□□□ -0.26
SREBF2-208ENST00000491541 CACNA1FO60840 1977 aa13.4□□□□□ -0.26
SREBF2-208ENST00000491541 ARHGAP5Q13017 1502 aa13.39□□□□□ -0.27
SREBF2-208ENST00000491541 TBC1D32Q96NH3 1257 aa13.39□□□□□ -0.27
SREBF2-208ENST00000491541 KIF24Q5T7B8 1368 aa13.39□□□□□ -0.27
SREBF2-208ENST00000491541 MED1Q15648 1581 aaPredicted RBP13.39□□□□□ -0.27
SREBF2-208ENST00000491541 DCAF11Q8TEB1 546 aa13.38□□□□□ -0.27
SREBF2-208ENST00000491541 PNPLA6Q8IY17 1366 aa13.38□□□□□ -0.27
SREBF2-208ENST00000491541 SNX21Q969T3 373 aa13.38□□□□□ -0.27
SREBF2-208ENST00000491541 ST20-MTHFSA0A0A6YYL1 179 aa13.37□□□□□ -0.27
SREBF2-208ENST00000491541 CD163L1Q9NR16 1453 aa13.37□□□□□ -0.27
SREBF2-208ENST00000491541 FRAT1Q92837 279 aaPredicted RBP13.37□□□□□ -0.27
SREBF2-208ENST00000491541 COL22A1Q8NFW1 1626 aaPredicted RBP13.37□□□□□ -0.27
SREBF2-208ENST00000491541 KIF16BQ96L93 1317 aa13.37□□□□□ -0.27
SREBF2-208ENST00000491541 ARXQ96QS3 562 aa13.36□□□□□ -0.27
SREBF2-208ENST00000491541 XRN1Q8IZH2 1706 aaKnown RBP13.36□□□□□ -0.27
SREBF2-208ENST00000491541 PTCH1Q13635 1447 aa13.36□□□□□ -0.27
SREBF2-208ENST00000491541 FMN2Q9NZ56 1722 aa13.36□□□□□ -0.27
SREBF2-208ENST00000491541 MLH3Q9UHC1 1453 aa13.36□□□□□ -0.27
SREBF2-208ENST00000491541 MARF1Q9Y4F3 1742 aaKnown RBP13.35□□□□□ -0.27
SREBF2-208ENST00000491541 CRBNQ96SW2 442 aa13.35□□□□□ -0.27
SREBF2-208ENST00000491541 FAM208AQ9UK61 1670 aaKnown RBP13.35□□□□□ -0.27
SREBF2-208ENST00000491541 PPP2R1AP30153 589 aa13.35□□□□□ -0.27
SREBF2-208ENST00000491541 PHRF1Q9P1Y6 1649 aaKnown RBP13.34□□□□□ -0.27
SREBF2-208ENST00000491541 MYO5BQ9ULV0 1848 aa13.34□□□□□ -0.27
SREBF2-208ENST00000491541 SPATA31D1Q6ZQQ2 1576 aa13.34□□□□□ -0.27
SREBF2-208ENST00000491541 DDX60Q8IY21 1712 aaKnown RBP13.34□□□□□ -0.27
SREBF2-208ENST00000491541 LMTK3Q96Q04 1460 aa13.34□□□□□ -0.27
SREBF2-208ENST00000491541 RBM25P49756 843 aaKnown RBP13.33□□□□□ -0.28
SREBF2-208ENST00000491541 HS1BP3Q53T59 392 aa13.33□□□□□ -0.28
SREBF2-208ENST00000491541 NRXN3Q9Y4C0 1643 aa13.33□□□□□ -0.28
SREBF2-208ENST00000491541 RRP9O43818 475 aaKnown RBP13.33□□□□□ -0.28
SREBF2-208ENST00000491541 L1TD1Q5T7N2 865 aaKnown RBP13.33□□□□□ -0.28
SREBF2-208ENST00000491541 PPP1R9BQ96SB3 815 aa13.33□□□□□ -0.28
SREBF2-208ENST00000491541 ZNF326Q5BKZ1 582 aaKnown RBP13.32□□□□□ -0.28
SREBF2-208ENST00000491541 IL16Q14005 1332 aa13.32□□□□□ -0.28
SREBF2-208ENST00000491541 SLC4A3P48751 1232 aa13.31□□□□□ -0.28
SREBF2-208ENST00000491541 TMC1Q8TDI8 760 aa13.31□□□□□ -0.28
SREBF2-208ENST00000491541 MYH15Q9Y2K3 1946 aa13.31□□□□□ -0.28
SREBF2-208ENST00000491541 CARD11Q9BXL7 1154 aa13.31□□□□□ -0.28
SREBF2-208ENST00000491541 HDAC1Q13547 482 aaPredicted RBP13.3□□□□□ -0.28
SREBF2-208ENST00000491541 CIZ1Q9ULV3 898 aaPredicted RBP13.3□□□□□ -0.28
SREBF2-208ENST00000491541 E9PSI1 815 aa13.3□□□□□ -0.28
SREBF2-208ENST00000491541 WDR63Q8IWG1 891 aa13.3□□□□□ -0.28
SREBF2-208ENST00000491541 CFDP1Q9UEE9 299 aaPredicted RBP13.3□□□□□ -0.28
SREBF2-208ENST00000491541 PTPRMP28827 1452 aa13.29□□□□□ -0.28
SREBF2-208ENST00000491541 FAM135BQ49AJ0 1406 aa13.29□□□□□ -0.28
SREBF2-208ENST00000491541 FOXD1Q16676 465 aa13.29□□□□□ -0.28
SREBF2-208ENST00000491541 GLIPR1L2Q4G1C9 344 aa13.29□□□□□ -0.28
SREBF2-208ENST00000491541 ABCC11Q96J66 1382 aa13.28□□□□□ -0.28
SREBF2-208ENST00000491541 SMC5Q8IY18 1101 aa13.27□□□□□ -0.28
SREBF2-208ENST00000491541 RRAGDQ9NQL2 400 aaPredicted RBP13.27□□□□□ -0.28
SREBF2-208ENST00000491541 PTMSP20962 102 aa13.27□□□□□ -0.29
SREBF2-208ENST00000491541 ADAMTS7Q9UKP4 1686 aa13.26□□□□□ -0.29
SREBF2-208ENST00000491541 CHIC2Q9UKJ5 165 aa13.26□□□□□ -0.29
SREBF2-208ENST00000491541 CDCA7LQ96GN5 454 aa13.26□□□□□ -0.29
SREBF2-208ENST00000491541 PKNOX2Q96KN3 472 aa13.26□□□□□ -0.29
SREBF2-208ENST00000491541 CD109Q6YHK3 1445 aa13.25□□□□□ -0.29
SREBF2-208ENST00000491541 CDCA8Q53HL2 280 aa13.25□□□□□ -0.29
SREBF2-208ENST00000491541 C20orf194Q5TEA3 1177 aa13.25□□□□□ -0.29
SREBF2-208ENST00000491541 DIP2CQ9Y2E4 1556 aa13.25□□□□□ -0.29
SREBF2-208ENST00000491541 TSPOAP1O95153 1857 aa13.25□□□□□ -0.29
SREBF2-208ENST00000491541 TMF1P82094 1093 aa13.24□□□□□ -0.29
SREBF2-208ENST00000491541 GOLGA2Q08379 1002 aa13.24□□□□□ -0.29
SREBF2-208ENST00000491541 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.24□□□□□ -0.29
SREBF2-208ENST00000491541 CAMTA1Q9Y6Y1 1673 aa13.24□□□□□ -0.29
SREBF2-208ENST00000491541 CPS1P31327 1500 aa13.23□□□□□ -0.29
SREBF2-208ENST00000491541 CPSF1Q10570 1443 aaKnown RBP13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms